Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8g9u
Q-score: 0.44
Hu C, Myers MT, Zhou X, Hou Z, Lozen ML, Nam KH, Zhang Y, Ke A
Mol Cell (2024) 84 pp. 463-475.e5 [ Pubmed: 38242128 DOI: doi:10.1016/j.molcel.2023.12.034 ]
- Phosphate ion (94 Da, Ligand)
- Cas3 (84 kDa, Protein from Neisseria lactamica)
- Crispr-associated protein, csd1 family (64 kDa, Protein from Neisseria lactamica)
- Traget strand dna (53-mer) (16 kDa, DNA from Neisseria lactamica)
- Distal nontarget dna (5'-d(p*tp*tp*ap*tp*ap*tp*tp*ap*ap*tp*ap*tp*tp*ap*tp*ap*tp*tp*tp*a)-3') (6 kDa, DNA from Neisseria lactamica)
- Proximal nontarget strand dna (5'-d(p*ap*tp*gp*ap*ap*cp*tp*tp*cp*ap*ap*ap*ap*ap*ap*ap*ap*ap*ap*a)-3') (6 kDa, DNA from Neisseria lactamica)
- Crispr-associated protein, csd2 family (32 kDa, Protein from Neisseria lactamica)
- Ternary complex of cas3 with dsdna bound type i-c cascade at r-loop formation (400 kDa, Complex from Neisseria lactamica)
- Phage associated protein (14 kDa, Protein from Neisseria lactamica)
- Crrna (43-mer) (13 kDa, RNA from Neisseria lactamica)
- Pre-crrna processing endonuclease (23 kDa, Protein from Neisseria lactamica)
- Magnesium ion (24 Da, Ligand)
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 8gaf
Q-score: 0.159
Hu C, Myers MT, Zhou X, Hou Z, Lozen ML, Nam KH, Zhang Y, Ke A
Mol Cell (2024) 84 pp. 463-475.e5 [ Pubmed: 38242128 DOI: doi:10.1016/j.molcel.2023.12.034 ]
- Cas11 (14 kDa, Protein from Neisseria lactamica)
- Cas7 (32 kDa, Protein from Neisseria lactamica)
- Cas5 (23 kDa, Protein from Neisseria lactamica)
- Crrna (43-mer) (13 kDa, RNA from Neisseria lactamica)
- Ternary complex of cas3 with dsdna bound type i-c cascade at r-loop formation (400 kDa, Complex from Neisseria lactamica)
- Cas8 (64 kDa, Protein from Neisseria lactamica)
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8gam
Q-score: 0.16
Hu C, Myers MT, Zhou X, Hou Z, Lozen ML, Nam KH, Zhang Y, Ke A
Mol Cell (2024) 84 pp. 463-475.e5 [ Pubmed: 38242128 DOI: doi:10.1016/j.molcel.2023.12.034 ]
- Cas11 (14 kDa, Protein from Neisseria lactamica)
- Cas7 (32 kDa, Protein from Neisseria lactamica)
- Cas5 (23 kDa, Protein from Neisseria lactamica)
- Non target strand dna (5'-d(p*ap*tp*gp*ap*ap*cp*tp*tp*cp*ap*ap*ap*a)-3') (3 kDa, DNA from Neisseria lactamica)
- Crrna (43-mer) (13 kDa, RNA from Neisseria lactamica)
- Ternary complex of cas3 with dsdna bound type i-c cascade at r-loop formation (400 kDa, Complex from Neisseria lactamica)
- Phage associated protein (64 kDa, Protein from Neisseria lactamica)
- Target strand dna (25-mer) (7 kDa, DNA from Neisseria lactamica)
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8gan
Q-score: 0.227
Hu C, Myers MT, Zhou X, Hou Z, Lozen ML, Nam KH, Zhang Y, Ke A
Mol Cell (2024) 84 pp. 463-475.e5 [ Pubmed: 38242128 DOI: doi:10.1016/j.molcel.2023.12.034 ]
- Cas8 (64 kDa, Protein from Neisseria lactamica)
- Proximal non target strand dna (5'-d(p*ap*tp*gp*ap*ap*cp*tp*tp*cp*ap*ap*ap*ap*ap*ap*ap*ap*ap*a)-3') (5 kDa, DNA from Neisseria lactamica)
- Cas11 (14 kDa, Protein from Neisseria lactamica)
- Cas7 (32 kDa, Protein from Neisseria lactamica)
- Distal non target strand dna (5'-d(p*ap*tp*tp*ap*tp*ap*tp*tp*ap*ap*tp*ap*tp*tp*ap*tp*ap*tp*tp*tp*a)-3') (6 kDa, DNA from Neisseria lactamica)
- Cas5 (23 kDa, Protein from Neisseria lactamica)
- Type i-c cascade at r-loop formation (400 kDa, Complex from Neisseria lactamica)
- Crrna (43-mer) (13 kDa, RNA from Neisseria lactamica)
- Target strand dna (53-mer) (16 kDa, DNA from Neisseria lactamica)