Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7a01
Q-score: 0.37
Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT
Cell Rep (2020) 33 pp. 108476-108476 [ Pubmed: 33296660 DOI: doi:10.1016/j.celrep.2020.108476 ]
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (22 kDa, Protein from Oryctolagus cuniculus)
- Internal ribosome entry site (48 kDa, RNA from Halastavi arva RNA virus)
- Ribosomal protein l22 (11 kDa, Protein from Oryctolagus cuniculus)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4,40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l30 (10 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (15 kDa, Protein from Oryctolagus cuniculus)
- El34 (12 kDa, Protein from Oryctolagus cuniculus)
- Halastavi arva rna virus (Complex from Halastavi arva RNA virus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- Complex between 80s ribosome and halv igr ires (Complex from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el40 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us19 (15 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l6e_n domain-containing protein (4 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Complex between 80s ribosome and halv igr ires (Complex)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (580 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (21 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (23 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- S5 drbm domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 6zvk
Q-score: 0.421
Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT
Cell Rep (2020) 33 pp. 108476-108476 [ Pubmed: 33296660 DOI: doi:10.1016/j.celrep.2020.108476 ]
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l22 (11 kDa, Protein from Oryctolagus cuniculus)
- Internal ribosome entry site (48 kDa, RNA from Halastavi arva RNA virus)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- Complex between 870s ribosome and halv igr ires (Complex)
- Ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l30 (10 kDa, Protein from Oryctolagus cuniculus)
- El34 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul2 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el40 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us19 (15 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- Ribosomal_l6e_n domain-containing protein (4 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 18s ribosomal rna (602 kDa, RNA from Oryctolagus cuniculus)
- Halv igr ires (Complex from Halastavi arva RNA virus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosome (Complex from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul6 (21 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul23 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (23 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el28 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- S5 drbm domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 7a5f
Q-score: 0.396
Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V
Science (2020) 370 pp. 1105-1110 [ Pubmed: 33243891 DOI: doi:10.1126/science.abc7782 ]
- 50s ribosomal protein l1 (24 kDa, Protein from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039))
- Mt-trna (23 kDa, RNA from Homo sapiens)
- 28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s17, mitochondrial (14 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s22, mitochondrial (41 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from Homo sapiens)
- Mt-trna val (22 kDa, RNA from Homo sapiens)
- 28s ribosomal protein s29, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s24, mitochondrial (19 kDa, Protein from Homo sapiens)
- 12s rrna (306 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s34, mitochondrial (25 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s11, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s26, mitochondrial (24 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l36, mitochondrial (11 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s12, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l43, mitochondrial (23 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from Homo sapiens)
- 50s ribosomal protein l1 (Complex from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039))
- 28s ribosomal protein s33, mitochondrial (12 kDa, Protein from Homo sapiens)
- Oxa1l (2 kDa, Protein from Homo sapiens)
- Sulfate ion (96 Da, Ligand)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l48, mitochondrial (23 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- 39s ribosomal protein l18, mitochondrial (20 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s35, mitochondrial (36 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Homo sapiens)
- Mrna (3 kDa, RNA from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from Homo sapiens)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Homo sapiens)
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from Homo sapiens)
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s5, mitochondrial (48 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s25, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- 28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s6, mitochondrial (14 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 28s ribosomal protein s28, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s23, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Homo sapiens)
- Human mitoribosome (Complex from Homo sapiens)
- Nascent chain (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Homo sapiens)
- Aurora kinase a-interacting protein (22 kDa, Protein from Homo sapiens)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- 39s ribosomal protein s30, mitochondrial,39s ribosomal protein s30, mitochondrial,39s ribosomal protein s30, mitochondrial,ml65 (52 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s31, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s27, mitochondrial (47 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s18c, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from Homo sapiens)
- Malonate ion (102 Da, Ligand)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from Homo sapiens)
- Sodium ion (22 Da, Ligand)
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from Homo sapiens)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (23 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s2, mitochondrial (33 kDa, Protein from Homo sapiens)
- Chloride ion (35 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Human mitoribosome (Complex)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from Homo sapiens)
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Resolution: 4.33 Å
EM Method: Single-particle
Fitted PDBs: 7a5g
Q-score: 0.402
Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V
Science (2020) 370 pp. 1105-1110 [ DOI: doi:10.1126/science.abc7782 Pubmed: 33243891 ]
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Homo sapiens)
- E trna (24 kDa, RNA from Homo sapiens)
- Aurora kinase a-interacting protein (22 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l43, mitochondrial (23 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s5, mitochondrial (48 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s23, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from Homo sapiens)
- Rna (5'-r(p*cp*a)-3') (589 Da, RNA from Homo sapiens)
