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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"uS14" AND resolution:[3 TO 4} AND natural_source_ncbi_code:"9606" AND author_name:"L"

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EMD-44671

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The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex

Release date: Sept. 4, 2024
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9bln

Brito Querido J, Sokabe M, Diaz-Lopez I, Gordiyenko Y, Zuber P, Du Y, Albacete-Albacete L, Ramakrishnan V, Fraser CS

Nat Commun (2024) 15 pp. 6633-6633 [ Pubmed: 39117603 DOI: doi:10.1038/s41467-024-50672-8 ]

Sample:

Small ribosomal subunit protein es17 (15 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es26 (13 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us7 (22 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us19 (17 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es19 (16 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit c (105 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us17 (18 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 1 (12 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es8 (24 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit b (77 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es24 (15 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us2 (32 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es10 (18 kDa, Protein from Homo sapiens)
40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit m (42 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es25 (13 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit g (35 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es30 (6 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es7 (22 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es1 (30 kDa, Protein from Homo sapiens)
Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Homo sapiens)
Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es12 (14 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit k (25 kDa, Protein from Homo sapiens)
Potassium ion (39 Da, Ligand)
Small ribosomal subunit protein us8 (14 kDa, Protein from Homo sapiens)
Rrna (555 kDa, RNA from Homo sapiens)
Small ribosomal subunit protein us12 (15 kDa, Protein from Homo sapiens)
Pdcd4-40s-eif4a-eif3-eif1 complex (2 MDa, Complex from Homo sapiens)
Small ribosomal subunit protein us9 (16 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es21 (9 kDa, Protein from Homo sapiens)
Eukaryotic initiation factor 4a-i (44 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit l (66 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es4, x isoform (29 kDa, Protein from Homo sapiens)
Programmed cell death protein 4 (52 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit e (52 kDa, Protein from Homo sapiens)
Spermidine (145 Da, Ligand)
Small ribosomal subunit protein es32 (3 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us15 (17 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit d (64 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us13 (17 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us14 (6 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit f (37 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us3 (26 kDa, Protein from Homo sapiens)
Magnesium ion (24 Da, Ligand)
Acetic acid (60 Da, Ligand)
Small ribosomal subunit protein es6 (28 kDa, Protein from Homo sapiens)
Zinc ion (65 Da, Ligand)
Small ribosomal subunit protein us5 (31 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es27 (9 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us4 (22 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein es28 (7 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit h (39 kDa, Protein from Homo sapiens)
Small ribosomal subunit protein us10 (13 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit i (36 kDa, Protein from Homo sapiens)
Eukaryotic translation initiation factor 3 subunit a (166 kDa, Protein from Homo sapiens)

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EMD-10760

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Mammalian 48S late-stage initiation complex with beta-globin mRNA

Release date: April 8, 2020
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6yal
Q-score: 0.379

Simonetti A, Guca E, Bochler A, Kuhn L, Hashem Y

Cell Rep (2020) 31 pp. 107497-107497 [ Pubmed: 32268096 DOI: doi:10.1016/j.celrep.2020.03.061 ]

Sample:

40s ribosomal protein es27 (9 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us17 (18 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us4 (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es21 (8 kDa, Protein from Oryctolagus cuniculus)
Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
40s ribosomal protein es26 (12 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es4 (29 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es24 (15 kDa, Protein from Oryctolagus cuniculus)
18s ribosomal rna (601 kDa, RNA from Oryctolagus cuniculus)
40s ribosomal protein es1 (29 kDa, Protein from Oryctolagus cuniculus)
60s ribosomal protein ul41 (3 kDa, Protein from Oryctolagus cuniculus)
Atp-binding cassette sub-family e member 1 (abce1) (66 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us5 (24 kDa, Protein from Oryctolagus cuniculus)
Ls48s ic (Complex from Oryctolagus cuniculus)
40s ribosomal protein us7 (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es30 (14 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
Initiator methionylated trna (24 kDa, RNA from Oryctolagus cuniculus)
40s ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es8 (23 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 2 subunit alpha (32 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es10 (11 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 1a (12 kDa, Protein from Oryctolagus cuniculus)
Beta-globin mrna (13 kDa, RNA from Homo sapiens)
Magnesium ion (24 Da, Ligand)
40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us2 (23 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es6 (27 kDa, Protein from Oryctolagus cuniculus)
Ls48s ic with beta-globin mrna (Complex)
Eukaryotic translation initiation factor 2 subunit gamma (45 kDa, Protein from Oryctolagus cuniculus)
Iron/sulfur cluster (351 Da, Ligand)
40s ribosomal protein us8 (14 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us3 (26 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es12 (14 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es25 (13 kDa, Protein from Oryctolagus cuniculus)
Beta-globin mrna (Complex from Homo sapiens)

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EMD-10761

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Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA

Release date: April 8, 2020
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6yam
Q-score: 0.257

Simonetti A, Guca E, Bochler A, Kuhn L, Hashem Y

Cell Rep (2020) 31 pp. 107497-107497 [ Pubmed: 32268096 DOI: doi:10.1016/j.celrep.2020.03.061 ]

Sample:

40s ribosomal protein es27 (9 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us17 (18 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es30 (6 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 2 subunit gamma (45 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us2 (23 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us4 (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es21 (8 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit l (66 kDa, Protein from Oryctolagus cuniculus)
Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
40s ribosomal protein es26 (12 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es4 (29 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es24 (15 kDa, Protein from Oryctolagus cuniculus)
18s ribosomal rna (601 kDa, RNA from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit a (163 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit d (64 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es1 (29 kDa, Protein from Oryctolagus cuniculus)
Atp-binding cassette sub-family e member 1 (abce1) (66 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us5 (24 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit m (42 kDa, Protein from Oryctolagus cuniculus)
Initiator methionylated trna (24 kDa, RNA from Oryctolagus cuniculus)
40s ribosomal protein us3 (25 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit h (39 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit k (25 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us7 (21 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es8 (23 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit c (105 kDa, Protein from Oryctolagus cuniculus)
Beta-globin mrna (14 kDa, RNA from Homo sapiens)
40s ribosomal protein es10 (11 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es19 (16 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 2 subunit alpha (30 kDa, Protein from Oryctolagus cuniculus)
Ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 1a (16 kDa, Protein from Oryctolagus cuniculus)
Magnesium ion (24 Da, Ligand)
60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit f (30 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es6 (27 kDa, Protein from Oryctolagus cuniculus)
Ls48s+eif3 ic (Complex from Oryctolagus cuniculus)
Ls48s+eif3 ic with beta-globin mrna (Complex)
Iron/sulfur cluster (351 Da, Ligand)
40s ribosomal protein us8 (14 kDa, Protein from Oryctolagus cuniculus)
Eukaryotic translation initiation factor 3 subunit e (52 kDa, Protein from Oryctolagus cuniculus)
40s ribosomal protein es12 (14 kDa, Protein from Oryctolagus cuniculus)
Beta-globin mrna (Complex from Homo sapiens)

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: