Cryo-EM structure of the human 55S mitoribosome with Tigecycline
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8k2a
Q-score: 0.545
Li X, Wang M, Denk T, Buschauer R, Li Y, Beckmann R, Cheng J
Nat Commun (2024) 15 pp. 5481-5481 [ DOI: doi:10.1038/s41467-024-49797-7 Pubmed: 38942792 ]
- Large ribosomal subunit protein ml65 (50 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms25 (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul16m (28 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul23m (17 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us14m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml49 (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4m (34 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml46 (31 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml64 (25 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms26 (24 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms40 (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul29m (29 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms31 (45 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us12m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml63 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl27m (16 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs21m (10 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul2m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us2m (33 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms23 (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms29 (45 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul13m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml40 (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml43 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul14m (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us17m (14 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl21m (22 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs18m (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs6m (14 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms33 (12 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein bl35m (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms22 (41 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms37 (13 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml45 (35 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl32m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul3m (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml53 (12 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us9m (45 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us15m (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml55 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us3m (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml41 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms35 (36 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms39 (78 kDa, Protein from Homo sapiens)
- 12s rrna (306 kDa, RNA from Homo sapiens)
- Small ribosomal subunit protein us7m (28 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs16m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul10m (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml44 (37 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl36m (11 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl9m (30 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us10m (23 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms27 (47 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul15m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml48 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl28m (30 kDa, Protein from Homo sapiens)
- 55s mitoribosome with tigecycline (Complex from Homo sapiens)
- Large ribosomal subunit protein bl19m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml42 (16 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs1m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml37 (48 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us5m (48 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl20m (17 kDa, Protein from Homo sapiens)
- Tigecycline (587 Da, Ligand)
- Large ribosomal subunit protein ml54 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms38 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl17m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml38 (44 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml66 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml39 (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul24m (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml50 (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml62 (23 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein ms34 (25 kDa, Protein from Homo sapiens)
- Val trna (22 kDa, RNA from Homo sapiens)
Cryo-EM structure of the human 39S mitoribosome with Tigecycline
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8k2b
Q-score: 0.477
Li X, Wang M, Denk T, Buschauer R, Li Y, Beckmann R, Cheng J
Nat Commun (2024) 15 pp. 5481-5481 [ DOI: doi:10.1038/s41467-024-49797-7 Pubmed: 38942792 ]
- Large ribosomal subunit protein ml65 (50 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml55 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl21m (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml37 (48 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml41 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl20m (17 kDa, Protein from Homo sapiens)
- Tigecycline (587 Da, Ligand)
- Large ribosomal subunit protein ul16m (28 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul23m (17 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml54 (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml49 (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4m (34 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml42 (16 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein ml46 (31 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl35m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml64 (25 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl17m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul10m (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul29m (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml38 (44 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml44 (37 kDa, Protein from Homo sapiens)
- Acyl carrier protein, mitochondrial (17 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml66 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml39 (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl36m (11 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml63 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl27m (16 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl9m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul24m (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml45 (35 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml50 (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul2m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul15m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Homo sapiens)
- Mitochondrial assembly of ribosomal large subunit protein 1 (26 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml48 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl32m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul3m (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml53 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml62 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl28m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Homo sapiens)
