Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7syq
Q-score: 0.396
Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J
EMBO J (2022) 41 pp. e110581-e110581 [ Pubmed: 35822879 DOI: doi:10.15252/embj.2022110581 ]
- Es1 (30 kDa, Protein from Oryctolagus cuniculus)
- Es8 (24 kDa, Protein from Oryctolagus cuniculus)
- Us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Us4 (22 kDa, Protein from Oryctolagus cuniculus)
- Es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Es12 (14 kDa, Protein from Oryctolagus cuniculus)
- Us7 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal small subunit with hcv ires (2 MDa, Complex)
- Es30 (14 kDa, Protein from Oryctolagus cuniculus)
- Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
- Us3 (31 kDa, Protein from Oryctolagus cuniculus)
- Us2 (sa) (32 kDa, Protein from Oryctolagus cuniculus)
- Us5 (24 kDa, Protein from Oryctolagus cuniculus)
- Us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Es26 (11 kDa, Protein from Oryctolagus cuniculus)
- Us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Es25 (13 kDa, Protein from Oryctolagus cuniculus)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- Es10 (17 kDa, Protein from Oryctolagus cuniculus)
- Es7 (47 kDa, Protein from Oryctolagus cuniculus)
- Us12 (15 kDa, Protein from Oryctolagus cuniculus)
- Es31 (21 kDa, Protein from Oryctolagus cuniculus)
- Es6 (28 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Us11 (18 kDa, Protein from Oryctolagus cuniculus)
- Es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- Us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Es24 (15 kDa, Protein from Oryctolagus cuniculus)
- El41 (3 kDa, Protein from Oryctolagus cuniculus)
- Es27 (9 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Receptor for activated c kinase 1 (rack1) (35 kDa, Protein from Oryctolagus cuniculus)
- Es4 (s4 x isoform) (29 kDa, Protein from Oryctolagus cuniculus)
- Us17 (18 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7syr
Q-score: 0.347
Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J
EMBO J (2022) 41 pp. e110581-e110581 [ Pubmed: 35822879 DOI: doi:10.15252/embj.2022110581 ]
- Es1 (30 kDa, Protein from Oryctolagus cuniculus)
- Es8 (24 kDa, Protein from Oryctolagus cuniculus)
- Us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Us4 (22 kDa, Protein from Oryctolagus cuniculus)
- Es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Es12 (14 kDa, Protein from Oryctolagus cuniculus)
- Us7 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal small subunit with hcv ires (2 MDa, Complex)
- Es30 (14 kDa, Protein from Oryctolagus cuniculus)
- Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
- Us3 (31 kDa, Protein from Oryctolagus cuniculus)
- Us2 (sa) (32 kDa, Protein from Oryctolagus cuniculus)
- Us5 (24 kDa, Protein from Oryctolagus cuniculus)
- Us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Es26 (11 kDa, Protein from Oryctolagus cuniculus)
- Us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Es25 (13 kDa, Protein from Oryctolagus cuniculus)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- Es10 (17 kDa, Protein from Oryctolagus cuniculus)
- Es7 (47 kDa, Protein from Oryctolagus cuniculus)
- Us12 (15 kDa, Protein from Oryctolagus cuniculus)
- Es31 (21 kDa, Protein from Oryctolagus cuniculus)
- Es6 (28 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Us11 (18 kDa, Protein from Oryctolagus cuniculus)
- Es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Met-trna-i-met (24 kDa, RNA from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- Us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Es24 (15 kDa, Protein from Oryctolagus cuniculus)
- El41 (3 kDa, Protein from Oryctolagus cuniculus)
- Es27 (9 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Receptor for activated c kinase 1 (rack1) (35 kDa, Protein from Oryctolagus cuniculus)
- Es4 (s4 x isoform) (29 kDa, Protein from Oryctolagus cuniculus)
