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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"coiled coils" AND xref_links:"chebi" AND author_name:"H"

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EMD-35823

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Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm

Release date: July 5, 2023
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8iyj
Q-score: 0.35

Zhou L, Liu H, Liu S, Yang X, Dong Y, Pan Y, Xiao Z, Zheng B, Sun Y, Huang P, Zhang X, Hu J, Sun R, Feng S, Zhu Y, Liu M, Gui M, Wu J

Cell (2023) 186 pp. 2897-2910.e19 [ DOI: doi:10.1016/j.cell.2023.05.009 Pubmed: 37295417 ]

Sample:

Piercer of microtubule wall 2 protein (13 kDa, Protein from Mus musculus)
Tektin-4 (52 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 20 (22 kDa, Protein from Mus musculus)
Tubulin alpha-3 chain (50 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 141 (12 kDa, Protein from Mus musculus)
Guanosine-5'-diphosphate (443 Da, Ligand)
Cilia- and flagella-associated protein 52 (68 kDa, Protein from Mus musculus)
Testis-specific serine/threonine-protein kinase 6 (30 kDa, Protein from Mus musculus)
Tektin-2 (50 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 68 (19 kDa, Protein from Mus musculus)
Parkin coregulated gene protein homolog (27 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 107 (23 kDa, Protein from Mus musculus)
Nucleoside diphosphate kinase 7 (44 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 45 (65 kDa, Protein from Mus musculus)
Dual specificity phosphatase 21 (21 kDa, Protein from Mus musculus)
Outer dense fiber protein 3 (27 kDa, Protein from Mus musculus)
Ef-hand domain-containing family member b (95 kDa, Protein from Mus musculus)
Tektin-3 (56 kDa, Protein from Mus musculus)
Tektin bundle-interacting protein 1 (23 kDa, Protein from Mus musculus)
Protein fam166a (36 kDa, Protein from Mus musculus)
Uncharacterized protein c10orf82 homolog (25 kDa, Protein from Mus musculus)
Guanosine-5'-triphosphate (523 Da, Ligand)
Rib43a-like with coiled-coils protein 2 (45 kDa, Protein from Mus musculus)
Tektin-1 (48 kDa, Protein from Mus musculus)
Enkurin (29 kDa, Protein from Mus musculus)
Testis-expressed sequence 37 protein (21 kDa, Protein from Mus musculus)
Ef-hand domain-containing protein 1 (75 kDa, Protein from Mus musculus)
Tubulin beta-4b chain (49 kDa, Protein from Mus musculus)
Testis-expressed protein 43 (16 kDa, Protein from Mus musculus)
Mouse sperm dmt (Complex from Mus musculus)
Rib43a-like with coiled-coils protein 1 (45 kDa, Protein from Mus musculus)
Protein flattop (20 kDa, Protein from Mus musculus)
Protein phosphatase 1 regulatory subunit 32 (47 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 210 (65 kDa, Protein from Mus musculus)
Cilia and flagella-associated protein 77 (32 kDa, Protein from Mus musculus)
Ef-hand calcium-binding domain-containing protein 6 (176 kDa, Protein from Mus musculus)
Magnesium ion (24 Da, Ligand)
Coiled-coil domain-containing protein 105 (57 kDa, Protein from Mus musculus)
Sperm-associated antigen 8 (50 kDa, Protein from Mus musculus)
Meiosis-specific nuclear structural protein 1 (60 kDa, Protein from Mus musculus)
Ef-hand domain-containing family member c2 (87 kDa, Protein from Mus musculus)
Family with sequence similarity 183, member b (16 kDa, Protein from Mus musculus)
Tektin-5 (62 kDa, Protein from Mus musculus)
Spermatid-specific manchette-related protein 1 (29 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 276 (18 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 90 (20 kDa, Protein from Mus musculus)
Testis, prostate and placenta-expressed protein (24 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 95 (26 kDa, Protein from Mus musculus)
Piercer of microtubule wall 1 protein (18 kDa, Protein from Mus musculus)
Protein fam166c (23 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 53 (62 kDa, Protein from Mus musculus)
Testis expressed 49 (15 kDa, Protein from Mus musculus)
Cilia- and flagella-associated protein 161 (34 kDa, Protein from Mus musculus)

