Electron Microscopy Data Bank

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Validated Near-Atomic Resolution Structure of Bacteriophage Epsilon15 Derived from Cryo-EM and Modeling

Release date: July 10, 2013
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 3j40
Q-score: 0.323

Baker ML, Hryc CF, Zhang Q, Wu W, Jakana J, Haase-Pettingell C, Afonine PV, Adams PD, King JA, Jiang W, Chiu W

PNAS (2013) 110 pp. 12301-12306 [ Pubmed: 23840063 DOI: doi:10.1073/pnas.1309947110 ]

Sample:

Bacteriophage epsilon15 (22 MDa, Sample)
Salmonella phage epsilon15 (22 MDa, Virus from Salmonella phage epsilon15)

EMD-5377

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Direct electron detection yields cryo-EM reconstructions at resolutions beyond .75 Nyquist frequency

Release date: Oct. 24, 2012
Resolution: 7.9 Å
EM Method: Single-particle

Bammes BE, Rochat RH, Jakana J, Chen DH, Chiu W

J Struct Biol (2012) 177 pp. 589-601 [ Pubmed: 22285189 DOI: doi:10.1016/j.jsb.2012.01.008 ]

Sample:

EMD-5216

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Visualizing the structural changes of bacteriophage epsilon15 and its Salmonella host during infection

Release date: Oct. 11, 2010
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Haase-Pettingell C, Weigele PR, King JA, Chiu W

J Mol Biol (2010) 402 pp. 731-740 [ DOI: doi:10.1016/j.jmb.2010.07.058 Pubmed: 20709082 ]

Sample:

EMD-5217

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Visualizing the structural changes of bacteriophage epsilon15 and its Salmonella host during infection

Release date: Oct. 11, 2010
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Haase-Pettingell C, Weigele PR, King JA, Chiu W

J Mol Biol (2010) 402 pp. 731-740 [ DOI: doi:10.1016/j.jmb.2010.07.058 Pubmed: 20709082 ]

Sample:

EMD-5218

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Visualizing the structural changes of bacteriophage epsilon15 and its Salmonella host during infection

Release date: Oct. 11, 2010
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Haase-Pettingell C, Weigele PR, King JA, Chiu W

J Mol Biol (2010) 402 pp. 731-740 [ DOI: doi:10.1016/j.jmb.2010.07.058 Pubmed: 20709082 ]

Sample:

EMD-5219

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Visualizing the structural changes of bacteriophage epsilon15 and its Salmonella host during infection

Release date: Oct. 11, 2010
EM Method: Subtomogram averaging

Chang JT, Schmid MF, Haase-Pettingell C, Weigele PR, King JA, Chiu W

J Mol Biol (2010) 402 pp. 731-740 [ DOI: doi:10.1016/j.jmb.2010.07.058 Pubmed: 20709082 ]

Sample:

EMD-5003

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Icosahedral structure of bacteriophage epsilon15 at 4.5 Angstrom resolution

Release date: April 14, 2009
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 3c5b

Jiang W, Baker ML, Jakana J, Weigele PR, King J, Chiu W

Nature (2008) 451 pp. 1130-1134 [ DOI: doi:10.1038/nature06665 Pubmed: 18305544 ]

Sample:

Epsilon15 (22 MDa, Virus)
Bacteriophage epsilon15 (22 MDa, Sample)

EMD-1175

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Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus.

Release date: Nov. 3, 2006
Resolution: 20.0 Å
EM Method: Single-particle

Jiang W, Chang J, Jakana J, Weigele P, King J, Chiu W

Nature (2006) 439 pp. 612-616 [ Pubmed: 16452981 DOI: doi:10.1038/nature04487 ]

Sample:

Dsdna genome (DNA from Salmonella phage epsilon15)
Bacteriophage epsilon15 (500 kDa, Sample)
Tail hub (Protein from Salmonella phage epsilon15)
Salmonella phage epsilon15 (Virus from Salmonella phage epsilon15)
Tailspike (Protein from Salmonella phage epsilon15)
Core (Protein from Salmonella phage epsilon15)
Portal (Protein from Salmonella phage epsilon15)

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EMD-1176

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Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus.

Release date: Nov. 3, 2006
Resolution: 9.5 Å
EM Method: Single-particle

Jiang W, Chang J, Jakana J, Weigele P, King J, Chiu W

Nature (2006) 439 pp. 612-616 [ Pubmed: 16452981 DOI: doi:10.1038/nature04487 ]

Sample:

Bacteriophage epsilon15 (500 kDa, Sample)
Salmonella phage epsilon15 (Virus from Salmonella phage epsilon15)

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