S. cerevisiae pol alpha - replisome complex
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 8b9c
Q-score: 0.217
Jones ML, Aria V, Baris Y, Yeeles JTP
Mol Cell (2023) 83 pp. 2911- [ DOI: doi:10.1016/j.molcel.2023.06.035 Pubmed: 37506699 ]
- Topoisomerase 1-associated factor 1 (141 kDa, Protein from Saccharomyces cerevisiae)
- Cell division control protein 45 (75 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication complex gins protein psf2 (25 kDa, Protein from Saccharomyces cerevisiae)
- S. cerevisiae replisome - pol alpha primase complex (Complex from Saccharomyces cerevisiae)
- Dna polymerase alpha subunit b (78 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication licensing factor mcm6 (113 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication licensing factor mcm7 (95 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Mediator of replication checkpoint protein 1 (126 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication licensing factor mcm4 (105 kDa, Protein from Saccharomyces cerevisiae)
- Minichromosome maintenance protein 5 (86 kDa, Protein from Saccharomyces cerevisiae)
- Dna primase small subunit (51 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication licensing factor mcm3 (111 kDa, Protein from Saccharomyces cerevisiae)
- Dna primase large subunit (62 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication licensing factor mcm2 (98 kDa, Protein from Saccharomyces cerevisiae)
- Dna replication complex gins protein psf3 (24 kDa, Protein from Saccharomyces cerevisiae)
- Leading strand (26 kDa, DNA from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Dna replication complex gins protein sld5 (33 kDa, Protein from Saccharomyces cerevisiae)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Chromosome segregation in meiosis protein 3 (36 kDa, Protein from Saccharomyces cerevisiae)
- Lagging strand (32 kDa, DNA from Saccharomyces cerevisiae)
- Dna replication complex gins protein psf1 (24 kDa, Protein from Saccharomyces cerevisiae)
- Dna polymerase alpha catalytic subunit a (167 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of the CMG Fork Protection Complex at a replication fork - Conformation 1
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6skl
Q-score: 0.352
Baretic D, Jenkyn-Bedford M, Aria V, Cannone G, Skehel M, Yeeles JTP
Mol Cell (2020) 78 pp. 926-940.e13 [ DOI: doi:10.1016/j.molcel.2020.04.012 Pubmed: 32369734 ]
- Dna replication licensing factor mcm6 (113 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication complex gins protein sld5 (33 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna (Complex from synthetic construct)
- Dna fork, leading-strand template (26 kDa, DNA from synthetic construct)
- Magnesium ion (24 Da, Ligand)
- Chromosome segregation in meiosis protein 3 (36 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Cmg-csm3-tof1-mrc1-ctf4 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication complex gins protein psf3 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Conformation 1 of cmg-csm3-tof1-mrc1-ctf4 with a fork dna (1 MDa, Complex)
- Dna replication complex gins protein psf1 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Topoisomerase 1-associated factor 1 (141 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna polymerase alpha-binding protein (104 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Cell division control protein 45 (74 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna fork, lagging-strand template (18 kDa, DNA from synthetic construct)
- Dna replication licensing factor mcm3 (107 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Dna replication licensing factor mcm2 (98 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Minichromosome maintenance protein 5 (86 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication complex gins protein psf2 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm7 (95 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Dna replication licensing factor mcm4 (105 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6sko
Q-score: 0.411
Baretic D, Jenkyn-Bedford M, Aria V, Cannone G, Skehel M, Yeeles JTP
Mol Cell (2020) 78 pp. 926-940.e13 [ DOI: doi:10.1016/j.molcel.2020.04.012 Pubmed: 32369734 ]
- Dna replication licensing factor mcm7 (95 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Dna replication licensing factor mcm2 (98 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm6 (113 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Dna replication licensing factor mcm3 (107 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ssdna, leading-strand template (26 kDa, DNA from synthetic construct)
- Conformation 2 of cmg-csm3-tof1-mrc1-ctf4 with a fork dna (1 MDa, Complex)
- Dna (Complex from synthetic construct)
- Dna replication licensing factor mcm4 (105 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Cmg-csm3-tof1-mrc1-ctf4 (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Minichromosome maintenance protein 5 (86 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))