- Us17 (18 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Homo sapiens)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7sys
Q-score: 0.469
Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J
EMBO J (2022) 41 pp. e110581-e110581 [ Pubmed: 35822879 DOI: doi:10.15252/embj.2022110581 ]
- Es1 (30 kDa, Protein from Oryctolagus cuniculus)
- Es8 (24 kDa, Protein from Oryctolagus cuniculus)
- Us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Us4 (22 kDa, Protein from Oryctolagus cuniculus)
- Es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Es12 (14 kDa, Protein from Oryctolagus cuniculus)
- Us7 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal small subunit with hcv ires (2 MDa, Complex)
- Es30 (14 kDa, Protein from Oryctolagus cuniculus)
- Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
- Us3 (31 kDa, Protein from Oryctolagus cuniculus)
- Us2 (sa) (32 kDa, Protein from Oryctolagus cuniculus)
- Us5 (24 kDa, Protein from Oryctolagus cuniculus)
- Us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Es26 (11 kDa, Protein from Oryctolagus cuniculus)
- Us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Es25 (13 kDa, Protein from Oryctolagus cuniculus)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- Es10 (17 kDa, Protein from Oryctolagus cuniculus)
- Es7 (47 kDa, Protein from Oryctolagus cuniculus)
- Us12 (15 kDa, Protein from Oryctolagus cuniculus)
- Es31 (21 kDa, Protein from Oryctolagus cuniculus)
- Es6 (28 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Us11 (18 kDa, Protein from Oryctolagus cuniculus)
- Es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Met-trna-i-met (24 kDa, RNA from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- Us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Es24 (15 kDa, Protein from Oryctolagus cuniculus)
- El41 (3 kDa, Protein from Oryctolagus cuniculus)
- Es27 (9 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Receptor for activated c kinase 1 (rack1) (35 kDa, Protein from Oryctolagus cuniculus)
- Es4 (s4 x isoform) (29 kDa, Protein from Oryctolagus cuniculus)
- Us17 (18 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Homo sapiens)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7syv
Q-score: 0.347
Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J
EMBO J (2022) 41 pp. e110581-e110581 [ Pubmed: 35822879 DOI: doi:10.15252/embj.2022110581 ]
- Es1 (30 kDa, Protein from Oryctolagus cuniculus)
- Es8 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s2 (24 kDa, Protein from Oryctolagus cuniculus)
- Us4 (22 kDa, Protein from Oryctolagus cuniculus)
- Es17 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal small subunit with hcv ires (2 MDa, Complex from Oryctolagus cuniculus)
- Es29 (6 kDa, Protein from Oryctolagus cuniculus)
- Es12 (14 kDa, Protein from Oryctolagus cuniculus)
- Us7 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Es30 (14 kDa, Protein from Oryctolagus cuniculus)
- Us3 (31 kDa, Protein from Oryctolagus cuniculus)
- Us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Es26 (11 kDa, Protein from Oryctolagus cuniculus)
- Es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Es10 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Us12 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- Es6 (28 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 5b (70 kDa, Protein from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Us11 (18 kDa, Protein from Oryctolagus cuniculus)
- Es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Met-trna-i-met (24 kDa, RNA from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Es27 (9 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Hcv ires (128 kDa, RNA from hepatitis C virus genotype 1a)
- 40s ribosomal protein s21 (9 kDa, Protein from Oryctolagus cuniculus)
- Rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- Sodium ion (22 Da, Ligand)
- 40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
