Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 9f1b
Q-score: 0.475
Lentzsch AM, Yudin D, Gamerdinger M, Chandrasekar S, Rabl L, Scaiola A, Deuerling E, Ban N, Shan SO
Nature (2024) 633 pp. 718-724 [ DOI: doi:10.1038/s41586-024-07846-7 Pubmed: 39169182 ]
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s19 (16 kDa, Protein from Oryctolagus cuniculus)
- Human nata/e complex (Complex)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l22 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Rabbit ribosome-nascent chain complex (Complex from Oryctolagus cuniculus)
- Ribosomal protein ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul2 (28 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l23en domain-containing protein (17 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Mrna (543 Da, RNA from Oryctolagus cuniculus)
- Human nac heterodimer (Complex from Homo sapiens)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el28 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Oryctolagus cuniculus)
- Ubiquitin-ribosomal protein el40 fusion protein (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el34 (13 kDa, Protein from Oryctolagus cuniculus)
- Spermidine (145 Da, Ligand)
- 40s ribosomal protein s29 (6 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- Inositol hexakisphosphate (660 Da, Ligand)
- 40s ribosomal protein s9 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- Spermine (202 Da, Ligand)
- Small ribosomal subunit protein us2 (32 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- Human nata (Complex from Homo sapiens)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s27a (18 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el13 (24 kDa, Protein from Oryctolagus cuniculus)
- Nascent chain (2 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s2 (31 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l7a (30 kDa, Protein from Oryctolagus cuniculus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us9 (19 kDa, Protein from Oryctolagus cuniculus)
- Unknown atom or ion (145 Da, Ligand)
- Ternary complex of a translating ribosome, nac and nata/e (3 MDa, Complex)
- 60s ribosomal protein l39-like (6 kDa, Protein from Oryctolagus cuniculus)
- Nascent polypeptide-associated complex subunit alpha (25 kDa, Protein from Homo sapiens)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el42 (12 kDa, Protein from Oryctolagus cuniculus)
- P-site trna (15 kDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul22 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l3 (46 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- N-alpha-acetyltransferase 15, nata auxiliary subunit (106 kDa, Protein from Homo sapiens)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- N-alpha-acetyltransferase 10 (26 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l12 (17 kDa, Protein from Oryctolagus cuniculus)
- Transcription factor btf3 (17 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein es26 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- Glutathione s-transferase class-mu 26 kda isozyme,n-alpha-acetyltransferase 50 (46 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4 (46 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- Human nate with a gst tag (Complex from Homo sapiens)
- Large ribosomal subunit protein ul18 (34 kDa, Protein from Oryctolagus cuniculus)
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
Resolution: 3.78 Å
EM Method: Single-particle
Fitted PDBs: 9f1c
Q-score: 0.371
Lentzsch AM, Yudin D, Gamerdinger M, Chandrasekar S, Rabl L, Scaiola A, Deuerling E, Ban N, Shan SO
Nature (2024) 633 pp. 718-724 [ DOI: doi:10.1038/s41586-024-07846-7 Pubmed: 39169182 ]
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Human methionine aminopeptidase 1 (Complex from Homo sapiens)
- Small ribosomal subunit protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us5 (31 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s19 (16 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el40 (14 kDa, Protein from Oryctolagus cuniculus)
- Human nata/e complex (Complex)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l22 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Rabbit ribosome-nascent chain complex (Complex from Oryctolagus cuniculus)
- Ribosomal protein ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul2 (28 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l23en domain-containing protein (17 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Mrna (543 Da, RNA from Oryctolagus cuniculus)
- Unknown atom or ion (Ligand)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el28 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Spermidine (145 Da, Ligand)
- 40s ribosomal protein s29 (6 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Inositol hexakisphosphate (660 Da, Ligand)
- 40s ribosomal protein s9 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- Spermine (202 Da, Ligand)
- Small ribosomal subunit protein us2 (32 kDa, Protein from Oryctolagus cuniculus)
- Nascent chain (2 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- Methionine aminopeptidase 1 (43 kDa, Protein from Homo sapiens)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s27a (18 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el13 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l7a (30 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Oryctolagus cuniculus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us9 (19 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l39-like (6 kDa, Protein from Oryctolagus cuniculus)