- 4'-phosphopantetheine (358 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Large ribosomal subunit protein ul13m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml40 (24 kDa, Protein from Homo sapiens)
- Mitochondrial ribosome and complex i assembly factor altmief1 (8 kDa, Protein from Homo sapiens)
- 55s mitoribosome with tigecycline (Complex from Homo sapiens)
- Large ribosomal subunit protein bl19m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml43 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul14m (15 kDa, Protein from Homo sapiens)
- Val trna (22 kDa, RNA from Homo sapiens)
Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8xt0
Q-score: 0.434
Li X, Wang M, Denk T, Buschauer R, Li Y, Beckmann R, Cheng J
Nat Commun (2024) 15 pp. 5481-5481 [ DOI: doi:10.1038/s41467-024-49797-7 Pubmed: 38942792 ]
- Large ribosomal subunit protein ml65 (50 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms25 (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul16m (28 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul23m (17 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us14m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml49 (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4m (34 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml46 (31 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml64 (25 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms26 (24 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms40 (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul29m (29 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms31 (45 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us12m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml63 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl27m (16 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs21m (10 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul2m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us2m (33 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms23 (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms29 (45 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul13m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml40 (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml43 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul14m (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us17m (14 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl21m (22 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs18m (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs6m (14 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms33 (12 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein bl35m (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms22 (41 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms37 (13 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml45 (35 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl32m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul3m (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml53 (12 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us9m (45 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us15m (29 kDa, Protein from Homo sapiens)
- 55s ribosome with tigecycline (Complex from Homo sapiens)
- Large ribosomal subunit protein ml55 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us3m (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml41 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms35 (36 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms39 (78 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us7m (28 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs16m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul10m (29 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Large ribosomal subunit protein ml44 (37 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl36m (11 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl9m (30 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us10m (23 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms27 (47 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul15m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml48 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl28m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl19m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml42 (16 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs1m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml37 (48 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us5m (48 kDa, Protein from Homo sapiens)
- 12s rrna (306 kDa, RNA from Homo sapiens)
- Large ribosomal subunit protein ul11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl20m (17 kDa, Protein from Homo sapiens)
- Tigecycline (587 Da, Ligand)
- Large ribosomal subunit protein ml54 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms38 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl17m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml38 (44 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml66 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml39 (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul24m (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml50 (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml62 (23 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein ms34 (25 kDa, Protein from Homo sapiens)
- Val trna (22 kDa, RNA from Homo sapiens)
Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8xt1
Q-score: 0.472
Li X, Wang M, Denk T, Buschauer R, Li Y, Beckmann R, Cheng J
Nat Commun (2024) 15 pp. 5481-5481 [ DOI: doi:10.1038/s41467-024-49797-7 Pubmed: 38942792 ]
- Large ribosomal subunit protein ml65 (50 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml55 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl21m (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml37 (48 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml41 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl20m (17 kDa, Protein from Homo sapiens)
- Tigecycline (587 Da, Ligand)
- Large ribosomal subunit protein ul16m (28 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul23m (17 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml54 (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml49 (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4m (34 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml42 (16 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein ml46 (31 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl35m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml64 (25 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl17m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul10m (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul29m (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml38 (44 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml44 (37 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml66 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml39 (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl36m (11 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml63 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl27m (16 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl9m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul24m (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml45 (35 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml50 (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul2m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul15m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml48 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl32m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul3m (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml53 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml62 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl28m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Large ribosomal subunit protein ul13m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml40 (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl19m (33 kDa, Protein from Homo sapiens)