- Us17 (18 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7syx
Q-score: 0.407
Brown ZP, Abaeva IS, De S, Hellen CUT, Pestova TV, Frank J
EMBO J (2022) 41 pp. e110581-e110581 [ Pubmed: 35822879 DOI: doi:10.15252/embj.2022110581 ]
- Es1 (30 kDa, Protein from Oryctolagus cuniculus)
- Es8 (24 kDa, Protein from Oryctolagus cuniculus)
- Es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Us4 (22 kDa, Protein from Oryctolagus cuniculus)
- Es17 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
- Es29 (6 kDa, Protein from Oryctolagus cuniculus)
- Es12 (14 kDa, Protein from Oryctolagus cuniculus)
- Us7 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal small subunit with hcv ires (2 MDa, Complex)
- Es30 (14 kDa, Protein from Oryctolagus cuniculus)
- Hcv ires (128 kDa, RNA from Hepatitis C virus (isolate 1))
- Us3 (31 kDa, Protein from Oryctolagus cuniculus)
- Es26 (11 kDa, Protein from Oryctolagus cuniculus)
- Us5 (24 kDa, Protein from Oryctolagus cuniculus)
- Us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Es10 (17 kDa, Protein from Oryctolagus cuniculus)
- Us12 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- Es6 (28 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 5b (70 kDa, Protein from Oryctolagus cuniculus)
- Us11 (18 kDa, Protein from Oryctolagus cuniculus)
- Es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Met-trna-i-met (24 kDa, RNA from Oryctolagus cuniculus)
- Es4 (29 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Es27 (9 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- Us17 (18 kDa, Protein from Oryctolagus cuniculus)
- Us2 (32 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6gz3
Q-score: 0.365
Flis J, Holm M, Rundlet EJ, Loerke J, Hilal T, Dabrowski M, Burger J, Mielke T, Blanchard SC, Spahn CMT, Budkevich TV
Cell Rep (2018) 25 pp. 2676-2688.e7 [ DOI: doi:10.1016/j.celrep.2018.11.040 Pubmed: 30517857 ]
- Ribosomal protein el29 (7 kDa, Protein from Rabbit)
- Ribosomal protein s27a (8 kDa, Protein from Rabbit)
- Ribosomal protein el21 (18 kDa, Protein from Rabbit)
- Ribosomal protein el43 (10 kDa, Protein from Rabbit)
- Ribosomal protein es19 (15 kDa, Protein from Rabbit)
- Ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Rabbit)
- Ribosomal protein es4 (28 kDa, Protein from Rabbit)
- Ribosomal protein el42 (12 kDa, Protein from Rabbit)
- Ribosomal protein el30 (11 kDa, Protein from Rabbit)
- Mrna (3 kDa, RNA from Enterobacteria phage SP6)
- Ribosomal protein s23 (15 kDa, Protein from Rabbit)
- Ribosomal protein el36 (11 kDa, Protein from Rabbit)
- Ribosomal protein el6 (22 kDa, Protein from Rabbit)
- Ribosomal protein us2 (24 kDa, Protein from Rabbit)
- Ribosomal protein l12 (16 kDa, Protein from Rabbit)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s6 (26 kDa, Protein from Rabbit)
- Ribosomal protein ul10 (22 kDa, Protein from Rabbit)
- Ribosomal protein el8 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es17 (14 kDa, Protein from Rabbit)
- 28s ribosomal rna (1 MDa, RNA from Rabbit)
- 40s ribosomal protein s12 (13 kDa, Protein from Rabbit)
- Ribosomal protein es24 (14 kDa, Protein from Rabbit)
- Ribosomal protein es26 (11 kDa, Protein from Rabbit)
- Ribosomal protein el13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul3 (45 kDa, Protein from Rabbit)
- Ribosomal protein el24 (14 kDa, Protein from Rabbit)
- 5s ribosomal rna (38 kDa, RNA from Rabbit)
- 60s ribosomal protein l27 (15 kDa, Protein from Rabbit)
- Ap/p-site trna (24 kDa, RNA from Rabbit)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Rabbit)
- 40s ribosomal protein s3a (24 kDa, Protein from Rabbit)
- Ribosomal protein s28 (7 kDa, Protein from Rabbit)
- Ribosomal protein ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Rabbit)
- Ribosomal protein es30 (6 kDa, Protein from Rabbit)
- Ribosomal protein ul4 (41 kDa, Protein from Rabbit)
- Ribosomal protein el31 (12 kDa, Protein from Rabbit)
- Translocation intermediate ti-post-1 (4 MDa, Complex)