- Nascent polypeptide-associated complex subunit alpha (25 kDa, Protein from Homo sapiens)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el42 (12 kDa, Protein from Oryctolagus cuniculus)
- P-site trna (15 kDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul22 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l3 (46 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- N-alpha-acetyltransferase 15, nata auxiliary subunit (106 kDa, Protein from Homo sapiens)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- N-alpha-acetyltransferase 10 (26 kDa, Protein from Homo sapiens)
- Human nata complex (Complex from Homo sapiens)
- 60s ribosomal protein l12 (17 kDa, Protein from Oryctolagus cuniculus)
- Transcription factor btf3 (17 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Nac heterodimer (Complex from Homo sapiens)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein es26 (13 kDa, Protein from Oryctolagus cuniculus)
- Quaternary complex of a translating 80s ribosome, nac, metap1 and nata/e (3 MDa, Complex)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- Glutathione s-transferase class-mu 26 kda isozyme,n-alpha-acetyltransferase 50 (46 kDa, Protein from Homo sapiens)
- Large ribosomal subunit protein ul4 (46 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- Human nate with a gst tag (Complex from Homo sapiens)
- Large ribosomal subunit protein ul18 (34 kDa, Protein from Oryctolagus cuniculus)
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 9f1d
Q-score: 0.447
Lentzsch AM, Yudin D, Gamerdinger M, Chandrasekar S, Rabl L, Scaiola A, Deuerling E, Ban N, Shan SO
Nature (2024) 633 pp. 718-724 [ DOI: doi:10.1038/s41586-024-07846-7 Pubmed: 39169182 ]
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Human methionine aminopeptidase 1 (Complex from Homo sapiens)
- Small ribosomal subunit protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us5 (31 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s19 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (18 kDa, Protein from Oryctolagus cuniculus)
- Quaternary complex of a translating 80s ribosome, nac, metap1 and nata/e-hypk (3 MDa, Complex)
- 60s ribosomal protein l22 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l37a (10 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Rabbit ribosome-nascent chain complex (Complex from Oryctolagus cuniculus)
- Ribosomal protein ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul2 (28 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Mrna (543 Da, RNA from Oryctolagus cuniculus)
- Unknown atom or ion (Ligand)
- Human nac heterodimer (Complex from Homo sapiens)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el28 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Oryctolagus cuniculus)
- Ubiquitin-ribosomal protein el40 fusion protein (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Spermidine (145 Da, Ligand)
- 40s ribosomal protein s29 (6 kDa, Protein from Oryctolagus cuniculus)
- Nascent chain (2 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Inositol hexakisphosphate (660 Da, Ligand)
- 40s ribosomal protein s9 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- Spermine (202 Da, Ligand)
- Small ribosomal subunit protein us2 (32 kDa, Protein from Oryctolagus cuniculus)
- Glutathione s-transferase class-mu 26 kda isozyme,n-alpha-acetyltransferase 50,n-alpha-acetyltransferase 50 (46 kDa, Protein from Homo sapiens)
- 40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- Methionine aminopeptidase 1 (43 kDa, Protein from Homo sapiens)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el8 (30 kDa, Protein from Oryctolagus cuniculus)
- Human hypk (Complex from Homo sapiens)
- 40s ribosomal protein s12 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s27a (18 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el13 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Oryctolagus cuniculus)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein us9 (19 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l39-like (6 kDa, Protein from Oryctolagus cuniculus)
- Nascent polypeptide-associated complex subunit alpha (25 kDa, Protein from Homo sapiens)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul10 (34 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein el42 (12 kDa, Protein from Oryctolagus cuniculus)
- P-site trna (15 kDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Human nata/e-hypk complex (Complex)
- Large ribosomal subunit protein ul22 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Oryctolagus cuniculus)
- Isoform 2 of transcription factor btf3 (17 kDa, Protein from Homo sapiens)
- Ribosomal protein l3 (46 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul23 (17 kDa, Protein from Oryctolagus cuniculus)
- Isoform 2 of huntingtin-interacting protein k (26 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- N-alpha-acetyltransferase 15, nata auxiliary subunit (106 kDa, Protein from Homo sapiens)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- N-alpha-acetyltransferase 10 (26 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l12 (17 kDa, Protein from Oryctolagus cuniculus)
