Tail channel of phage 812 virion (C1)
Cienikova Z, Novacek J, Siborova M, Popelarova B, Fuzik T, Benesik M, Bardy P, Plevka P
To Be Published
Tail channel of phage 812 virion (C3)
Cienikova Z, Novacek J, Siborova M, Popelarova B, Fuzik T, Benesik M, Bardy P, Plevka P
To Be Published
Neck of phage 812 after tail contraction (C6)
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 8q01
Q-score: 0.528
Cienikova Z, Novacek J, Siborova M, Popelarova B, Fuzik T, Benesik M, Bardy P, Plevka P
To Be Published
- Zinc ion (65 Da, Ligand)
- Staphylococcus phage 812 (Virus from Staphylococcus phage 812)
- Tail tube protein (15 kDa, Protein from Staphylococcus phage 812)
- Adaptor protein (34 kDa, Protein from Staphylococcus phage 812)
- Tail terminator protein (31 kDa, Protein from Staphylococcus phage 812)
- Tail sheath protein (64 kDa, Protein from Staphylococcus phage 812)
- Capsid protein (33 kDa, Protein from Staphylococcus phage 812)
Resolution: 10.47 Å
EM Method: Single-particle
Fitted PDBs: 6tui
Q-score: 0.08
Bardy P, Fuzik T, Hrebik D, Pantucek R, Beatty JT, Plevka P
Nat Commun (2020) 11 pp. 3034- [ Pubmed: 32541663 DOI: doi:10.1038/s41467-020-16669-9 ]
- Uncharacterized protein (32 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Adaptor protein rcc01688 (20 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Uncharacterized protein (9 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Capsid (5 MDa, Complex from Rhodobacter capsulatus SB 1003)
- Portal protein rcc01684 (42 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Tail terminator protein rcc01690 (13 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Stopper protein rcc01689 (12 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Rhodobacter capsulatus de442 (8 MDa, Virus)
- Tail tube protein rcc01691 (14 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Connector (760 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Head spike (80 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Tail (730 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Phage major capsid protein, hk97 family (40 kDa, Protein from Rhodobacter capsulatus SB 1003)
Tail-baseplate interface of native GTA particle computed with C6 symmetry
Resolution: 4.14 Å
EM Method: Single-particle
Fitted PDBs: 6teb
Q-score: 0.352
Bardy P, Fuzik T, Hrebik D, Pantucek R, Thomas Beatty J, Plevka P
Nat Commun (2020) 11 pp. 3034-3034 [ Pubmed: 32541663 DOI: doi:10.1038/s41467-020-16669-9 ]
Neck of empty GTA particle computed with C6 symmetry
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 6toa
Q-score: 0.513
Bardy P, Fuzik T, Hrebik D, Pantucek R, Thomas Beatty J, Plevka P
Nat Commun (2020) 11 pp. 3034-3034 [ Pubmed: 32541663 DOI: doi:10.1038/s41467-020-16669-9 ]
- Tail tube protein rcc01691 (14 kDa, Protein from Rhodobacter capsulatus DE442)
- Tail terminator protein rcc01690 (13 kDa, Protein from Rhodobacter capsulatus DE442)
- Connector (Complex from Rhodobacter capsulatus DE442)
- Stopper protein rcc01689 (12 kDa, Protein from Rhodobacter capsulatus DE442)
- Tail (Complex from Rhodobacter capsulatus DE442)
- Portal protein rcc01684 (42 kDa, Protein from Rhodobacter capsulatus DE442)
- Adaptor protein rcc01688 (20 kDa, Protein from Rhodobacter capsulatus DE442)
- Rhodobacter capsulatus de442 gene transfer agent neck (240 kDa, Complex from Rhodobacter capsulatus DE442)
Tail of empty GTA particle computed with helical refinement, C6 symmetry
Resolution: 3.78 Å
EM Method: Helical reconstruction
Fitted PDBs: 6tsv
Q-score: 0.468
Bardy P, Fuzik T, Hrebik D, Pantucek R, Thomas Beatty J, Plevka P
Nat Commun (2020) 11 pp. 3034-3034 [ Pubmed: 32541663 DOI: doi:10.1038/s41467-020-16669-9 ]
Tail tube of native GTA particle computed with C3 symmetry
Bardy P, Fuzik T, Hrebik D, Pantucek R, Thomas Beatty J, Plevka P
Nat Commun (2020) 11 pp. 3034-3034 [ Pubmed: 32541663 DOI: doi:10.1038/s41467-020-16669-9 ]