Bacterial transcription termination factor Rho + ADP
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 8q3n
Q-score: 0.476
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Filament of rho mutant g150d (Complex from Escherichia coli)
- Transcription termination factor rho (47 kDa, Protein from Escherichia coli)
Bacterial transcription termination factor Rho G150D mutant bound to ADP; C-terminal 8xHis-tag
Resolution: 3.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 8q3p
Q-score: 0.45
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Transcription termination factor rho (48 kDa, Protein from Escherichia)
- Filament of rho mutant g150d (Complex from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
Bacterial transcription termination factor Rho G152D mutant bound to ADP; C-terminal 8xHis-tag
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 8q3q
Q-score: 0.459
Wang B, Said N, Hilal T, Finazzo M, Wahl MC, Artsimovitch I
bioRxiv (2023) [ DOI: doi:10.1101/2023.08.18.553922 Pubmed: 37645988 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Filament of rho mutant g150d (Complex from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Transcription termination factor rho (48 kDa, Protein from Escherichia coli)
HUMAN IMPDH1 TREATED WITH ATP, IMP, AND NAD+
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7rer
Q-score: 0.675
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Inosinic acid (348 Da, Ligand)
- Isoform 5 of inosine-5'-monophosphate dehydrogenase 1 (55 kDa, Protein from Homo sapiens)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
HUMAN IMPDH1 TREATED WITH ATP, IMP, AND NAD+; OCTAMER-CENTERED
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 7res
Q-score: 0.575
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Inosinic acid (348 Da, Ligand)
- Isoform 5 of inosine-5'-monophosphate dehydrogenase 1 (55 kDa, Protein from Homo sapiens)
HUMAN IMPDH1 TREATED WITH GTP, IMP, AND NAD+; INTERFACE-CENTERED
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7rfe
Q-score: 0.64
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Inosine-5'-monophosphate dehydrogenase 1 (54 kDa, Protein from Homo sapiens)
- Inosinic acid (348 Da, Ligand)
HUMAN IMPDH1 TREATED WITH GTP, IMP, AND NAD+ OCTAMER-CENTERED
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7rfg
Q-score: 0.649
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Inosinic acid (348 Da, Ligand)
- Isoform 5 of inosine-5'-monophosphate dehydrogenase 1 (55 kDa, Protein from Homo sapiens)
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH ATP, OCTAMER-CENTERED
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7rfh
Q-score: 0.475
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Isoform 5 of inosine-5'-monophosphate dehydrogenase 1 (63 kDa, Protein from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH GTP, ATP, IMP, NAD+, INTERFACE-CENTERED
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7rfi
Q-score: 0.637
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Isoform 5 of inosine-5'-monophosphate dehydrogenase 1 (66 kDa, Protein from Homo sapiens)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Inosinic acid (348 Da, Ligand)
HUMAN RETINAL VARIANT IMPDH1(595) TREATED WITH GTP, ATP, IMP, NAD+, OCTAMER-CENTERED
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7rgd
Q-score: 0.593
Burrell AL, Nie C, Said M, Simonet JC, Fernandez-Justel D, Johnson MC, Quispe J, Buey RM, Peterson JR, Kollman JM
Nat Struct Mol Biol (2022) 29 pp. 47-58 [ DOI: doi:10.1038/s41594-021-00706-2 Pubmed: 35013599 ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Isoform 5 of inosine-5'-monophosphate dehydrogenase 1 (63 kDa, Protein from Homo sapiens)
- Assembly interface of impdh1 filament bound to atp, imp, nad+ (55 GDa, Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Inosinic acid (348 Da, Ligand)