RNC in complex with a translocating SecYEG
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 5gae
Q-score: 0.441
Jomaa A, Boehringer D, Leibundgut M, Ban N
Nat Commun (2016) 7 pp. 10471-10471 [ DOI: doi:10.1038/ncomms10471 Pubmed: 26804923 ]
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- Protein translocase subunit sece (13 kDa, Protein from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- Secg (2 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- Protein translocase subunit secy (48 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l10 (17 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- Ribosome nascent chain secyeg complex (2 MDa, Complex from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- Trna cca end (5'-r(p*cp*cp*a)-3') (894 Da, RNA from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli)
Structure of the SecY protein translocation channel in action
Resolution: 10.1 Å
EM Method: Single-particle
Fitted PDBs: 3j46
Q-score: 0.079
Park E, Menetret JF, Gumbart JC, Ludtke SJ, Li W, Whynot A, Rapoport TA, Akey CW
Nature (2014) 506 pp. 102-106 [ Pubmed: 24153188 DOI: doi:10.1038/nature12720 ]
- Membrane-bound 70s ribosome (2 MDa, Complex from Escherichia coli)
- Preprotein translocase (73 kDa, Protein from Escherichia coli)
- Transfer rna (25 kDa, RNA from Escherichia coli)
- S1p (61 kDa, Protein from Escherichia coli)
- Ribosome-nascent chain-secyeg complex (2 MDa, Sample)