- Ribosomal protein l26 (15 kDa, Protein from Rabbit)
- Ribosomal protein us5 (24 kDa, Protein from Rabbit)
- Ribosomal protein l10 (predicted) (24 kDa, Protein from Rabbit)
- Trna (Complex from Saccharomyces cerevisiae)
- Ribosomal protein (24 kDa, Protein from Rabbit)
- Ribosomal protein us10 (11 kDa, Protein from Rabbit)
- Ribosomal protein us9 (15 kDa, Protein from Rabbit)
- Ribosomal protein ul30 (27 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (9 kDa, Protein from Rabbit)
- Eukaryotic elongation factor 2 (eef2) (95 kDa, Protein from Rabbit)
- Ribosomal protein es27 (9 kDa, Protein from Rabbit)
- Ribosomal protein el34 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Rabbit)
- Ribosomal protein ul13 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Rabbit)
- Mrna (Complex from Enterobacteria phage SP6)
- Ribosomal protein s5 (21 kDa, Protein from Rabbit)
- Ribosomal protein us11 (14 kDa, Protein from Rabbit)
- Ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el28 (13 kDa, Protein from Rabbit)
- Ribosome (Complex from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Rabbit)
- Ribosomal protein el32 (15 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein us3 (24 kDa, Protein from Rabbit)
- Ribosomal protein us19 (14 kDa, Protein from Rabbit)
- Ribosomal protein el41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es21 (8 kDa, Protein from Rabbit)
- Ribosomal protein us14 (6 kDa, Protein from Rabbit)
- Pe/e-site-trna (24 kDa, RNA from Saccharomyces cerevisiae)
- 18s ribosomal rna (551 kDa, RNA from Rabbit)
- Ribosomal protein el22 (11 kDa, Protein from Oryctolagus cuniculus)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- Ribosomal protein es10 (11 kDa, Protein from Rabbit)
- Ribosomal protein es8 (24 kDa, Protein from Rabbit)
- Ribosomal protein l23 (13 kDa, Protein from Rabbit)
- Ribosomal protein l8 (27 kDa, Protein from Rabbit)
- 40s ribosomal protein s7 (20 kDa, Protein from Rabbit)
- Ribosomal protein ul6 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Rabbit)
- Ribosomal protein s11 (17 kDa, Protein from Rabbit)
- Ribosomal protein rack 1 (34 kDa, Protein from Rabbit)
- Ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el40 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el14 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Rabbit)
- Ribosomal protein ul15 (16 kDa, Protein from Rabbit)
- Ribosomal protein el33 (12 kDa, Protein from Rabbit)
- Ribosomal protein ul23 (13 kDa, Protein from Rabbit)
- Ribosomal protein es25 (9 kDa, Protein from Rabbit)
- Ribosomal protein ul18 (34 kDa, Protein from Rabbit)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6gz4
Q-score: 0.386
Flis J, Holm M, Rundlet EJ, Loerke J, Hilal T, Dabrowski M, Burger J, Mielke T, Blanchard SC, Spahn CMT, Budkevich TV
Cell Rep (2018) 25 pp. 2676-2688.e7 [ DOI: doi:10.1016/j.celrep.2018.11.040 Pubmed: 30517857 ]
- Ribosomal protein el42 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul5 (19 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el27 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (551 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein ul10 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es21 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul2 (27 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us10 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us3 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el24 (14 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ti-post-2 (4 MDa, Complex from Oryctolagus cuniculus)
