Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffe
Q-score: 0.425
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ Pubmed: 34646021 DOI: doi:10.1038/s41586-021-03909-1 ]
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7fff
Q-score: 0.48
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ Pubmed: 34646021 DOI: doi:10.1038/s41586-021-03909-1 ]
- Calcium ion (40 Da, Ligand)
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Venezuelan equine encephalitis virus (strain TC-83))
- Low-density lipoprotein receptor class a domain-containing protein 3 (7 kDa, Protein from Homo sapiens)
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Homo sapiens)
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Ldlrad3 (Complex)
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 2-fold axes
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7ffl
Q-score: 0.466
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ Pubmed: 34646021 DOI: doi:10.1038/s41586-021-03909-1 ]
- Calcium ion (40 Da, Ligand)
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Venezuelan equine encephalitis virus (strain TC-83))
- Low-density lipoprotein receptor class a domain-containing protein 3 (7 kDa, Protein from Homo sapiens)
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Homo sapiens)
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Ldlrad3-d1 (Complex)
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 5-fold axes
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7ffn
Q-score: 0.506
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ Pubmed: 34646021 DOI: doi:10.1038/s41586-021-03909-1 ]
- Calcium ion (40 Da, Ligand)
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Homo sapiens)
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Low-density lipoprotein receptor class a domain-containing protein 3 (8 kDa, Protein from Homo sapiens)
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Ldlrad3 (Complex)
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP at the 5-fold axes
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffo
Q-score: 0.45
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ Pubmed: 34646021 DOI: doi:10.1038/s41586-021-03909-1 ]
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP at the 2-fold axes
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffq
Q-score: 0.382
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ Pubmed: 34646021 DOI: doi:10.1038/s41586-021-03909-1 ]
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
The symmetric-reconstructed cryo-EM structure of Zika virus-FabZK2B10 complex
Resolution: 11.0 Å
EM Method: Single-particle
Fitted PDBs: 6jfi
Q-score: 0.102
Wang L, Wang R, Wang L, Ben H, Yu L, Gao F, Shi X, Yin C, Zhang F, Xiang Y, Zhang L
Cell Rep (2019) 26 pp. 3360-3368.e5 [ DOI: doi:10.1016/j.celrep.2019.02.062 Pubmed: 30893607 ]
- Fabzk2b10 light chain (22 kDa, Protein from Homo sapiens)
- Strutural protein m (8 kDa, Protein from Zika virus)
- Zikv complexed with fabzk2b10 (Complex from Zika virus)
- Zikv structural protein e (54 kDa, Protein from Zika virus)
- Fabzk2b10 heavy chain (25 kDa, Protein from Homo sapiens)