- Human nata complex (Complex from Homo sapiens)
- Water (18 Da, Ligand)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- Small ribosomal subunit protein es26 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- Large ribosomal subunit protein ul4 (46 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- Human nate with a gst tag (Complex from Homo sapiens)
- Large ribosomal subunit protein ul18 (34 kDa, Protein from Oryctolagus cuniculus)
Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ipa
Q-score: 0.471
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]
- 40s ribosomal protein us8 (14 kDa, Protein from Triticum aestivum)
- Trnai (24 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein us19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us2 (33 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el27 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us14 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us11 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul29 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el14 (15 kDa, Protein from Triticum aestivum)
- Mrna (2 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein el29 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el31 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us4 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es8 (25 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el22 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul6 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el15 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el30 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es10 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul15 (16 kDa, Protein from Triticum aestivum)
- Rack1 (36 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el28 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us10 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul18 (34 kDa, Protein from Triticum aestivum)
- 4-{(2r)-2-[(1s,3s,5s)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione (281 Da, Ligand)
- 60s ribosomal protein el39 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el34 (13 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul23 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal rna (1 MDa, RNA from Triticum aestivum)
- 40s ribosomal protein us9 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es6 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul4 (44 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el40 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul14 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul5 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el20 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el42 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us13 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us15 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el43 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el38 (8 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us3 (25 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein el8 (29 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es17 (16 kDa, Protein from Triticum aestivum)
- Eukaryotic release factor 1 (49 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el19 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es25 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us17 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es28 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es21 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el6 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul24 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul16 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es7 (22 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul3 (44 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein us5 (29 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es30 (6 kDa, Protein from Triticum aestivum)
- 5s ribosomal rna (38 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul13 (23 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es24 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es26 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el36 (12 kDa, Protein from Triticum aestivum)
- 5.8s ribosomal rna (51 kDa, RNA from Triticum aestivum)
- Wheat 80s ribosome stalled on aug-stop boron dependently with cycloheximide (Complex from Triticum aestivum)
- 60s ribosomal protein el37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el18 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul2 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el24 (18 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es1 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es4 (30 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- 18s ribosomal rna (583 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el13 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us12 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el41 (3 kDa, Protein from Oryza sativa)
- 60s ribosomal protein el21 (18 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein es27 (9 kDa, Protein from Triticum aestivum)
