The Cryo-EM structure of DSR2-Tail tube-NAD+ complex
Wang R, Xu Q, Wu Z, Li J, Guo H, Liao T, Shi Y, Yuan L, Gao H, Yang R, Shi Z, Li F
Nat Commun (2024) 15 pp. 6185-6185 [ DOI: doi:10.1038/s41467-024-50410-0 Pubmed: 39039073 ]
- Tail tube protein (29 kDa, Protein from Bacillus subtilis)
- Sir2-like domain-containing protein (118 kDa, Protein from Bacillus subtilis)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Dsr2-tail tube protein-nad+ complex (Complex from Bacillus subtilis)
Cryo-EM structure of tail tube protein
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8xkn
Q-score: 0.542
Yin H, Li X, Wang X, Zhang C, Gao J, Yu G, He Q, Yang J, Liu X, Wei Y, Li Z, Zhang H
Nat Commun (2024) 15 pp. 2692-2692 [ DOI: doi:10.1038/s41467-024-47030-z Pubmed: 38538592 ]
- Cryo-em structure of tail tube protein (Complex from Bacillus halotolerans)
- A protein (29 kDa, Protein from Bacillus halotolerans)
Baseplate of DT57C bacteriophage in the full state
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8hqz
Q-score: 0.446
Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M
Nat Commun (2023) 14 pp. 8205-8205 [ DOI: doi:10.1038/s41467-023-43824-9 Pubmed: 38081816 ]
- Minor tail protein (34 kDa, Protein from Escherichia phage DT57C)
- Tape measure protein (132 kDa, Protein from Escherichia phage DT57C)
- Distal tail protein (22 kDa, Protein from Escherichia phage DT57C)
- Tail tube protein (50 kDa, Protein from Escherichia phage DT57C)
- Baseplate hub protein (107 kDa, Protein from Escherichia phage DT57C)
- L-shaped tail fiber assembly (15 kDa, Protein from Escherichia phage DT57C)
- Escherichia phage dt57c (Virus from Escherichia phage DT57C)
- L-shaped tail fiber assembly (113 kDa, Protein from Escherichia phage DT57C)
Tail tube of DT57C bacteriophage in the full state
Resolution: 4.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 8hrg
Q-score: 0.347
Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M
Nat Commun (2023) 14 pp. 8205-8205 [ DOI: doi:10.1038/s41467-023-43824-9 Pubmed: 38081816 ]
- Tail tube protein (50 kDa, Protein from Escherichia phage DT57C)
- Escherichia phage dt57c (Virus from Escherichia phage DT57C)
Curved tail segment of the DT57C bacteriophage in the full state
Ayala R, Moiseenko AV, Chen TH, Kulikov EE, Golomidova AK, Orekhov PS, Street MA, Sokolova OS, Letarov AV, Wolf M
Nat Commun (2023) 14 pp. 8205-8205 [ DOI: doi:10.1038/s41467-023-43824-9 Pubmed: 38081816 ]
Cryo-EM structure of the marine siphophage vB_DshS-R4C tail tube protein
Resolution: 3.43 Å
EM Method: Helical reconstruction
Fitted PDBs: 8gtb
Q-score: 0.02
Resolution: 10.47 Å
EM Method: Single-particle
Fitted PDBs: 6tui
Q-score: 0.08
Bardy P, Fuzik T, Hrebik D, Pantucek R, Beatty JT, Plevka P
Nat Commun (2020) 11 pp. 3034- [ Pubmed: 32541663 DOI: doi:10.1038/s41467-020-16669-9 ]
- Uncharacterized protein (32 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Adaptor protein rcc01688 (20 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Uncharacterized protein (9 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Capsid (5 MDa, Complex from Rhodobacter capsulatus SB 1003)
- Portal protein rcc01684 (42 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Tail terminator protein rcc01690 (13 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Stopper protein rcc01689 (12 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Rhodobacter capsulatus de442 (8 MDa, Virus)
- Tail tube protein rcc01691 (14 kDa, Protein from Rhodobacter capsulatus SB 1003)
- Connector (760 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Head spike (80 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Tail (730 kDa, Complex from Rhodobacter capsulatus SB 1003)
- Phage major capsid protein, hk97 family (40 kDa, Protein from Rhodobacter capsulatus SB 1003)