Influenza A virus Hemagglutinin H5/Vietnam/1204/2004 in complex with D04 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8ume
Q-score: 0.462
Feldman J, Ramos ASF, Vu M, Maurer DP, Rosado VC, Lingwood D, Bajic G, Schmidt AG
Sci Immunol (2025) 10 pp. eado9572-eado9572 [ Pubmed: 39854479 DOI: doi:10.1126/sciimmunol.ado9572 ]
- Fab light chain (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Fab heavy chain (24 kDa, Protein from Homo sapiens)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Ha/fab (350 MDa, Complex from Homo sapiens)
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ut3
Q-score: 0.58
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- Uca6 lc fv (11 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Uca6 hc fv (13 kDa, Protein from Homo sapiens)
- An uca6 fab complex with one protomer of a h3 trimer (Complex from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ut4
Q-score: 0.433
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin ha2 chain (28 kDa, Protein from Influenza A virus)
- 09-1b12 fab (Complex from Homo sapiens)
- 09-1b12 lc fv (12 kDa, Protein from Homo sapiens)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus)
- An 09-1b12 fab complex with one protomer of a h1 trimer (Complex from Influenza A virus)
- 09-1b12 hc fv (13 kDa, Protein from Homo sapiens)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8ut5
Q-score: 0.439
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin ha2 chain (28 kDa, Protein from Influenza A virus)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus)
- Uca6_n55t lc fv (11 kDa, Protein from Homo sapiens)
- Uca6_n55t hc fv (13 kDa, Protein from Homo sapiens)
- An uca6 fab complex with one protomer of a h3 trimer (Complex from Homo sapiens)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ut6
Q-score: 0.549
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- H3d15 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- Polyclonal fab purified from mice sera (Complex from Mus musculus)
- H3d15 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Mice polyclonal fab complex with one protomer of a h3 trimer (Complex from Influenza A virus)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ut7
Q-score: 0.591
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- A/perth/16/2009 h3 (Complex from Influenza A virus)
- H3d28 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- H3d28 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- Polyclonal fab purified from mice sera (Complex from Mus musculus)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ut8
Q-score: 0.442
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin ha1 chain (34 kDa, Protein from Influenza A virus)
- H7d15 polyclonal fab purified from mice sera (Complex from Mus musculus)
- Mice polyclonal fab complex with one protomer of a h7 trimer (Complex from Influenza A virus)
- H7d15 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Hemagglutinin ha2 chain (26 kDa, Protein from Influenza A virus)
- H7d15 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ut9
Q-score: 0.461
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin ha1 chain (34 kDa, Protein from Influenza A virus)
- Mice polyclonal fab complex with one protomer of a h7 trimer (Complex from Influenza A virus)
- H7d28 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- H7d28 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Hemagglutinin ha2 chain (26 kDa, Protein from Influenza A virus)
- H7d28 polyclonal fab purified from mice sera (Complex from Mus musculus)
X-31 hemagglutinin in complex with FL-1061 Fab
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8g5a
Q-score: 0.477
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Fl-1086 fab heavy chain (26 kDa, Protein from Mus musculus)
- X-31 hemagglutinin in complex with fl-1061 fabs (Complex from Influenza A virus)
- Fl-1086 light chain (23 kDa, Protein from Mus musculus)
- Hemagglutinin (70 kDa, Protein from Influenza A virus)
Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8g5b
Q-score: 0.564
To Be Published
- Fl-1086 heavy chain (28 kDa, Protein from Mus musculus)
- S5v2-29 heavy chain (25 kDa, Protein from Homo sapiens)
- Fl-1086 light chain (26 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Fl-1061 light chain (25 kDa, Protein from Mus musculus)
- S5v2-29 light chain (22 kDa, Protein from Homo sapiens)
- Hemagglutinin (41 kDa, Protein from Influenza A virus)
- Influenza a h3n (Complex from Influenza A virus)
- Fl-1061 heavy chain (28 kDa, Protein from Mus musculus)