Human-D02 Nucleosome Core Particle with biotin-streptavidin label
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6r0c
Q-score: 0.373
Wilson MD, Renault L, Maskell DP, Ghoneim M, Pye VE, Nans A, Rueda DS, Cherepanov P, Costa A
Nat Commun (2019) 10 pp. 4189-4189 [ DOI: doi:10.1038/s41467-019-12007-w Pubmed: 31519882 ]
- Histones (Complex from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Manganese (ii) ion (54 Da, Ligand)
- Histone h2a type 1 (14 kDa, Protein from Homo sapiens)
- Dna (Complex from Homo sapiens)
- Dna (142-mer) (44 kDa, DNA from Homo sapiens)
- Dna (142-mer) (45 kDa, DNA from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Human-d02 nucleosome core particle with biotin-streptavidin label (286 kDa, Complex)
- Histone h3.3 (15 kDa, Protein from Homo sapiens)
Chromatin remodeller-nucleosome complex at 4.5 A resolution.
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6gen
Q-score: 0.195
Willhoft O, Ghoneim M, Lin CL, Chua EYD, Wilkinson M, Chaban Y, Ayala R, McCormack EA, Ocloo L, Rueda DS, Wigley DB
Science (2018) 362 [ Pubmed: 30309918 DOI: doi:10.1126/science.aat7716 ]
- Vacuolar protein sorting-associated protein 71 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Histone h4 (11 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin-like protein arp6 (50 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna (Complex from synthetic construct)
- Swr1-nucleosome complex (1 MDa, Complex)
- Dna (173-mer) (53 kDa, DNA from synthetic construct)
- Magnesium ion (24 Da, Ligand)
- Histone h3 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Remodeller (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Histone h2a.1 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Vacuolar protein sorting-associated protein 72 (11 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Helicase swr1 (174 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna (173-mer) (53 kDa, DNA from synthetic construct)
- Ruvb-like protein 2 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ruvb-like protein 1 (50 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Beryllium trifluoride ion (66 Da, Ligand)
- Histones (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Histone h2b.1 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))