Spraguea lophii ribosome dimer
Resolution: 14.3 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8p60
Q-score: 0.054
McLaren M, Conners R, Isupov MN, Gil-Diez P, Gambelli L, Gold VAM, Walter A, Connell SR, Williams B, Daum B
Nat Microbiol (2023) 8 pp. 1834-1845 [ Pubmed: 37709902 DOI: doi:10.1038/s41564-023-01469-w ]
- 60s ribosomal protein l19 (19 kDa, Protein from Spraguea lophii 42 110)
- Rna 28s (849 kDa, RNA from Spraguea lophii 42 110)
- Ribosomal protein l23 (15 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s7 (19 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s15a (14 kDa, Protein from Spraguea lophii 42 110)
- Ribosome (Complex from Spraguea lophii 42 110)
- Dnl-type domain-containing protein (17 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s2 (27 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s1 (25 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein s12/s23 (15 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l35a (12 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein l24e (15 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s25 (14 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l17 (19 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s14 (14 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein l15 (24 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l13 (19 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l11 (19 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l22 (12 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l5 (33 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s16 (16 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l37 (10 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l27 (18 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s26 (11 kDa, Protein from Spraguea lophii 42 110)
- Ubiquitin/40s ribosomal protein s27a fusion (16 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s13 (16 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s8 (19 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l18 (21 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s4 (31 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein s21e (7 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l37a (10 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l7 (27 kDa, Protein from Spraguea lophii 42 110)
- S60 ribosomal protein l10 (25 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s27 (9 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l36 (11 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l9 (21 kDa, Protein from Spraguea lophii 42 110)
- Guanine nucleotide binding protein beta subunit (36 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein l13a (22 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s20 (13 kDa, Protein from Spraguea lophii 42 110)
- Rna 16s (444 kDa, RNA from Spraguea lophii 42 110)
- 40s ribosomal protein s19 (16 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l3 (12 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s28 (7 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l8 (23 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l8 (27 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein s19 (18 kDa, Protein from Spraguea lophii 42 110)
- Rna 5s (38 kDa, RNA from Spraguea lophii 42 110)
- 60s ribosomal protein l31 (12 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s10 (12 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s0 (26 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal l29 protein (14 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l4 (37 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s5 (21 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s24 (17 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein l34 (12 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s9 (21 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l39 (6 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l44 (11 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s6 (26 kDa, Protein from Spraguea lophii 42 110)
- Ubiquitin (14 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l23a (12 kDa, Protein from Spraguea lophii 42 110)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l26 (15 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s18 (18 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s11 (18 kDa, Protein from Spraguea lophii 42 110)
- Transposase (13 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l3 (44 kDa, Protein from Spraguea lophii 42 110)
- Ribosomal protein l18e/l15p (16 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l32 (16 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s12 (14 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l6 (20 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s3 (27 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l21 (18 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s17 (14 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s29 (7 kDa, Protein from Spraguea lophii 42 110)
- 60s ribosomal protein l20 (20 kDa, Protein from Spraguea lophii 42 110)
- 40s ribosomal protein s30 (6 kDa, Protein from Spraguea lophii 42 110)
70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Resolution: 13.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7pia
Q-score: 0.087
Xue L, Lenz S, Zimmermann-Kogadeeva M, Tegunov D, Cramer P, Bork P, Rappsilber J, Mahamid J
Nature (2022) 610 pp. 205-211 [ DOI: doi:10.1038/s41586-022-05255-2 Pubmed: 36171285 ]
- 50s ribosomal protein l5 (20 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s21 (7 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l11 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l29 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l27 (11 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l28 (7 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l24 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- Cryo-electron tomograms of spectinomycin-treated mycoplasma pneumoniae cells (Cell from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s5 (24 kDa, Protein from Mycoplasma pneumoniae M129)
- 5s ribosomal rna (34 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s10 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l9 (17 kDa, Protein from Mycoplasma pneumoniae (strain ATCC 29342 / M129))
- 50s ribosomal protein l17 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l23 (25 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l19 (13 kDa, Protein from Mycoplasma pneumoniae (strain ATCC 29342 / M129))
- 50s ribosomal protein l2 (31 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l20 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s2 (33 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l35 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s8 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 23s ribosomal rna (940 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s11 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s6 (25 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l13 (16 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s15 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l3 (31 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s14 type z (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l6 (20 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l21 (11 kDa, Protein from Mycoplasma pneumoniae M129)
- Trna-phe (24 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s16 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l22 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l33 1 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s9 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s12 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l31 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l10 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l16 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s17 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s18 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l15 (16 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l18 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 16s ribosomal rna (491 kDa, RNA from Mycoplasma pneumoniae M129)