- 55s ribosome with tigecycline (Complex from Homo sapiens)
- Large ribosomal subunit protein ml43 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul14m (15 kDa, Protein from Homo sapiens)
- Val trna (22 kDa, RNA from Homo sapiens)
Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8xt2
Q-score: 0.415
Li X, Wang M, Denk T, Buschauer R, Li Y, Beckmann R, Cheng J
Nat Commun (2024) 15 pp. 5481-5481 [ DOI: doi:10.1038/s41467-024-49797-7 Pubmed: 38942792 ]
- Large ribosomal subunit protein ml65 (50 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms25 (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul16m (28 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul23m (17 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us14m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml49 (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4m (34 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml46 (31 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml64 (25 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms26 (24 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms40 (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul29m (29 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms31 (45 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us12m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml63 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl27m (16 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs21m (10 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul2m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us2m (33 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms23 (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms29 (45 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul13m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml40 (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml43 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul14m (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us17m (14 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl21m (22 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs18m (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs6m (14 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms33 (12 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein bl35m (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms22 (41 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms37 (13 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml45 (35 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl32m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul3m (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml53 (12 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us9m (45 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us15m (29 kDa, Protein from Homo sapiens)
- 55s ribosome with tigecycline (Complex from Homo sapiens)
- Large ribosomal subunit protein ml55 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us3m (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml41 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms35 (36 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms39 (78 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us7m (28 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs16m (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul10m (29 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Large ribosomal subunit protein ml44 (37 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl36m (11 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl9m (30 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us10m (23 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms27 (47 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul15m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml48 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl28m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl19m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml42 (16 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein bs1m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml37 (48 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us5m (48 kDa, Protein from Homo sapiens)
- 12s rrna (306 kDa, RNA from Homo sapiens)
- Large ribosomal subunit protein ul11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl20m (17 kDa, Protein from Homo sapiens)
- Tigecycline (587 Da, Ligand)
- Large ribosomal subunit protein ml54 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein ms38 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl17m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml38 (44 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml66 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml39 (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul24m (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml50 (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml62 (23 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Small ribosomal subunit protein ms34 (25 kDa, Protein from Homo sapiens)
- Val trna (22 kDa, RNA from Homo sapiens)
Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8xt3
Q-score: 0.467
Li X, Wang M, Denk T, Buschauer R, Li Y, Beckmann R, Cheng J
Nat Commun (2024) 15 pp. 5481-5481 [ DOI: doi:10.1038/s41467-024-49797-7 Pubmed: 38942792 ]
- Large ribosomal subunit protein ml65 (50 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml55 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl21m (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml37 (48 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml41 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul11m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl20m (17 kDa, Protein from Homo sapiens)
- Tigecycline (587 Da, Ligand)
- Large ribosomal subunit protein ul16m (28 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul23m (17 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml54 (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml49 (19 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4m (34 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml42 (16 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein ml46 (31 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl35m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml64 (25 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl17m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul10m (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul29m (29 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml38 (44 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml44 (37 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml66 (22 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml39 (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl36m (11 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml63 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl27m (16 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl9m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul24m (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml45 (35 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml50 (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul2m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul15m (33 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml48 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl32m (21 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul3m (38 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml53 (12 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml62 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl28m (30 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Large ribosomal subunit protein ul13m (20 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ml40 (24 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein bl19m (33 kDa, Protein from Homo sapiens)
- 55s ribosome with tigecycline (Complex from Homo sapiens)
- Large ribosomal subunit protein ml43 (23 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul14m (15 kDa, Protein from Homo sapiens)
- Val trna (22 kDa, RNA from Homo sapiens)
Large subunit of the Chlamydomonas reinhardtii mitoribosome
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7pkt
Q-score: 0.486
Waltz F, Salinas-Giege T, Englmeier R, Meichel H, Soufari H, Kuhn L, Pfeffer S, Forster F, Engel BD, Giege P, Drouard L, Hashem Y
Nat Commun (2021) 12 pp. 7176-7176 [ Pubmed: 34887394 DOI: doi:10.1038/s41467-021-27200-z ]
- Ul5m (23 kDa, Protein from Chlamydomonas reinhardtii)
- Bl28m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ul3m (44 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l18e/l15p domain-containing protein (35 kDa, Protein from Chlamydomonas reinhardtii)
- 50s ribosomal protein l20 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml59/64 (14 kDa, Protein from Chlamydomonas reinhardtii)
- L2a rrna (27 kDa, RNA from Chlamydomonas reinhardtii)
- 50s ribosomal protein l9, chloroplastic (30 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Chlamydomonas reinhardtii)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ml115 (72 kDa, Protein from Chlamydomonas reinhardtii)
- L6 rrna (43 kDa, RNA from Chlamydomonas reinhardtii)
- Kow domain-containing protein,ul24m (31 kDa, Protein from Chlamydomonas reinhardtii)
- Ml87 (23 kDa, Protein from Chlamydomonas reinhardtii)
- L3b rrna (59 kDa, RNA from Chlamydomonas reinhardtii)
- L4 rrna (38 kDa, RNA from Chlamydomonas reinhardtii)
- Unk2 (4 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l13 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17,bl17m (21 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_tl5_c domain-containing protein (38 kDa, Protein from Chlamydomonas reinhardtii)
- Ml43 (16 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Bl36m (3 kDa, Protein from Chlamydomonas reinhardtii)
- Plastid ribosomal protein l6 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Bl21m (40 kDa, Protein from Chlamydomonas reinhardtii)
- Ul22m (39 kDa, Protein from Chlamydomonas reinhardtii)
- Ml117 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l23 (25 kDa, Protein from Chlamydomonas reinhardtii)
- Ml40 (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ml114 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Large subunit of the mitochondrial ribosome of chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- L8 rrna (132 kDa, RNA from Chlamydomonas reinhardtii)
- Ml118 (64 kDa, Protein from Chlamydomonas reinhardtii)
- Unk1 (2 kDa, Protein from Chlamydomonas reinhardtii)
- Ppr* (14 kDa, Protein from Chlamydomonas reinhardtii)
- Bl27m (18 kDa, Protein from Chlamydomonas reinhardtii)
- L3a rrna (5s) (24 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l30 domain-containing protein (24 kDa, Protein from Chlamydomonas reinhardtii)
- Ml41 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Bl32m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml63/57/60 (14 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l33 (6 kDa, Protein from Chlamydomonas reinhardtii)
- Bl35m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ml80 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l2_c domain-containing protein (41 kDa, Protein from Chlamydomonas reinhardtii)
- L1 rrna (51 kDa, RNA from Chlamydomonas reinhardtii)
- Ul14m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml119 (36 kDa, Protein from Chlamydomonas reinhardtii)
- Ml116 (53 kDa, Protein from Chlamydomonas reinhardtii)
- Bl34m (29 kDa, Protein from Chlamydomonas reinhardtii)
- L7 rrna (186 kDa, RNA from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- L5 rrna (47 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l16 domain-containing protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Ul29m (14 kDa, Protein from Chlamydomonas reinhardtii)
- Ml113 (84 kDa, Protein from Chlamydomonas reinhardtii)
- Ul4m (45 kDa, Protein from Chlamydomonas reinhardtii)
Leishmania Major mitochondrial ribosome
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ane
Q-score: 0.321
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ Pubmed: 33168716 DOI: doi:10.1073/pnas.2011301117 ]
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Leishmania major)
- Bl21m (20 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ms70 (21 kDa, Protein from Leishmania major)
- Ms69 (16 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Ml38 (57 kDa, Protein from Leishmania major)
- Excreted/secreted protein 15 (92 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Bs21m (22 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- Ms73 (11 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ms62 (27 kDa, Protein from Leishmania major)
- Us11m (40 kDa, Protein from Leishmania major)
- Ms29 (54 kDa, Protein from Leishmania major)
- Ms58 (36 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Ms49 (133 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ms57 (45 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (18 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Us15m (50 kDa, Protein from Leishmania major)
- Akap7_nls domain-containing protein (31 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Us10m (92 kDa, Protein from Leishmania major)
- Ms22 (73 kDa, Protein from Leishmania major)
- Large ribosomal rna (6 MDa, RNA from Leishmania major)
- Ms66 (44 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Ms55 (65 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ms33 (20 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Ms61 (33 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ms43 (51 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Putative superoxide dismutase (30 kDa, Protein from Leishmania major)
- Ms72 (19 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- Ms60 (35 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Ms63 (33 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (53 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Bs6m (18 kDa, Protein from Leishmania major)
- Ms37 (24 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- Ms23 (36 kDa, Protein from Leishmania major)
- Rhodanese domain-containing protein (30 kDa, Protein from Leishmania major)
- Ms48 (199 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Ms34 (29 kDa, Protein from Leishmania major)
- Ms51 (94 kDa, Protein from Leishmania major)
- Us3m (10 kDa, Protein from Leishmania major)
- Ms71 (19 kDa, Protein from Leishmania major)
- Ml59/64 (28 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Us14m (19 kDa, Protein from Leishmania major)
- Protein fyv4, mitochondrial (22 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Us9m (39 kDa, Protein from Leishmania major)
- Ml52 (29 kDa, Protein from Leishmania major)
- Ul4m (49 kDa, Protein from Leishmania major)
- Ms65 (30 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Bs18m (37 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Ms56 (43 kDa, Protein from Leishmania major)
- 30s ribosomal protein s17-like protein (36 kDa, Protein from Leishmania major)
- Us8m (35 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Leishmania major mitochondrial riobosome (Complex from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ubiquitin-like domain-containing protein (27 kDa, Protein from Leishmania major)
- Ms35 (99 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- Us19m (19 kDa, Protein from Leishmania major)
- Ms59 (35 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ms50 (139 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ms53 (72 kDa, Protein from Leishmania major)
- Bl20m (22 kDa, Protein from Leishmania major)
- Magnesium ion (24 Da, Ligand)
- Bs16m (22 kDa, Protein from Leishmania major)
- Ms52 (75 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Ms47 (131 kDa, Protein from Leishmania major)
- Ms26 (49 kDa, Protein from Leishmania major)
The Large subunit of the Kinetoplastid mitochondrial ribosome
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7aih
Q-score: 0.479
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ DOI: doi:10.1073/pnas.2011301117 Pubmed: 33168716 ]
- Ml40 (33 kDa, Protein from Leishmania major)
- Ml75 (39 kDa, Protein from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ml54/69 (28 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ml94 (17 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Ml76 (38 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Bl20 (22 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Ml52,ml52 (29 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Ribosomal rna (2 MDa, RNA from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml38 (58 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (19 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Bl21m (21 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Ul4m (50 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
Intermediate assembly of the Large subunit from Leishmania major mitochondrial ribosome
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7am2
Q-score: 0.469
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ Pubmed: 33168716 DOI: doi:10.1073/pnas.2011301117 ]
- Bl20m (22 kDa, Protein from Leishmania tarentolae)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania tarentolae)
- Ml85 (27 kDa, Protein from Leishmania tarentolae)
- Ul29m (54 kDa, Protein from Leishmania tarentolae)
- Ml74 (39 kDa, Protein from Leishmania tarentolae)
- Ml78 (33 kDa, Protein from Leishmania tarentolae)
- Ml53 (35 kDa, Protein from Leishmania tarentolae)
- R1 (896 Da, RNA from Leishmania tarentolae)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania tarentolae)
- Ml100 (146 kDa, Protein from Leishmania tarentolae)
- U2 (2 kDa, Protein from Leishmania tarentolae)
- U1 (3 kDa, Protein from Leishmania tarentolae)
- Ul23m (28 kDa, Protein from Leishmania tarentolae)
- Dnaj-like protein (45 kDa, Protein from Leishmania tarentolae)
- Ml67 (97 kDa, Protein from Leishmania tarentolae)
- Ml81 (37 kDa, Protein from Leishmania tarentolae)
- Spou_methylase domain-containing protein (63 kDa, Protein from Leishmania tarentolae)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania tarentolae)
- Ml72 (56 kDa, Protein from Leishmania tarentolae)
- Ml52,ml52 (29 kDa, Protein from Leishmania tarentolae)
- Ml75 (39 kDa, Protein from Leishmania tarentolae)
- Ml95 (18 kDa, Protein from Leishmania tarentolae)
- Ml49 (26 kDa, Protein from Leishmania tarentolae)
- G domain-containing protein (51 kDa, Protein from Leishmania tarentolae)
- U3 (5 kDa, Protein from Leishmania tarentolae)
- Dead/deah box helicase-like protein (87 kDa, Protein from Leishmania tarentolae)
- R2 (10 kDa, RNA from Leishmania tarentolae)
- Acyl carrier protein (16 kDa, Protein from Leishmania tarentolae)
- U6 (13 kDa, Protein from Leishmania tarentolae)
- Ribosomal protein l3-like protein (54 kDa, Protein from Leishmania tarentolae)
- Ml98 (13 kDa, Protein from Leishmania tarentolae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Leishmania mitochondrial ribosome (Complex from Leishmania tarentolae)
- Ml87 (22 kDa, Protein from Leishmania tarentolae)
- Bl35m (18 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania tarentolae)
- Bl28m (27 kDa, Protein from Leishmania tarentolae)
- Gtpase der (56 kDa, Protein from Leishmania tarentolae)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- U5 (6 kDa, Protein from Leishmania tarentolae)
- Bl32m (9 kDa, Protein from Leishmania tarentolae)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania tarentolae)
- Bl19m (16 kDa, Protein from Leishmania tarentolae)
- Ml94 (17 kDa, Protein from Leishmania tarentolae)
- L0r8f8 (14 kDa, Protein from Leishmania tarentolae)
- Ml78 (3 kDa, Protein from Leishmania tarentolae)
- Ml84 (24 kDa, Protein from Leishmania tarentolae)
- Ua (14 kDa, Protein from Leishmania tarentolae)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania tarentolae)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania tarentolae)
- Ml80 (27 kDa, Protein from Leishmania tarentolae)
- R5 (1 kDa, RNA from Leishmania tarentolae)
- Ml76 (38 kDa, Protein from Leishmania tarentolae)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania tarentolae)
- Ul22m (32 kDa, Protein from Leishmania tarentolae)
- U4 (9 kDa, Protein from Leishmania tarentolae)
- Ml63 (18 kDa, Protein from Leishmania tarentolae)
- Ml68 (65 kDa, Protein from Leishmania tarentolae)
- Ml89 (21 kDa, Protein from Leishmania tarentolae)
- Bl21m (21 kDa, Protein from Leishmania tarentolae)
- Ml59/64 (28 kDa, Protein from Leishmania tarentolae)
- Ribosomal rna (6 MDa, RNA from Leishmania tarentolae)
- Ml99 (13 kDa, Protein from Leishmania tarentolae)
- Ml93 (18 kDa, Protein from Leishmania tarentolae)
- Ml41 (22 kDa, Protein from Leishmania tarentolae)
- Ul4m (50 kDa, Protein from Leishmania tarentolae)
- G domain-containing protein (86 kDa, Protein from Leishmania tarentolae)
- Ul24m (53 kDa, Protein from Leishmania tarentolae)
- U8 (4 kDa, Protein from Leishmania tarentolae)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania tarentolae)
- Ul30m (45 kDa, Protein from Leishmania tarentolae)
- Rna uridylyltransferase (23 kDa, Protein from Leishmania tarentolae)
- Ml86 (21 kDa, Protein from Leishmania tarentolae)
- Ml88 (22 kDa, Protein from Leishmania tarentolae)
- Pseudouridylate synthase-like protein (47 kDa, Protein from Leishmania tarentolae)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania tarentolae)
- Trud domain-containing protein (68 kDa, Protein from Leishmania tarentolae)
- Ml71 (49 kDa, Protein from Leishmania tarentolae)
- Ml42 (22 kDa, Protein from Leishmania tarentolae)
- Ml70 (50 kDa, Protein from Leishmania tarentolae)