Wheat 80S ribosome pausing on AUG-Stop with cycloheximide
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ipb
Q-score: 0.466
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]
- 60s ribosomal protein el42 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul18 (34 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein el8 (29 kDa, Protein from Triticum aestivum)
- 60s ribosomal rna (1 MDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul24 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es21 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us14 (6 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el41 (3 kDa, Protein from Oryza sativa)
- 5.8s ribosomal rna (51 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein es6 (28 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us8 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el37 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el32 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul14 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul16 (24 kDa, Protein from Triticum aestivum)
- Mrna (2 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein ul15 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es25 (12 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul22 (19 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es26 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul4 (44 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us11 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el40 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el15 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul2 (28 kDa, Protein from Triticum aestivum)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein us13 (17 kDa, Protein from Triticum aestivum)
- 5s ribosomal rna (38 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein el31 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el19 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es10 (20 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el6 (24 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el36 (12 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us12 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul30 (28 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el28 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el39 (9 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el34 (13 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul5 (20 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es7 (22 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us2 (33 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es27 (9 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es1 (30 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el13 (24 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es28 (9 kDa, Protein from Triticum aestivum)
- 4-{(2r)-2-[(1s,3s,5s)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione (281 Da, Ligand)
- 60s ribosomal protein ul29 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us17 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el30 (12 kDa, Protein from Triticum aestivum)
- Trnai (24 kDa, RNA from Triticum aestivum)
- 60s ribosomal protein el21 (18 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul23 (16 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el14 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es8 (25 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us9 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es17 (16 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us10 (14 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us15 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es4 (30 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us7 (22 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el18 (21 kDa, Protein from Triticum aestivum)
- Rack1 (36 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el38 (8 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el24 (18 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es30 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es19 (17 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el27 (15 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el20 (21 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us3 (25 kDa, Protein from Triticum aestivum)
- Wheat 80s ribosome pausing on aug-stop with cycloheximide (Complex from Triticum aestivum)
- 18s ribosomal rna (583 kDa, RNA from Triticum aestivum)
- 40s ribosomal protein us4 (22 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el22 (14 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul13 (23 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el43 (10 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el29 (6 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us19 (17 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein es24 (15 kDa, Protein from Triticum aestivum)
- 40s ribosomal protein us5 (29 kDa, Protein from Triticum aestivum)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein ul3 (44 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein ul6 (21 kDa, Protein from Triticum aestivum)
- 60s ribosomal protein el33 (12 kDa, Protein from Triticum aestivum)
The structure of a 50S ribosomal subunit in the Lyme disease pathogen Borreliella burgdorferi
