LSU structure derived from the LSU sample of the mitoribosome from T. gondii.
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 9g6k
Q-score: 0.482
Wang C, Kassem S, Rocha REO, Sun P, Nguyen TT, Kloehn J, Liu X, Brusini L, Bonavoglia A, Barua S, Boissier F, Lucia Del Cistia M, Peng H, Tang X, Xie F, Wang Z, Vadas O, Suo X, Hashem Y, Soldati-Favre D, Jia Y
Nat Commun (2024) 15 pp. 10689-10689 [ Pubmed: 39690155 DOI: doi:10.1038/s41467-024-55033-z ]
- Large ribosomal subunit protein ul23m (25 kDa, Protein from Toxoplasma gondii)
- Ulr5 (4 kDa, RNA from Toxoplasma gondii)
- Lsub (9 kDa, RNA from Toxoplasma gondii)
- Ap2 domain transcription factor ap2viib-2 (21 kDa, Protein from Toxoplasma gondii)
- Bl27m (20 kDa, Protein from Toxoplasma gondii)
- Rna10 (28 kDa, RNA from Toxoplasma gondii)
- Fas1 domain-containing protein (37 kDa, Protein from Toxoplasma gondii)
- Ml174 (22 kDa, Protein from Toxoplasma gondii)
- Ribosomal protein l15, putative (36 kDa, Protein from Toxoplasma gondii)
- Rap domain-containing protein (51 kDa, Protein from Toxoplasma gondii)
- Rna35 (8 kDa, RNA from Toxoplasma gondii)
- Ml40 (27 kDa, Protein from Toxoplasma gondii)
- Rna15 (9 kDa, RNA from Toxoplasma gondii)
- Ulr2 (11 kDa, RNA from Toxoplasma gondii)
- Putative ribosomal protein l28 (33 kDa, Protein from Toxoplasma gondii)
- Rna14 (16 kDa, RNA from Toxoplasma gondii)
- Ml175 (8 kDa, Protein from Toxoplasma gondii)
- Rna31 (11 kDa, RNA from Toxoplasma gondii)
- Large ribosomal subunit protein ul4m (54 kDa, Protein from Toxoplasma gondii)
- Ribosomal l22p/l17e protein (41 kDa, Protein from Toxoplasma gondii)
- Ribosomal protein rpl22 (17 kDa, Protein from Toxoplasma gondii)
- Rna23t (14 kDa, RNA from Toxoplasma gondii)
- Ml173 (11 kDa, Protein from Toxoplasma gondii)
- Ml164 (26 kDa, Protein from Toxoplasma gondii)
- Ul1m (6 kDa, Protein from Toxoplasma gondii)
- Rna1 (30 kDa, RNA from Toxoplasma gondii)
- Rna16 (8 kDa, RNA from Toxoplasma gondii)
- Rna36 (10 kDa, RNA from Toxoplasma gondii)
- Hect-domain (ubiquitin-transferase) domain-containing protein (25 kDa, Protein from Toxoplasma gondii)
- Ulr1 (8 kDa, RNA from Toxoplasma gondii)
- Lsud/e (89 kDa, RNA from Toxoplasma gondii)
- Bl19m (43 kDa, Protein from Toxoplasma gondii)
- Putative 50s ribosomal protein l13 (24 kDa, Protein from Toxoplasma gondii)
- Lsua (57 kDa, RNA from Toxoplasma gondii)
- Amp-dependent synthetase/ligase domain-containing protein (92 kDa, Protein from Toxoplasma gondii)
- Ulr9 (17 kDa, RNA from Toxoplasma gondii)
- Large ribosomal subunit protein ml43 (22 kDa, Protein from Toxoplasma gondii)
- Large ribosomal subunit protein ul29m (25 kDa, Protein from Toxoplasma gondii)
- Ml172 (15 kDa, Protein from Toxoplasma gondii)
- Putative 50s ribosomal protein l3 (34 kDa, Protein from Toxoplasma gondii)
- Ml185 (6 kDa, Protein from Toxoplasma gondii)
- Rna2 (20 kDa, RNA from Toxoplasma gondii)
- Ul14m (12 kDa, Protein from Toxoplasma gondii)
- Lsuc (8 kDa, RNA from Toxoplasma gondii)
- Ribosomal protein l46 (32 kDa, Protein from Toxoplasma gondii)
- Bir protein (26 kDa, Protein from Toxoplasma gondii)
- Lsu structure derived from the lsu sample of the mitoribosome from t. gondii. (Complex from Toxoplasma gondii)
- Macro domain-containing protein (57 kDa, Protein from Toxoplasma gondii)
- Rap domain-containing protein (58 kDa, Protein from Toxoplasma gondii)
- Rap domain-containing protein (49 kDa, Protein from Toxoplasma gondii)
- Rap domain-containing protein (43 kDa, Protein from Toxoplasma gondii)
