Cryo-EM structure of SARS-CoV-2 Omicron BA.2 RBD in complex with mouse ACE2 (local refinement)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7yvu
Q-score: 0.484
Zhao Z, Xie Y, Bai B, Luo C, Zhou J, Li W, Meng Y, Li L, Li D, Li X, Li X, Wang X, Sun J, Xu Z, Sun Y, Zhang W, Fan Z, Zhao X, Wu L, Ma J, Li OY, Shang G, Chai Y, Liu K, Wang P, Gao GF, Qi J
Nat Commun (2023) 14 pp. 4405-4405 [ Pubmed: 37479708 DOI: doi:10.1038/s41467-023-39942-z ]
- Processed angiotensin-converting enzyme 2 (68 kDa, Protein from Mus musculus)
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Omicron ba.2 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Mouse angiotensin-converting enzyme 2 (Complex from Mus musculus)
- Cryo-em structure of sars-cov-2 omicron ba.2 rbd in complex with mouse ace2 (local refinement) (Complex)
SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with one mouse ACE2 Bound
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7xoa
Q-score: 0.253
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ Pubmed: 35641567 DOI: doi:10.1038/s41422-022-00672-4 ]
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse angiotensin-converting enzyme 2 (Complex from Mus musculus)
- Sars-cov-2 omicron ba.2 variant spike trimer with one mouse ace2 bound (Complex from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with two mouse ACE2 Bound
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7xob
Q-score: 0.23
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ Pubmed: 35641567 DOI: doi:10.1038/s41422-022-00672-4 ]
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse angiotensin-converting enzyme 2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron ba.2 variant spike trimer with two mouse ace2 bound (Complex from Mus musculus)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron BA.2 Variant RBD complexed with mouse ACE2
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7xoc
Q-score: 0.458
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ Pubmed: 35641567 DOI: doi:10.1038/s41422-022-00672-4 ]
- Zinc ion (65 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 omicron ba.2 variant rbd (Complex)
- Mouse angiotensin-converting enzyme 2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron ba.2 variant rbd complexed with mouse ace2 (Complex from Mus musculus)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)