- Ribosomal protein ul16 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul18 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el8 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es12 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el21 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us19 (14 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein el13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul23 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el31 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us10 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul24 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el28 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us4 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es8 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es17 (14 kDa, Protein from Oryctolagus cuniculus)
- Pe/e-site-trna (24 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el36 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul30 (27 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el34 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el37 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul13 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el15 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es24 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el6 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack 1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul14 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- Ap/p-site trna (24 kDa, RNA from Oryctolagus cuniculus)
- Eukaryotic elongation factor 2 (eef2) (95 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein el32 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es7 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us11 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us2 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el22 (11 kDa, Protein from Oryctolagus cuniculus)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- Ribosomal protein es30 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el29 (7 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es6 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el30 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Mrna (3 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein es4 (28 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es27 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul6 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es1 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es10 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us17 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul1 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el40 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el14 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul11 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el33 (12 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6gz5
Q-score: 0.38
Flis J, Holm M, Rundlet EJ, Loerke J, Hilal T, Dabrowski M, Burger J, Mielke T, Blanchard SC, Spahn CMT, Budkevich TV
Cell Rep (2018) 25 pp. 2676-2688.e7 [ DOI: doi:10.1016/j.celrep.2018.11.040 Pubmed: 30517857 ]
- Ribosomal protein es6 (26 kDa, Protein from rabbit)
- Ribosomal protein es21 (8 kDa, Protein from rabbit)
- Ribosomal protein us17 (17 kDa, Protein from rabbit)
- Ribosomal protein es7 (20 kDa, Protein from rabbit)
- Translocation intermediate ti-post-3 (Complex from Oryctolagus cuniculus)
- Ribosomal protein ul14 (13 kDa, Protein from rabbit)
- Ribosomal protein el42 (12 kDa, Protein from rabbit)
- Ribosomal protein us14 (6 kDa, Protein from Enterobacteria phage SP6)
- Ribosomal protein rack 1 (34 kDa, Protein from rabbit)
- Ribosomal protein el39 (6 kDa, Protein from rabbit)
- Ribosomal protein el20 (20 kDa, Protein from rabbit)
- Ribosomal protein el37 (9 kDa, Protein from rabbit)
- Ribosomal protein es1 (24 kDa, Protein from rabbit)
- Ribosomal protein ul10 (22 kDa, Protein from rabbit)
- Ribosomal protein el36 (11 kDa, Protein from rabbit)
- Ribosomal protein es24 (14 kDa, Protein from rabbit)
- Ribosomal protein us3 (24 kDa, Protein from rabbit)
- Ribosomal protein us9 (15 kDa, Protein from rabbit)
- Ribosomal protein es28 (7 kDa, Protein from rabbit)
