Neck of phage 812 after tail contraction (C6)
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 8q01
Q-score: 0.528
Cienikova Z, Novacek J, Siborova M, Popelarova B, Fuzik T, Benesik M, Bardy P, Plevka P
To Be Published
- Zinc ion (65 Da, Ligand)
- Staphylococcus phage 812 (Virus from Staphylococcus phage 812)
- Tail tube protein (15 kDa, Protein from Staphylococcus phage 812)
- Adaptor protein (34 kDa, Protein from Staphylococcus phage 812)
- Tail terminator protein (31 kDa, Protein from Staphylococcus phage 812)
- Tail sheath protein (64 kDa, Protein from Staphylococcus phage 812)
- Capsid protein (33 kDa, Protein from Staphylococcus phage 812)
Mature virion portal of phage lambda with DNA
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8xpm
Q-score: 0.31
J Virol (2024) 98 pp. e0006824-e0006824 [ Pubmed: 38661364 DOI: doi:10.1128/jvi.00068-24 ]
- Portal protein b (59 kDa, Protein from Escherichia phage Lambda)
- Dna (104-mer) (32 kDa, DNA from Escherichia phage Lambda)
- Escherichia phage lambda (Virus from Escherichia phage Lambda)
- Head completion protein (7 kDa, Protein from Escherichia phage Lambda)
- Tail tube protein (25 kDa, Protein from Escherichia phage Lambda)
- Head-tail connector protein fii (12 kDa, Protein from Escherichia phage Lambda)
- Dna (92-mer) (28 kDa, DNA from Escherichia phage Lambda)
- Tail tube terminator protein (14 kDa, Protein from Escherichia phage Lambda)
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 8bcp
Q-score: 0.304
J Virol (2024) pp. e0137624-e0137624 [ DOI: doi:10.1128/jvi.01376-24 Pubmed: 39714170 ]
- Tail tube terminator protein p142 (18 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
Resolution: 4.05 Å
EM Method: Single-particle
Fitted PDBs: 8bcu
Q-score: 0.301
J Virol (2024) pp. e0137624-e0137624 [ DOI: doi:10.1128/jvi.01376-24 Pubmed: 39714170 ]
- Tail tube terminator protein p142 (18 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
Cryo-EM Structure of the P74-26 Tail Tube
Resolution: 2.72 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ed0
Q-score: 0.64
Agnello E, Pajak J, Liu X, Kelch BA
J Biol Chem (2023) 299 pp. 103021-103021 [ Pubmed: 36791911 DOI: doi:10.1016/j.jbc.2023.103021 ]
- Oshimavirus p7426 (Virus from Oshimavirus P7426)
- Tail tube protein gp93 (37 kDa, Protein from Oshimavirus P7426)
Cryo-EM Structure of P74-26 tail-like tubes
Resolution: 2.81 Å
EM Method: Helical reconstruction
Fitted PDBs: 8edx
Q-score: 0.634
Tail tip of siphophage T5 : tip proteins
Resolution: 3.53 Å
EM Method: Single-particle
Fitted PDBs: 7zhj
Q-score: 0.438
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (1 MDa, Virus from Escherichia virus T5)
- Pore-forming tail tip protein pb2 (131 kDa, Protein from Escherichia phage T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : full complex after interaction with its bacterial receptor FhuA
Resolution: 4.29 Å
EM Method: Single-particle
Fitted PDBs: 7zn2
Q-score: 0.32
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Pore-forming tail tip protein pb2 (131 kDa, Protein from Escherichia phage T5)
- Straight fiber protein pb4 (74 kDa, Protein from Escherichia phage T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : full structure
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7zqb
Q-score: 0.357
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- Probable baseplate hub protein (107 kDa, Protein from Escherichia phage T5)
- Pore-forming tail tip protein pb2 (131 kDa, Protein from Escherichia phage T5)
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- Probable central straight fiber (74 kDa, Protein from Escherichia phage T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)
Tail tip of siphophage T5 : common core proteins
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7qg9
Q-score: 0.486
Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C
Sci Adv (2023) 9 pp. eade9674-eade9674 [ Pubmed: 36961893 DOI: doi:10.1126/sciadv.ade9674 ]
- Tail tube protein (50 kDa, Protein from Escherichia phage T5)
- Distal tail protein (22 kDa, Protein from Escherichia phage T5)
- Minor tail protein (34 kDa, Protein from Escherichia phage T5)
- Escherichia virus t5 (Virus from Escherichia virus T5)
- L-shaped tail fiber protein p132 (15 kDa, Protein from Escherichia phage T5)