Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ext
Q-score: 0.11
Zheng L, Zheng Z, Li X, Wang G, Zhang K, Wei P, Zhao J, Gao N
Nat Commun (2021) 12 pp. 5497-5497 [ DOI: doi:10.1038/s41467-021-25813-y Pubmed: 34535665 ]
- Phycobilisome 32.3 kda linker polypeptide, phycocyanin-associated, rod (32 kDa, Protein from Synechococcus sp. PCC 7002)
- Allophycocyanin alpha subunit (17 kDa, Protein from Synechococcus sp. PCC 7002)
- C-phycocyanin subunit alpha (17 kDa, Protein from Synechococcus sp. PCC 7002)
- Phycocyanobilin (588 Da, Ligand)
- Phycobilisome rod-core linker polypeptide cpcg (28 kDa, Protein from Synechococcus sp. PCC 7002)
- Phycobiliprotein apce (99 kDa, Protein from Synechococcus sp. PCC 7002)
- Cryo-em structure of cyanobacterial phycobilisome from synechococcus sp. pcc 7002 (6 MDa, Complex from Synechococcus sp. PCC 7002)
- Allophycocyanin subunit alpha-b (17 kDa, Protein from Synechococcus sp. PCC 7002)
- C-phycocyanin subunit beta (18 kDa, Protein from Synechococcus sp. PCC 7002)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (7 kDa, Protein from Synechococcus sp. PCC 7002)
- Allophycocyanin beta subunit (17 kDa, Protein from Synechococcus sp. PCC 7002)
- Allophycocyanin subunit beta-18 (18 kDa, Protein from Synechococcus sp. PCC 7002)
Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7eyd
Q-score: 0.171
Zheng L, Zheng Z, Li X, Wang G, Zhang K, Wei P, Zhao J, Gao N
Nat Commun (2021) 12 pp. 5497-5497 [ DOI: doi:10.1038/s41467-021-25813-y Pubmed: 34535665 ]
- Phycobilisome rod-core linker polypeptide cpcg1 (31 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Allophycocyanin subunit alpha 1 (17 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Allophycocyanin subunit beta-18 (18 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- C-phycocyanin alpha subunit (17 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Phycobilisome 32.1 kda linker polypeptide, phycocyanin-associated, rod (32 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Allophycocyanin subunit beta (17 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Allophycocyanin subunit alpha-b (17 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Phycobilisome rod-core linker polypeptide cpcg4 (29 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Phycocyanobilin (588 Da, Ligand)
- Phycobilisome rod-core linker polypeptide cpcg2 (28 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Phycobilisome 7.8 kda linker polypeptide, allophycocyanin-associated, core (7 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Phycobiliprotein apce (127 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- C-phycocyanin beta subunit (18 kDa, Protein from Nostoc sp. PCC 7120 = FACHB-418)
- Cryo-em structure of cyanobacterial phycobilisome from anabaena sp. pcc 7120 (7 MDa, Complex from Nostoc sp. PCC 7120 = FACHB-418)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6t9k
Q-score: 0.473
Wang H, Dienemann C, Stutzer A, Urlaub H, Cheung ACM, Cramer P
Nature (2020) 577 pp. 717-720 [ DOI: doi:10.1038/s41586-020-1933-5 Pubmed: 31969703 ]
- Transcriptional coactivator hfi1/ada1 (54 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Transcription initiation factor tfiid subunit 12 (61 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Transcription initiation factor tfiid subunit 6 (57 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Saga-associated factor 73 (72 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Transcription initiation factor tfiid subunit 9 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Transcriptional activator spt7 (152 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Transcription initiation factor tfiid subunit 10 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Unassigned sequence (11 kDa, Protein from Saccharomyces cerevisiae S288C)
- Transcription initiation factor tfiid subunit 5 (89 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Protein spt3 (38 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Saga core module (500 kDa, Complex from Saccharomyces cerevisiae S288C)
- Transcription factor spt20 (67 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Structure of the phycobilisome from the red alga Porphyridium purpureum
Ma JF, You X, Sun S, Wang XX, Qin S, Sui SF
Nature (2020) 579 pp. 146-151 [ DOI: doi:10.1038/s41586-020-2020-7 Pubmed: 32076272 ]
- Lrc4 (16 kDa, Protein from Red alga)
- Lr9 (31 kDa, Protein from Red alga)
- Lr4 (31 kDa, Protein from Red alga)
- Lr3 (37 kDa, Protein from Red alga)
- Lr1 (39 kDa, Protein from Red alga)
- Allophycocyanin beta subunit (17 kDa, Protein from Red alga)
- Lr5 (29 kDa, Protein from Red alga)
- Lr2_hb (43 kDa, Protein from Red alga)
- Lrc6 (26 kDa, Protein from Red alga)
- Allophycocyanin beta 18 subunit (19 kDa, Protein from Red alga)
- Lrc3 (55 kDa, Protein from Red alga)
- Phycoerythrin alpha subunit (17 kDa, Protein from Red alga)
- C-phycocyanin alpha subunit (17 kDa, Protein from Red alga)
- B-phycoerythrin beta chain (18 kDa, Protein from Red alga)
- Lr8 (31 kDa, Protein from Red alga)
- C-phycocyanin beta subunit (18 kDa, Protein from Red alga)
- Lrc2 (53 kDa, Protein from Red alga)
- Allophycocyanin alpha subunit (17 kDa, Protein from Red alga)
- Phycoerythrobilin (588 Da, Ligand)
- Lr2 (32 kDa, Protein from Red alga)
- Lr7 (36 kDa, Protein from Red alga)
- Phycobilisome rod-core linker polypeptide (26 kDa, Protein from Red alga)
- Complex of phycobilisome from red alga p.purpureum. (Complex from Porphyridium purpureum)
- Phycocyanobilin (588 Da, Ligand)
- Allophycocyanin gamma subunit (18 kDa, Protein from Red alga)
- Lc (10 kDa, Protein from Red alga)
- Lrc5 (30 kDa, Protein from Red alga)
- Phycourobilin (590 Da, Ligand)
- Phycobilisome linker polypeptide (99 kDa, Protein from Red alga)