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EMD-24664

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Composite cryo-EM density map of the 48-nm repeat doublet microtubule from bovine tracheal cilia

Release date: Oct. 27, 2021
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7rro

Gui M, Farley H, Anujan P, Anderson JR, Maxwell DW, Whitchurch JB, Botsch JJ, Qiu T, Meleppattu S, Singh SK, Zhang Q, Thompson J, Lucas JS, Bingle CD, Norris DP, Roy S, Brown A

Cell (2021) 184 pp. 5791- [ DOI: doi:10.1016/j.cell.2021.10.007 Pubmed: 34715025 ]

Sample:

Tektip1 (24 kDa, Protein from Bos taurus)
Guanosine-5'-diphosphate (443 Da, Ligand)
Cilia and flagella associated protein 161 (36 kDa, Protein from Bos taurus)
Tektin-1 (48 kDa, Protein from Bos taurus)
Cilia and flagella associated protein 52 (68 kDa, Protein from Bos taurus)
Protein flattop (21 kDa, Protein from Bos taurus)
Tubulin beta-4b chain (49 kDa, Protein from Bos taurus)
Sperm associated antigen 8 (51 kDa, Protein from Bos taurus)
Outer dynein arm-docking complex subunit 3 (72 kDa, Protein from Bos taurus)
Coiled-coil domain containing 173 (65 kDa, Protein from Bos taurus)
Tektin-3 (56 kDa, Protein from Bos taurus)
Uncharacterized protein c1orf158 homolog (23 kDa, Protein from Bos taurus)
Tubulin alpha-1d chain (50 kDa, Protein from Bos taurus)
Ef-hand calcium-binding domain-containing protein 1 (24 kDa, Protein from Bos taurus)
Pierce1 (15 kDa, Protein from Bos taurus)
Guanosine-5'-triphosphate (523 Da, Ligand)
Pierce2 (13 kDa, Protein from Bos taurus)
Protein fam166b (30 kDa, Protein from Bos taurus)
Efcab6 (172 kDa, Protein from Bos taurus)
Doublet microtubule (Complex from Bos taurus)
Coiled-coil domain containing 114 (77 kDa, Protein from Bos taurus)
Armadillo repeat containing 4 (116 kDa, Protein from Bos taurus)
Uncharacterized protein c1orf189 homolog (12 kDa, Protein from Bos taurus)
Ef-hand domain containing 1 (74 kDa, Protein from Bos taurus)
Protein c9orf135 homolog (26 kDa, Protein from Bos taurus)
Rib43a-like with coiled-coils protein 2 (44 kDa, Protein from Bos taurus)
Pacrg protein (29 kDa, Protein from Bos taurus)
Enkurin, trpc channel interacting protein (30 kDa, Protein from Bos taurus)
Efhc2 (85 kDa, Protein from Bos taurus)
Ttc25 protein (78 kDa, Protein from Bos taurus)
Magnesium ion (24 Da, Ligand)
Tektin-2 (49 kDa, Protein from Bos taurus)
Tektin-4 (52 kDa, Protein from Bos taurus)
Cilia and flagella associated protein 45 (65 kDa, Protein from Bos taurus)
Cilia- and flagella-associated protein 20 (22 kDa, Protein from Bos taurus)
Ef-hand domain family member b (97 kDa, Protein from Bos taurus)
Methyl-cpg binding domain protein 1 (62 kDa, Protein from Bos taurus)
Nucleoside diphosphate kinase 7 (42 kDa, Protein from Bos taurus)
Chromosome 3 c1orf194 homolog (19 kDa, Protein from Bos taurus)
Meiosis-specific nuclear structural protein 1 (60 kDa, Protein from Bos taurus)

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EMDB [2]

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