- Ml178 (10 kDa, Protein from Toxoplasma gondii)
- Rna3 (29 kDa, RNA from Toxoplasma gondii)
- Peptidyl-prolyl cis-trans isomerase (26 kDa, Protein from Toxoplasma gondii)
- Lsuf/g (62 kDa, RNA from Toxoplasma gondii)
- Large ribosomal subunit protein ul11m (19 kDa, Protein from Toxoplasma gondii)
- Putative 60s ribosomal protein l27 (8 kDa, Protein from Toxoplasma gondii)
- Ml53 (13 kDa, Protein from Toxoplasma gondii)
- Ml184 (4 kDa, Protein from Toxoplasma gondii)
- Ap2 domain transcription factor ap2iv-1 (19 kDa, Protein from Toxoplasma gondii)
- Large ribosomal subunit protein ml49 (8 kDa, Protein from Toxoplasma gondii)
- Large ribosomal subunit protein ul24c (25 kDa, Protein from Toxoplasma gondii)
- Ssuf (12 kDa, RNA from Toxoplasma gondii)
- Ulr3 (8 kDa, RNA from Toxoplasma gondii)
- Ulr4 (2 kDa, RNA from Toxoplasma gondii)
- Putative 50s ribosomal protein l17 (29 kDa, Protein from Toxoplasma gondii)
- Putative ribosomal protein l20 (14 kDa, Protein from Toxoplasma gondii)
- Rrm domain-containing protein (47 kDa, Protein from Toxoplasma gondii)
- Ml176 (11 kDa, Protein from Toxoplasma gondii)
- Ml183 (3 kDa, Protein from Toxoplasma gondii)
- Ml162 (30 kDa, Protein from Toxoplasma gondii)
- Large ribosomal subunit protein bl21m (47 kDa, Protein from Toxoplasma gondii)
- Ml182 (14 kDa, Protein from Toxoplasma gondii)
- Rna11 (22 kDa, RNA from Toxoplasma gondii)
- Transmembrane protein (4 kDa, Protein from Toxoplasma gondii)
- Rna38 (14 kDa, RNA from Toxoplasma gondii)
- Ulr7,ulr8 (3 kDa, RNA from Toxoplasma gondii)
- Transmembrane protein (31 kDa, Protein from Toxoplasma gondii)
- Lsu ribosomal protein l2p, putative (37 kDa, Protein from Toxoplasma gondii)
- Rna13 (15 kDa, RNA from Toxoplasma gondii)
- Ribosomal protein l9, n-terminal domain-containing protein (9 kDa, Protein from Toxoplasma gondii)
- Putative 50s ribosomal protein l33 (14 kDa, Protein from Toxoplasma gondii)
- Rna32 (5 kDa, RNA from Toxoplasma gondii)
- Rap domain-containing protein (85 kDa, Protein from Toxoplasma gondii)
- Rna37 (19 kDa, RNA from Toxoplasma gondii)
- Bl35m (13 kDa, Protein from Toxoplasma gondii)
- Rap domain-containing protein (49 kDa, Protein from Toxoplasma gondii)
- Large ribosomal subunit protein ul24c (22 kDa, Protein from Toxoplasma gondii)
- Rna6 (18 kDa, RNA from Toxoplasma gondii)
- Rna7 (29 kDa, RNA from Toxoplasma gondii)
- Rap domain-containing protein (67 kDa, Protein from Toxoplasma gondii)
- Duf6832 domain-containing protein (55 kDa, Protein from Toxoplasma gondii)
- Rna29 (16 kDa, RNA from Toxoplasma gondii)
- Ml181 (5 kDa, Protein from Toxoplasma gondii)
- Rap domain-containing protein (83 kDa, Protein from Toxoplasma gondii)
- Ml180 (13 kDa, Protein from Toxoplasma gondii)
- Bl36m (10 kDa, Protein from Toxoplasma gondii)
- Bl32m (9 kDa, Protein from Toxoplasma gondii)
- Ml177 (13 kDa, Protein from Toxoplasma gondii)
- Ribosomal l25 family protein (37 kDa, Protein from Toxoplasma gondii)
- Ml179 (12 kDa, Protein from Toxoplasma gondii)
- Ulr6 (4 kDa, RNA from Toxoplasma gondii)
- Putative 50s ribosomal protein l16 (20 kDa, Protein from Toxoplasma gondii)
- Ml148 (96 kDa, Protein from Toxoplasma gondii)
- Large ribosomal subunit protein ml54 (10 kDa, Protein from Toxoplasma gondii)
Large subunit of the Chlamydomonas reinhardtii mitoribosome
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7pkt
Q-score: 0.486
Waltz F, Salinas-Giege T, Englmeier R, Meichel H, Soufari H, Kuhn L, Pfeffer S, Forster F, Engel BD, Giege P, Drouard L, Hashem Y