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8fn2
Q-score: 0.379
Sharma MR, Manjari SR, Agrawal EK, Keshavan P, Koripella RK, Majumdar S, Marcinkiewicz AL, Lin YP, Agrawal RK, Banavali NK
Nat Commun (2023) 14 pp. 6961-6961 [ Pubmed: 37907464 DOI: doi:10.1038/s41467-023-42266-7 ]
- 50s ribosomal protein l24 (11 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l29 (7 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l28 (10 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l13 (16 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l11 (14 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l14 (13 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l22 (13 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein bl38 (5 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l19 (13 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l10 (18 kDa, Protein from Borreliella burgdorferi B31)
- 23s ribosomal rna (948 kDa, RNA from Borreliella burgdorferi B31)
- 50s ribosomal protein l15 (16 kDa, Protein from Borreliella burgdorferi B31)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l21 (12 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l6 (19 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l5 (20 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l36 (4 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l20 (13 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l32 (6 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l9 (17 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l3 (22 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l4 (23 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l17 (14 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l2 (30 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l31 type b (9 kDa, Protein from Borreliella burgdorferi B31)
- 5s ribosomal rna (36 kDa, RNA from Borreliella burgdorferi B31)
- 50s ribosomal protein l35 (7 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal subunit (Complex from Borreliella burgdorferi)
- 50s ribosomal protein l34 (6 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l18 (13 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l23 (11 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l25 (20 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l27 (8 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein ul30 (11 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l16 (15 kDa, Protein from Borreliella burgdorferi B31)
- 50s ribosomal protein l33 (6 kDa, Protein from Borreliella burgdorferi B31)
Rabbit 80S ribosome programmed with SECIS and SBP2
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7zjx
Q-score: 0.428
Hilal T, Killam BY, Grozdanovic M, Dobosz-Bartoszek M, Loerke J, Burger J, Mielke T, Copeland PR, Simonovic M, Spahn CMT
Science (2022) 376 pp. 1338-1343 [ Pubmed: 35709277 DOI: doi:10.1126/science.abg3875 ]
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Guanine nucleotide-binding protein subunit beta-2-like 1 (35 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us9 (19 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (18 kDa, Protein from Oryctolagus cuniculus)
- Selenocysteine insertion sequence-binding protein 2 (Complex from Homo sapiens)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Selenocysteine insertion sequence-binding protein 2 (95 kDa, Protein from Homo sapiens)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l23en domain-containing protein (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- Gpx4 secis element (275 kDa, RNA from Rattus norvegicus)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l31 (14 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s29 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul22 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s9 (22 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el28 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l40 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- Crpv ires (52 kDa, RNA from Cricket paralysis virus)
- Ribosomal protein l32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s13 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul2 (28 kDa, Protein from Oryctolagus cuniculus)
- 80s-sbp2-secis (3 MDa, Complex)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es19 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s20 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el13 (24 kDa, Protein from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Oryctolagus cuniculus)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s18 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l18_c domain-containing protein (34 kDa, Protein from Oryctolagus cuniculus)
- 80s ribosome (Complex from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Oryctolagus cuniculus)
- Gpx4 secis element (Complex from Rattus norvegicus)
- 40s ribosomal protein es26 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- Crpv ires (Complex from Cricket paralysis virus)
- 40s ribosomal protein s15 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- Ubiquitin carboxyl extension protein 80 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el22 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l38 (8 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul3 (46 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us5 (31 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l4 (46 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (30 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s17 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7o81