- Nascent chain (2 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s18c, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s17, mitochondrial (14 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from Homo sapiens)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s2, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from Homo sapiens)
- Chloride ion (35 Da, Ligand)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Homo sapiens)
- Spermidine (145 Da, Ligand)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 28s ribosomal protein s6, mitochondrial (14 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from Homo sapiens)
- Sulfate ion (96 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Homo sapiens)
- Mrna (3 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from Homo sapiens)
- 39s ribosomal protein s30, mitochondrial,39s ribosomal protein s30, mitochondrial,ml65 (52 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l48, mitochondrial (23 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Homo sapiens)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Oxa1l tail (2 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s11, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s33, mitochondrial (12 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s12, mitochondrial (15 kDa, Protein from Homo sapiens)
- Malonate ion (102 Da, Ligand)
- 28s ribosomal protein s28, mitochondrial (20 kDa, Protein from Homo sapiens)
- Sodium ion (22 Da, Ligand)
- 28s ribosomal protein s27, mitochondrial (47 kDa, Protein from Homo sapiens)
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s24, mitochondrial (19 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s31, mitochondrial (45 kDa, Protein from Homo sapiens)
- Human mitoribosome (Complex)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s26, mitochondrial (24 kDa, Protein from Homo sapiens)
- 50s ribosomal protein l1 homology model (Complex from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039))
- 28s ribosomal protein s34, mitochondrial (25 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (23 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Homo sapiens)
- P trna (23 kDa, RNA from Homo sapiens)
- 28s ribosomal protein s29, mitochondrial (45 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Homo sapiens)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Homo sapiens)
- Elongation factor tu, mitochondrial (49 kDa, Protein from Homo sapiens)
- Mt-trnaval (22 kDa, RNA from Homo sapiens)
- 50s ribosomal protein l1 (24 kDa, Protein from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039))
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s25, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s22, mitochondrial (41 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l18, mitochondrial (20 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- 39s ribosomal protein l36, mitochondrial (11 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Homo sapiens)
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s35, mitochondrial (36 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Homo sapiens)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from Homo sapiens)
- Human mitoribosome (Complex from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from Homo sapiens)
- 12s rrna (306 kDa, RNA from Homo sapiens)
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7a5h
Q-score: 0.553
Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V
Science (2020) 370 pp. 1105-1110 [ DOI: doi:10.1126/science.abc7782 Pubmed: 33243891 ]
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from human)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from human)
- Unknown protein/protein extension (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from human)
- Mief1 upstream open reading frame protein (8 kDa, Protein from human)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from human)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from human)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from human)
- Cdna flj76418, highly similar to homo sapiens mitochondrial ribosomal protein l52 (mrpl52), transcript variant 1, mrna (13 kDa, Protein from human)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from human)
- Zinc ion (65 Da, Ligand)
- Mitochondrial transcription rescue factor 1 (27 kDa, Protein from human)
- 39s ribosomal protein l48, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from human)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from human)
- 39s ribosomal protein s30, mitochondrial (50 kDa, Protein from human)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from human)
- Mitochondrial assembly of ribosomal large subunit protein 1 (26 kDa, Protein from human)
- Mt-trna (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l43, mitochondrial (17 kDa, Protein from human)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from human)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from human)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from human)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from human)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from human)
- Mt-trnaval (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from human)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from human)
- 16s rrna (500 kDa, RNA from human)
- Probable peptide chain release factor c12orf65, mitochondrial (18 kDa, Protein from human)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from human)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from human)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from human)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from human)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from human)
- Nascent chain (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from human)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from human)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from human)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from human)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from human)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from human)
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from human)
- Acyl carrier protein, mitochondrial (17 kDa, Protein from human)
- Human mitoribosome (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 4'-phosphopantetheine (358 Da, Ligand)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from human)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from human)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from human)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from human)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from human)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from human)
Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7a5i
Q-score: 0.494
Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V
Science (2020) 370 pp. 1105-1110 [ Pubmed: 33243891 DOI: doi:10.1126/science.abc7782 ]
- Mt-trna (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein s30, mitochondrial (50 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s17, mitochondrial (14 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l43, mitochondrial (17 kDa, Protein from Homo sapiens)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s22, mitochondrial (41 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s29, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s24, mitochondrial (19 kDa, Protein from Homo sapiens)