Nat Commun (2021) 12 pp. 7176-7176 [ Pubmed: 34887394 DOI: doi:10.1038/s41467-021-27200-z ]
- Ul5m (23 kDa, Protein from Chlamydomonas reinhardtii)
- Bl28m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ul3m (44 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l18e/l15p domain-containing protein (35 kDa, Protein from Chlamydomonas reinhardtii)
- 50s ribosomal protein l20 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml59/64 (14 kDa, Protein from Chlamydomonas reinhardtii)
- L2a rrna (27 kDa, RNA from Chlamydomonas reinhardtii)
- 50s ribosomal protein l9, chloroplastic (30 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Chlamydomonas reinhardtii)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Ml115 (72 kDa, Protein from Chlamydomonas reinhardtii)
- L6 rrna (43 kDa, RNA from Chlamydomonas reinhardtii)
- Kow domain-containing protein,ul24m (31 kDa, Protein from Chlamydomonas reinhardtii)
- Ml87 (23 kDa, Protein from Chlamydomonas reinhardtii)
- L3b rrna (59 kDa, RNA from Chlamydomonas reinhardtii)
- L4 rrna (38 kDa, RNA from Chlamydomonas reinhardtii)
- Unk2 (4 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l13 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17,bl17m (21 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_tl5_c domain-containing protein (38 kDa, Protein from Chlamydomonas reinhardtii)
- Ml43 (16 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Bl36m (3 kDa, Protein from Chlamydomonas reinhardtii)
- Plastid ribosomal protein l6 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Bl21m (40 kDa, Protein from Chlamydomonas reinhardtii)
- Ul22m (39 kDa, Protein from Chlamydomonas reinhardtii)
- Ml117 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l23 (25 kDa, Protein from Chlamydomonas reinhardtii)
- Ml40 (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ml114 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Large subunit of the mitochondrial ribosome of chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- L8 rrna (132 kDa, RNA from Chlamydomonas reinhardtii)
- Ml118 (64 kDa, Protein from Chlamydomonas reinhardtii)
- Unk1 (2 kDa, Protein from Chlamydomonas reinhardtii)
- Ppr* (14 kDa, Protein from Chlamydomonas reinhardtii)
- Bl27m (18 kDa, Protein from Chlamydomonas reinhardtii)
- L3a rrna (5s) (24 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l30 domain-containing protein (24 kDa, Protein from Chlamydomonas reinhardtii)
- Ml41 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Bl32m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml63/57/60 (14 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l33 (6 kDa, Protein from Chlamydomonas reinhardtii)
- Bl35m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ml80 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l2_c domain-containing protein (41 kDa, Protein from Chlamydomonas reinhardtii)
- L1 rrna (51 kDa, RNA from Chlamydomonas reinhardtii)
- Ul14m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml119 (36 kDa, Protein from Chlamydomonas reinhardtii)
- Ml116 (53 kDa, Protein from Chlamydomonas reinhardtii)
- Bl34m (29 kDa, Protein from Chlamydomonas reinhardtii)
- L7 rrna (186 kDa, RNA from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- L5 rrna (47 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l16 domain-containing protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Ul29m (14 kDa, Protein from Chlamydomonas reinhardtii)
- Ml113 (84 kDa, Protein from Chlamydomonas reinhardtii)
- Ul4m (45 kDa, Protein from Chlamydomonas reinhardtii)