Q-score: 0.447
Bhatt PR, Scaiola A, Loughran G, Leibundgut M, Kratzel A, Meurs R, Dreos R, O'Connor KM, McMillan A, Bode JW, Thiel V, Gatfield D, Atkins JF, Ban N
Science (2021) 372 pp. 1306-1313 [ DOI: doi:10.1126/science.abf3546 Pubmed: 34029205 ]
- 60s ribosomal protein l36 (12 kDa, Protein from Oryctolagus cuniculus)
- El24 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- Rabbit 80s ribosome colliding in another ribosome stalled by the sars-cov-2 pseudoknot (Complex)
- El38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l3 (46 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (21 kDa, Protein from Oryctolagus cuniculus)
- 18s rrna (603 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el22 (14 kDa, Protein from Oryctolagus cuniculus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s7 (47 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- P-site trna(pro) (24 kDa, RNA from Bos taurus)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l4 (46 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (34 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3 (31 kDa, Protein from Oryctolagus cuniculus)
- Mrna containing sars-cov-2 sequence (69 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Ribosomal protein s5 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l18_c domain-containing protein (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein el28 (15 kDa, Protein from Oryctolagus cuniculus)
- Us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l18 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (28 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- Rack1 (35 kDa, Protein from Oryctolagus cuniculus)
- Water (18 Da, Ligand)
- 60s ribosomal protein l40 (14 kDa, Protein from Oryctolagus cuniculus)
- Ul23 (17 kDa, Protein from Oryctolagus cuniculus)
- Rabbit 80s ribosome colliding in another ribosome (Complex from Bos taurus)
- A-site met-trna(met) (24 kDa, RNA from Bos taurus)
- 60s ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el13 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein sa (32 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s25 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- El31 (14 kDa, Protein from Oryctolagus cuniculus)
- El43 (10 kDa, Protein from Oryctolagus cuniculus)
- Replicase polyprotein 1ab (Complex from Severe acute respiratory syndrome coronavirus 2)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul2 (28 kDa, Protein from Oryctolagus cuniculus)
- Replicase polyprotein 1ab (121 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Ribosomal protein s27a (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s18 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l12 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el8 (30 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (30 kDa, Protein from Oryctolagus cuniculus)
- Unknown atom or ion (Ligand)
- Ribosomal protein us5 (31 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (13 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein es26 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (22 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein es4 (29 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es19 (16 kDa, Protein from Oryctolagus cuniculus)
- Sars-cov-2 pseudoknot (Complex from Severe acute respiratory syndrome coronavirus 2)
- Edf1 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es10 (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (14 kDa, Protein from Oryctolagus cuniculus)
- Spermidine (145 Da, Ligand)
- Us9 (19 kDa, Protein from Oryctolagus cuniculus)
- El30 (12 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul1 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l18a (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein ul30 (29 kDa, Protein from Oryctolagus cuniculus)
- Us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Rabbit 80s ribosome colliding in another ribosome (Complex from Oryctolagus cuniculus)
- Ribosomal protein l13a (23 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s30 (14 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- El39 (6 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 6zj3
Q-score: 0.548
Matzov D, Taoka M, Nobe Y, Yamauchi Y, Halfon Y, Asis N, Zimermann E, Rozenberg H, Bashan A, Bhushan S, Isobe T, Gray MW, Yonath A, Shalev-Benami M
Nucleic Acids Res (2020) 48 pp. 11750-11761 [ DOI: doi:10.1093/nar/gkaa893 Pubmed: 33091122 ]
- Ribosomal protein es31 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul22 (18 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 10 (20 kDa, RNA from Euglena gracilis)
- Ribosomal protein el39 (6 kDa, Protein from Euglena gracilis)
- Ribosomal protein us13 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul6 (22 kDa, Protein from Euglena gracilis)
- Ribosomal protein el13 (25 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul18 (29 kDa, Protein from Euglena gracilis)
- Ribosomal protein el31 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein el19 (29 kDa, Protein from Euglena gracilis)