- 12s rrna (306 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s34, mitochondrial (25 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s11, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s26, mitochondrial (24 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l36, mitochondrial (11 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s12, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from Homo sapiens)
- Nascent chain (2 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s33, mitochondrial (12 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s35, mitochondrial (36 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Homo sapiens)
- Mt-trnaval (23 kDa, RNA from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from Homo sapiens)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Homo sapiens)
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from Homo sapiens)
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Homo sapiens)
- Mrna (2 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s5, mitochondrial (48 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s25, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Homo sapiens)
- 16s rrna (500 kDa, RNA from Homo sapiens)
- 28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s6, mitochondrial (14 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 28s ribosomal protein s28, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s23, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Homo sapiens)
- Human mitoribosome (Complex from Homo sapiens)
- 39s ribosomal protein l48, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Homo sapiens)
- Aurora kinase a-interacting protein (22 kDa, Protein from Homo sapiens)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s31, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s27, mitochondrial (47 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s18c, mitochondrial (15 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from Homo sapiens)
- Cdna flj76418, highly similar to homo sapiens mitochondrial ribosomal protein l52 (mrpl52), transcript variant 1, mrna (13 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from Homo sapiens)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s2, mitochondrial (33 kDa, Protein from Homo sapiens)
- Chloride ion (35 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Unknown protein/protein extension (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from Homo sapiens)
Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7a5j
Q-score: 0.497
Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V
Science (2020) 370 pp. 1105-1110 [ DOI: doi:10.1126/science.abc7782 Pubmed: 33243891 ]
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from human)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from human)
- Unknown protein/protein extension (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from human)
- Mief1 upstream open reading frame protein (8 kDa, Protein from human)
- Unknown protein/protein extension (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from human)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from human)
- 50s ribosomal protein l1 (24 kDa, Protein from Thermus thermophilus HB27)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from human)
- Cdna flj76418, highly similar to homo sapiens mitochondrial ribosomal protein l52 (mrpl52), transcript variant 1, mrna (13 kDa, Protein from human)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from human)
- Zinc ion (65 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- 39s ribosomal protein l48, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from human)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from human)
- Acyl carrier protein, mitochondrial (17 kDa, Protein from human)
- 39s ribosomal protein s30, mitochondrial (50 kDa, Protein from human)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from human)
- Mitochondrial assembly of ribosomal large subunit protein 1 (26 kDa, Protein from human)
- Mt-trna (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l43, mitochondrial (17 kDa, Protein from human)
- Unknown protein/protein extension (1 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from human)
- Ribosome (Complex from Homo sapiens)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from human)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from human)
- Mt-trnaval (22 kDa, RNA from human)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from human)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from human)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from human)
- 16s rrna (500 kDa, RNA from human)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from human)
- Nascent chain (2 kDa, Protein from Homo sapiens)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from human)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from human)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from human)
- Human mitoribosome (Complex)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from human)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from human)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from human)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from human)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from human)
- 39s ribosomal protein l36, mitochondrial (11 kDa, Protein from human)
- Chloride ion (35 Da, Ligand)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from human)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from human)
- 50s ribosomal protein l1 (Complex from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039))
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from human)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from human)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from human)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from human)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from human)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from human)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from human)
Structure of the human mitoribosome in the post translocation state bound to mtEF-G1
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7a5k
Q-score: 0.408
Desai N, Yang H, Chandrasekaran V, Kazi R, Minczuk M, Ramakrishnan V
Science (2020) 370 pp. 1105-1110 [ DOI: doi:10.1126/science.abc7782 Pubmed: 33243891 ]
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from human)
- 28s ribosomal protein s6, mitochondrial (14 kDa, Protein from human)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from human)
- Elongation factor g, mitochondrial (83 kDa, Protein from human)
- 28s ribosomal protein s7, mitochondrial (28 kDa, Protein from human)
- 28s ribosomal protein s25, mitochondrial (20 kDa, Protein from human)
- 28s ribosomal protein s5, mitochondrial (48 kDa, Protein from human)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from human)
- 28s ribosomal protein s35, mitochondrial (36 kDa, Protein from human)
- 39s ribosomal protein l1, mitochondrial (32 kDa, Protein from human)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from human)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from human)
- 28s ribosomal protein s27, mitochondrial (47 kDa, Protein from human)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from human)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from human)