70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Resolution: 12.1 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7pir
Q-score: 0.104
Xue L, Lenz S, Zimmermann-Kogadeeva M, Tegunov D, Cramer P, Bork P, Rappsilber J, Mahamid J
Nature (2022) 610 pp. 205-211 [ DOI: doi:10.1038/s41586-022-05255-2 Pubmed: 36171285 ]
- 50s ribosomal protein l5 (20 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s21 (7 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l9 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l11 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l29 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l27 (11 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l28 (7 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l24 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s5 (24 kDa, Protein from Mycoplasma pneumoniae M129)
- 5s ribosomal rna (34 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s10 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l17 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l23 (25 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l2 (31 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l19 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l20 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s2 (33 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l35 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s8 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 23s ribosomal rna (940 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s11 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s6 (25 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l13 (16 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s15 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l3 (31 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s14 type z (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l6 (20 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l21 (11 kDa, Protein from Mycoplasma pneumoniae M129)
- Trna-phe (24 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- Cryo-electron tomograms of pseudouridimycin-treated mycoplasma pneumoniae cells (Cell from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s16 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l22 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l33 1 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s9 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s12 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l31 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l10 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l16 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s17 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s18 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l15 (16 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l18 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 16s ribosomal rna (491 kDa, RNA from Mycoplasma pneumoniae M129)
Resolution: 15.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7pis
Q-score: 0.082
Xue L, Lenz S, Zimmermann-Kogadeeva M, Tegunov D, Cramer P, Bork P, Rappsilber J, Mahamid J
Nature (2022) 610 pp. 205-211 [ DOI: doi:10.1038/s41586-022-05255-2 Pubmed: 36171285 ]
- 50s ribosomal protein l5 (20 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s13 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s21 (7 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l36 (4 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s20 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l9 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l7/l12 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l11 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l34 (5 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l29 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l27 (11 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l28 (7 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l24 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s5 (24 kDa, Protein from Mycoplasma pneumoniae M129)
- 5s ribosomal rna (34 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s10 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l17 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l23 (25 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l2 (31 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l32 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l19 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l20 (14 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l35 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s2 (33 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s8 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 23s ribosomal rna (940 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s11 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s6 (25 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l13 (16 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s15 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l3 (31 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s14 type z (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l6 (20 kDa, Protein from Mycoplasma pneumoniae M129)
- Elongation factor g (76 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l21 (11 kDa, Protein from Mycoplasma pneumoniae M129)
- Trna-phe (24 kDa, RNA from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s7 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- Cryo-electron tomograms of pseudouridimycin-treated mycoplasma pneumoniae cells (Cell from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s16 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s3 (30 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l14 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l22 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l33 1 (6 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s9 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s12 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s4 (23 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l31 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l10 (17 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l16 (15 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s17 (9 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s19 (10 kDa, Protein from Mycoplasma pneumoniae M129)
- 30s ribosomal protein s18 (12 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l15 (16 kDa, Protein from Mycoplasma pneumoniae M129)
- 50s ribosomal protein l18 (13 kDa, Protein from Mycoplasma pneumoniae M129)
- 16s ribosomal rna (491 kDa, RNA from Mycoplasma pneumoniae M129)
Resolution: 14.0 Å
EM Method: Single-particle
Fitted PDBs: 6vyt
Q-score: 0.036
Wang C, Molodtsov V, Firlar E, Kaelber JT, Blaha G, Su M, Ebright RH
Science (2020) 369 pp. 1359-1365 [ DOI: doi:10.1126/science.abb5317 Pubmed: 32820061 ]
- Dna-directed rna polymerase subunit beta' (155 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
- 16s rrna (499 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- E-site and p-site trna (fmet) (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- T dna (10 kDa, DNA from synthetic construct)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit beta (150 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- Nt dna (11 kDa, DNA from synthetic construct)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- Mrna in the ribosomal rna entrance pore (873 Da, RNA from synthetic construct)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- Mrna with a 15 nt long spacer (10 kDa, RNA from synthetic construct)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- Dna-directed rna polymerase subunit alpha (36 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- Transcription termination/antitermination protein nusg (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- Escherichia coli transcription-translation complex a2 (ttc-a2) containing a 15 nt long mrna spacer, nusg, and fmet-trnas at p-site and e-site (Complex from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s1 (61 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)