- Ribosomal protein us10 (13 kDa, Protein from Euglena gracilis)
- Ribosomal protein us12 (15 kDa, Protein from Euglena gracilis)
- Ribosomal protein el15 (24 kDa, Protein from Euglena gracilis)
- Ribosomal protein el40 (14 kDa, Protein from Euglena gracilis)
- Ribosomal protein us8 (14 kDa, Protein from Euglena gracilis)
- 18s rrna (747 kDa, RNA from Euglena gracilis)
- Ribosomal protein el33 (13 kDa, Protein from Euglena gracilis)
- 60s ribosomal protein l10 (24 kDa, Protein from Euglena gracilis)
- Ribosomal protein es26 (13 kDa, Protein from Euglena gracilis)
- Ribosomal protein el32 (16 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul29 (14 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul24 (16 kDa, Protein from Euglena gracilis)
- E-trna (24 kDa, RNA from Euglena gracilis)
- Lsu rrna chain 7 (240 kDa, RNA from Euglena gracilis)
- Ribosomal protein us4 (22 kDa, Protein from Euglena gracilis)
- Ribosomal protein es10 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein elegr2 (8 kDa, Protein from Euglena gracilis)
- Ribosomal protein el22 (18 kDa, Protein from Euglena gracilis)
- Ribosomal protein us2 (29 kDa, Protein from Euglena gracilis)
- Ribosomal protein us5 (27 kDa, Protein from Euglena gracilis)
- Ribosomal protein us17 (19 kDa, Protein from Euglena gracilis)
- 60s ribosomal protein l7a (32 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 2 (113 kDa, RNA from Euglena gracilis)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein us7 (21 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul13 (24 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 3 (37 kDa, RNA from Euglena gracilis)
- Ribosomal protein el34 (14 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul3 (46 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul30 (28 kDa, Protein from Euglena gracilis)
- Ribosomal protein el30 (12 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul2 (28 kDa, Protein from Euglena gracilis)
- Ribosomal protein es19 (16 kDa, Protein from Euglena gracilis)
- Ribosomal protein es24 (16 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul15 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein el37 (13 kDa, Protein from Euglena gracilis)
- P-trna (24 kDa, RNA from Euglena gracilis)
- Lsu rrna chain 4 (225 kDa, RNA from Euglena gracilis)
- Ribosomal protein el29 (13 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 9 (52 kDa, RNA from Euglena gracilis)
- Ribosomal protein es21 (10 kDa, Protein from Euglena gracilis)
- Ribosomal protein es25 (13 kDa, Protein from Euglena gracilis)
- Ribosomal protein el20 (21 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 1 (42 kDa, RNA from Euglena gracilis)
- Ribosomal protein el27 (15 kDa, Protein from Euglena gracilis)
- Ribosomal protein el24 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein el14 (25 kDa, Protein from Euglena gracilis)
- Ribosomal protein es28 (8 kDa, Protein from Euglena gracilis)
- Ribosomal protein el43 (12 kDa, Protein from Euglena gracilis)
- Ribosomal protein es17 (16 kDa, Protein from Euglena gracilis)
- Ribosomal protein el38 (9 kDa, Protein from Euglena gracilis)
- Ribosomal protein el41 (4 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 11 (30 kDa, RNA from Euglena gracilis)
- Lsu rrna chain 13 (27 kDa, RNA from Euglena gracilis)
- A-trna (24 kDa, RNA from Euglena gracilis)
- Ribosomal protein es1 (28 kDa, Protein from Euglena gracilis)
- Ribosomal protein elegr1 (7 kDa, Protein from Euglena gracilis)
- A-site trna (3 kDa, RNA from Euglena gracilis)
- Lsu rrna chain 5 (170 kDa, RNA from Euglena gracilis)
- Rack1 (34 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul23 (18 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 6 (75 kDa, RNA from Euglena gracilis)
- Ribosomal protein el21 (18 kDa, Protein from Euglena gracilis)
- Ribosomal protein us15 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein us11 (16 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 12 (18 kDa, RNA from Euglena gracilis)
- Ribosomal protein el18 (21 kDa, Protein from Euglena gracilis)
- Ribosomal protein es30 (7 kDa, Protein from Euglena gracilis)
- Ribosomal protein us14 (6 kDa, Protein from Euglena gracilis)
- Ribosomal protein us3 (24 kDa, Protein from Euglena gracilis)
- Ribosomal protein el42 (10 kDa, Protein from Euglena gracilis)
- Ribosomal protein es6 (31 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul5 (21 kDa, Protein from Euglena gracilis)
- Ribosomal protein es27 (9 kDa, Protein from Euglena gracilis)
- 5s rrna (38 kDa, RNA from Euglena gracilis)
- Ribosomal protein ul14 (14 kDa, Protein from Euglena gracilis)
- Ribosomal protein ul4 (41 kDa, Protein from Euglena gracilis)
- Lsu rrna chain 8 (199 kDa, RNA from Euglena gracilis)
- Water (18 Da, Ligand)
- Ribosomal protein elegr3 (7 kDa, Protein from Euglena gracilis)
- Ribosomal protein us19 (17 kDa, Protein from Euglena gracilis)
- 5.8s rrna (52 kDa, RNA from Euglena gracilis)
- Euglena gracilis 80s ribosome (Complex from Euglena gracilis)
- Ribosomal protein eseug1 (32 kDa, Protein from Euglena gracilis)
- Ribosomal protein es8 (35 kDa, Protein from Euglena gracilis)
- Ribosomal protein es12 (15 kDa, Protein from Euglena gracilis)
- Ribosomal protein es7 (22 kDa, Protein from Euglena gracilis)
- Ribosomal protein us9 (17 kDa, Protein from Euglena gracilis)