- 28s ribosomal protein s10, mitochondrial (23 kDa, Protein from human)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from human)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from human)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from human)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from human)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from human)
- 28s ribosomal protein s28, mitochondrial (20 kDa, Protein from human)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from human)
- 28s ribosomal protein s29, mitochondrial (45 kDa, Protein from human)
- Aurora kinase a-interacting protein (22 kDa, Protein from human)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from human)
- Spermidine (145 Da, Ligand)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from human)
- 28s ribosomal protein s2, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from human)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from human)
- 28s ribosomal protein s11, mitochondrial (20 kDa, Protein from human)
- Zinc ion (65 Da, Ligand)
- 28s ribosomal protein s31, mitochondrial (45 kDa, Protein from human)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 28s ribosomal protein s22, mitochondrial (41 kDa, Protein from human)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from human)
- Unknown protein (2 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from human)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from human)
- Nascent chain (2 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from human)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from human)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from human)
- 28s ribosomal protein s24, mitochondrial (19 kDa, Protein from human)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from human)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from human)
- 28s ribosomal protein s14, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from human)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- 28s ribosomal protein s34, mitochondrial (25 kDa, Protein from human)
- Cdna flj76418, highly similar to homo sapiens mitochondrial ribosomal protein l52 (mrpl52), transcript variant 1, mrna (13 kDa, Protein from human)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from human)
- 12s rrna (306 kDa, RNA from Homo sapiens)
- Mt-trna (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l43, mitochondrial (17 kDa, Protein from human)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from human)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from human)
- 28s ribosomal protein s33, mitochondrial (12 kDa, Protein from human)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from human)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from human)
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from human)
- 28s ribosomal protein s17, mitochondrial (14 kDa, Protein from human)
- Mt-trnaval (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from human)
- 28s ribosomal protein s15, mitochondrial (29 kDa, Protein from human)
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from human)
- 28s ribosomal protein s26, mitochondrial (24 kDa, Protein from human)
- 28s ribosomal protein s23, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l48, mitochondrial (21 kDa, Protein from human)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from human)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from human)
- 39s ribosomal protein s30, mitochondrial (50 kDa, Protein from human)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from human)
- 28s ribosomal protein s12, mitochondrial (15 kDa, Protein from human)
- 28s ribosomal protein s18c, mitochondrial (15 kDa, Protein from human)
- 16s rrna (500 kDa, RNA from human)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from human)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from human)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from human)
- 39s ribosomal protein l36, mitochondrial (11 kDa, Protein from human)
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from human)
- Human mitoribosome (Complex from Homo sapiens)
- Rna (589 Da, RNA from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from human)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from human)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from human)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from human)
- Mitochondrial inner membrane protein oxa1l (48 kDa, Protein from human)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7as9
Q-score: 0.3
Crowe-McAuliffe C, Takada H, Murina V, Polte C, Kasvandik S, Tenson T, Ignatova Z, Atkinson GC, Wilson DN, Hauryliuk V
Mol Cell (2021) 81 pp. 115- [ Pubmed: 33259810 DOI: doi:10.1016/j.molcel.2020.11.002 ]
- 50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis (strain 168))
- Rqch (Complex from Bacillus subtilis (strain 168))
- 50s ribosomal protein l35 (7 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l11 (14 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal subunit in complex with rqch, p-trna, and yabo/rqcp (1 MDa, Complex)
- 5s rrna (38 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l33 1 (5 kDa, Protein from Bacillus subtilis (strain 168))
- Trna-ala-1-1 (24 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis (strain 168))
- 23s rrna (949 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis (strain 168))
- Rqc2 homolog rqch (68 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l16 (16 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l28 (6 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l36 (4 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal subunit in complex with p-trna, and yabo/rqcp (Complex from Bacillus subtilis (strain 168))
- 50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l10 (18 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis (strain 168))
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7as8
Q-score: 0.497
Crowe-McAuliffe C, Takada H, Murina V, Polte C, Kasvandik S, Tenson T, Ignatova Z, Atkinson GC, Wilson DN, Hauryliuk V
Mol Cell (2021) 81 pp. 115- [ DOI: doi:10.1016/j.molcel.2020.11.002 Pubmed: 33259810 ]
- 50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis (strain 168))
- Rqc2 homolog rqch (68 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l11 (14 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l16 (16 kDa, Protein from Bacillus subtilis (strain 168))
- 23s rrna (949 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l35 (7 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis (strain 168))
- 5s rrna (38 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l36 (4 kDa, Protein from Bacillus subtilis (strain 168))
- Rqch (Complex from Bacillus subtilis (strain 168))
- 50s ribosomal protein l33 1 (5 kDa, Protein from Bacillus subtilis (strain 168))
- Trna-ala-1-1 (24 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
- 50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal subunit in complex with p-trna, and yabo/rqcp (Complex from Bacillus subtilis (strain 168))
- 50s ribosomal protein l28 (6 kDa, Protein from Bacillus subtilis (strain 168))
- Uncharacterized protein yabo (9 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l27 (10 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal subunit in complex with rqch, p-trna, and yabo/rqcp (1 MDa, Complex)
- 50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l24 (11 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis (strain 168))
- 50s ribosomal protein l10 (18 kDa, Protein from Bacillus subtilis (strain 168))