- 5s ribosomal rna (38 kDa, RNA from rabbit)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein el19 (21 kDa, Protein from rabbit)
- Ribosomal protein us12 (15 kDa, Protein from rabbit)
- Ribosomal protein el29 (7 kDa, Protein from rabbit)
- Ribosomal protein el22 (11 kDa, Protein from rabbit)
- Translocation intermediate ti-post-3 (4 MDa, Complex)
- Ribosomal protein ul29 (14 kDa, Protein from rabbit)
- Ribosomal protein ul3 (45 kDa, Protein from rabbit)
- Ribosomal protein es8 (24 kDa, Protein from rabbit)
- Ribosomal protein es10 (11 kDa, Protein from rabbit)
- Ribosomal protein ul16 (24 kDa, Protein from rabbit)
- Ribosomal protein ul11 (16 kDa, Protein from rabbit)
- Ribosomal protein ul5 (19 kDa, Protein from rabbit)
- Ribosomal protein us7 (21 kDa, Protein from rabbit)
- Ribosomal protein us13 (16 kDa, Protein from rabbit)
- 5.8s ribosomal rna (50 kDa, RNA from rabbit)
- P/p-site-trna (24 kDa, RNA from rabbit)
- Ribosomal protein el6 (22 kDa, Protein from rabbit)
- Ribosomal protein el40 (5 kDa, Protein from rabbit)
- Ribosomal protein ul23 (13 kDa, Protein from rabbit)
- Ribosomal protein el18 (21 kDa, Protein from rabbit)
- Ribosomal protein ul6 (21 kDa, Protein from rabbit)
- Ribosomal protein es26 (11 kDa, Protein from rabbit)
- Ribosomal protein ul15 (16 kDa, Protein from rabbit)
- Ribosomal protein el21 (18 kDa, Protein from rabbit)
- Ribosomal protein us15 (17 kDa, Protein from rabbit)
- Ribosomal protein us10 (11 kDa, Protein from rabbit)
- Eukaryotic elongation factor 2 (eef2) (95 kDa, Protein from rabbit)
- Ribosomal protein el33 (12 kDa, Protein from rabbit)
- Ribosomal protein us5 (24 kDa, Protein from rabbit)
- 18s ribosomal rna (551 kDa, RNA from rabbit)
- Translocation intermediate ti-post-3 (Complex from Enterobacteria phage SP6)
- Ribosomal protein el41 (3 kDa, Protein from rabbit)
- Ribosomal protein ul30 (27 kDa, Protein from rabbit)
- Ribosomal protein us8 (14 kDa, Protein from rabbit)
- Ribosomal protein ul24 (15 kDa, Protein from rabbit)
- Ribosomal protein el32 (15 kDa, Protein from rabbit)
- Translocation intermediate ti-post-3 (Complex from Saccharomyces cerevisiae)
- Ribosomal protein ul18 (34 kDa, Protein from rabbit)
- Ribosomal protein el30 (11 kDa, Protein from rabbit)
- Ribosomal protein ul1 (24 kDa, Protein from rabbit)
- Ribosomal protein el14 (16 kDa, Protein from rabbit)
- Ribosomal protein el43 (10 kDa, Protein from rabbit)
- Ribosomal protein us2 (24 kDa, Protein from rabbit)
- Ribosomal protein es12 (13 kDa, Protein from rabbit)
- Ribosomal protein es27 (9 kDa, Protein from rabbit)
- Ribosomal protein es17 (14 kDa, Protein from rabbit)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein ul2 (27 kDa, Protein from rabbit)
- Ribosomal protein es25 (9 kDa, Protein from rabbit)
- Ribosomal protein el15 (24 kDa, Protein from rabbit)
- Ribosomal protein ul4 (41 kDa, Protein from rabbit)
- Ribosomal protein es31 (8 kDa, Protein from rabbit)
- Ribosomal protein es30 (6 kDa, Protein from rabbit)
- Ribosomal protein el28 (13 kDa, Protein from rabbit)
- Ribosomal protein us11 (14 kDa, Protein from rabbit)
- Ribosomal protein el34 (12 kDa, Protein from rabbit)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- E/e-site-trna (24 kDa, RNA from baker's yeast)
- Ribosomal protein es4 (28 kDa, Protein from rabbit)
- Ribosomal protein es19 (15 kDa, Protein from rabbit)
- Ribosomal protein ul13 (22 kDa, Protein from rabbit)
- Ribosomal protein ul22 (17 kDa, Protein from rabbit)
- Ribosomal protein el8 (26 kDa, Protein from rabbit)
- Mrna (3 kDa, RNA from Enterobacteria phage SP6)
- Ribosomal protein el24 (14 kDa, Protein from rabbit)
- Ribosomal protein el13 (23 kDa, Protein from rabbit)
- 28s ribosomal rna (1 MDa, RNA from rabbit)
- Ribosomal protein el27 (15 kDa, Protein from rabbit)
- Ribosomal protein us4 (21 kDa, Protein from rabbit)
- Ribosomal protein el31 (12 kDa, Protein from rabbit)
- Ribosomal protein us19 (14 kDa, Protein from rabbit)
- Ribosomal protein el38 (8 kDa, Protein from rabbit)