- Ribosomal protein el6 (22 kDa, Protein from Euglena gracilis)
- Ribosomal protein es4 (31 kDa, Protein from Euglena gracilis)
- Ribosomal protein el36 (12 kDa, Protein from Euglena gracilis)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6gz3
Q-score: 0.365
Flis J, Holm M, Rundlet EJ, Loerke J, Hilal T, Dabrowski M, Burger J, Mielke T, Blanchard SC, Spahn CMT, Budkevich TV
Cell Rep (2018) 25 pp. 2676-2688.e7 [ Pubmed: 30517857 DOI: doi:10.1016/j.celrep.2018.11.040 ]
- Ribosomal protein us19 (14 kDa, Protein from Rabbit)
- Ribosomal protein es17 (14 kDa, Protein from Rabbit)
- Ribosomal protein s28 (7 kDa, Protein from Rabbit)
- Ribosomal protein s11 (17 kDa, Protein from Rabbit)
- Ribosomal protein el40 (5 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l8 (27 kDa, Protein from Rabbit)
- Ribosomal protein rack 1 (34 kDa, Protein from Rabbit)
- Ribosomal protein ul10 (22 kDa, Protein from Rabbit)
- 40s ribosomal protein s7 (20 kDa, Protein from Rabbit)
- Ribosomal protein ul15 (16 kDa, Protein from Rabbit)
- Ribosomal protein ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es27 (9 kDa, Protein from Rabbit)
- Ribosomal protein ul6 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es21 (8 kDa, Protein from Rabbit)
- 60s ribosomal protein l27 (15 kDa, Protein from Rabbit)
- Ribosome (Complex from Oryctolagus cuniculus)
- Ribosomal protein ul30 (27 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el34 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (24 kDa, Protein from Rabbit)
- Ribosomal protein s27a (8 kDa, Protein from Rabbit)
- Ribosomal protein el42 (12 kDa, Protein from Rabbit)
- Ribosomal protein es4 (28 kDa, Protein from Rabbit)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Rabbit)
- Ribosomal protein el43 (10 kDa, Protein from Rabbit)
- Ribosomal protein l15 (24 kDa, Protein from Rabbit)
- 28s ribosomal rna (1 MDa, RNA from Rabbit)
- 40s ribosomal protein s12 (13 kDa, Protein from Rabbit)
- Ribosomal protein ul4 (41 kDa, Protein from Rabbit)
- Ribosomal protein el8 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Rabbit)
- Ribosomal protein el24 (14 kDa, Protein from Rabbit)
- Ribosomal protein us9 (15 kDa, Protein from Rabbit)
- Ribosomal protein es25 (9 kDa, Protein from Rabbit)
- Ribosomal protein es26 (11 kDa, Protein from Rabbit)
- Ribosomal protein el21 (18 kDa, Protein from Rabbit)
- Ribosomal protein l23 (13 kDa, Protein from Rabbit)
- Ribosomal protein el39 (6 kDa, Protein from Rabbit)
- Ribosomal protein us11 (14 kDa, Protein from Rabbit)
- 5.8s ribosomal rna (50 kDa, RNA from Rabbit)
- Ribosomal protein el13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l12 (16 kDa, Protein from Rabbit)
- Ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es24 (14 kDa, Protein from Rabbit)
- Ribosomal protein us13 (16 kDa, Protein from Rabbit)
- 18s ribosomal rna (551 kDa, RNA from Rabbit)
- Ap/p-site trna (24 kDa, RNA from Rabbit)
- Ribosomal protein (24 kDa, Protein from Rabbit)
- 40s ribosomal protein s6 (26 kDa, Protein from Rabbit)
- Ribosomal protein el14 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us3 (24 kDa, Protein from Rabbit)
- Ribosomal protein us14 (6 kDa, Protein from Rabbit)
- Trna (Complex from Saccharomyces cerevisiae)
- Ribosomal protein el29 (7 kDa, Protein from Rabbit)
- Ribosomal protein ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic elongation factor 2 (eef2) (95 kDa, Protein from Rabbit)
- Ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es8 (24 kDa, Protein from Rabbit)
- Ribosomal protein l37 (9 kDa, Protein from Rabbit)
- Ribosomal protein el6 (22 kDa, Protein from Rabbit)
- Ribosomal protein es30 (6 kDa, Protein from Rabbit)
- Ribosomal protein ul3 (45 kDa, Protein from Rabbit)
- Ribosomal protein us5 (24 kDa, Protein from Rabbit)
- Ribosomal protein el32 (15 kDa, Protein from Rabbit)
- Ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el30 (11 kDa, Protein from Rabbit)
- Mrna (3 kDa, RNA from Enterobacteria phage SP6)
- Ribosomal protein el36 (11 kDa, Protein from Rabbit)
- 40s ribosomal protein s3a (24 kDa, Protein from Rabbit)
- Pe/e-site-trna (24 kDa, RNA from Saccharomyces cerevisiae)
- Ribosomal protein es10 (11 kDa, Protein from Rabbit)
- Ribosomal protein us10 (11 kDa, Protein from Rabbit)
- Ribosomal protein l26 (15 kDa, Protein from Rabbit)
- Ribosomal protein ul13 (22 kDa, Protein from Oryctolagus cuniculus)
- Mrna (Complex from Enterobacteria phage SP6)
- Ribosomal protein el33 (12 kDa, Protein from Rabbit)
- Ribosomal protein us15 (17 kDa, Protein from Rabbit)
- Translocation intermediate ti-post-1 (4 MDa, Complex)
- Ribosomal protein es19 (15 kDa, Protein from Rabbit)
- Ribosomal protein l11 (19 kDa, Protein from Rabbit)
- Ribosomal protein s5 (21 kDa, Protein from Rabbit)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- Ribosomal protein el28 (13 kDa, Protein from Rabbit)
- Ribosomal protein ul18 (34 kDa, Protein from Rabbit)
- Ribosomal protein s15a (14 kDa, Protein from Rabbit)
- Ribosomal protein us2 (24 kDa, Protein from Rabbit)
- Ribosomal protein el31 (12 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein ul23 (13 kDa, Protein from Rabbit)
- Ribosomal protein el22 (11 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Rabbit)
- Ribosomal protein el41 (3 kDa, Protein from Oryctolagus cuniculus)