Leishmania Major mitochondrial ribosome
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ane
Q-score: 0.321
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ Pubmed: 33168716 DOI: doi:10.1073/pnas.2011301117 ]
- Ml75 (39 kDa, Protein from Leishmania major)
- Us19m (19 kDa, Protein from Leishmania major)
- Ms51 (94 kDa, Protein from Leishmania major)
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Leishmania major)
- Ms69 (16 kDa, Protein from Leishmania major)
- Bl33m (13 kDa, Protein from Leishmania major)
- Ml79 (33 kDa, Protein from Leishmania major)
- Bs21m (22 kDa, Protein from Leishmania major)
- Leishmania major mitochondrial riobosome (Complex from Leishmania major)
- Ms22 (73 kDa, Protein from Leishmania major)
- Lim zinc-binding domain-containing protein (25 kDa, Protein from Leishmania major)
- Us3m (10 kDa, Protein from Leishmania major)
- Ul24m (53 kDa, Protein from Leishmania major)
- Ms47 (131 kDa, Protein from Leishmania major)
- Large ribosomal rna (6 MDa, RNA from Leishmania major)
- Ms52 (75 kDa, Protein from Leishmania major)
- Ml84 (24 kDa, Protein from Leishmania major)
- Ml85 (27 kDa, Protein from Leishmania major)
- Ms62 (27 kDa, Protein from Leishmania major)
- Excreted/secreted protein 15 (92 kDa, Protein from Leishmania major)
- Ubiquitin-like domain-containing protein (27 kDa, Protein from Leishmania major)
- Ud (8 kDa, Protein from Leishmania major)
- Ml94 (17 kDa, Protein from Leishmania major)
- Putative 50s ribosomal protein l17 (35 kDa, Protein from Leishmania major)
- C2h2-type domain-containing protein (20 kDa, Protein from Leishmania major)
- Ml70 (50 kDa, Protein from Leishmania major)
- Ms35 (99 kDa, Protein from Leishmania major)
- Putative ribosomal protein l2 (43 kDa, Protein from Leishmania major)
- Ml52 (29 kDa, Protein from Leishmania major)
- Ms66 (44 kDa, Protein from Leishmania major)
- Ms33 (20 kDa, Protein from Leishmania major)
- Ml42 (22 kDa, Protein from Leishmania major)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Us15m (50 kDa, Protein from Leishmania major)
- Ms23 (36 kDa, Protein from Leishmania major)
- Bs18m (37 kDa, Protein from Leishmania major)
- Ml88 (22 kDa, Protein from Leishmania major)
- Ml93 (18 kDa, Protein from Leishmania major)
- Bl27m (21 kDa, Protein from Leishmania major)
- Ms71 (19 kDa, Protein from Leishmania major)
- 30s ribosomal protein s17-like protein (36 kDa, Protein from Leishmania major)
- Ms72 (19 kDa, Protein from Leishmania major)
- Ms37 (24 kDa, Protein from Leishmania major)
- Bl28m (27 kDa, Protein from Leishmania major)
- Ml49 (26 kDa, Protein from Leishmania major)
- Ml80 (27 kDa, Protein from Leishmania major)
- Ribosomal_l16 domain-containing protein (18 kDa, Protein from Leishmania major)
- Ml41 (22 kDa, Protein from Leishmania major)
- Ml98 (13 kDa, Protein from Leishmania major)
- Ml72 (56 kDa, Protein from Leishmania major)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Leishmania major)
- Ms29 (54 kDa, Protein from Leishmania major)
- Bs6m (18 kDa, Protein from Leishmania major)
- Magnesium ion (24 Da, Ligand)
- Ml89 (21 kDa, Protein from Leishmania major)
- Ml63 (18 kDa, Protein from Leishmania major)
- Ul30m (45 kDa, Protein from Leishmania major)
- Ul22m (32 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Leishmania major)
- Us8m (35 kDa, Protein from Leishmania major)
- Protein fyv4, mitochondrial (22 kDa, Protein from Leishmania major)
- Ml69 (54 kDa, Protein from Leishmania major)
- Ml87 (22 kDa, Protein from Leishmania major)
- Ms58 (36 kDa, Protein from Leishmania major)
- Ms53 (72 kDa, Protein from Leishmania major)
- Ms48 (199 kDa, Protein from Leishmania major)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Leishmania major)
- Ml82 (37 kDa, Protein from Leishmania major)
- Mrp-l46 domain-containing protein (33 kDa, Protein from Leishmania major)
- Ml38 (57 kDa, Protein from Leishmania major)
- Akap7_nls domain-containing protein (31 kDa, Protein from Leishmania major)
- Ml100 (146 kDa, Protein from Leishmania major)
- Ul29m (54 kDa, Protein from Leishmania major)
- Ml86 (21 kDa, Protein from Leishmania major)
- Ml97 (12 kDa, Protein from Leishmania major)
- Ms65 (30 kDa, Protein from Leishmania major)
- Bl31m (21 kDa, Protein from Leishmania major)
- Rhodanese domain-containing protein (30 kDa, Protein from Leishmania major)
- Ua (17 kDa, Protein from Leishmania major)
- Ml96 (16 kDa, Protein from Leishmania major)
- Ms50 (139 kDa, Protein from Leishmania major)
- Ms60 (35 kDa, Protein from Leishmania major)
- Ml73 (36 kDa, Protein from Leishmania major)
- Us14m (19 kDa, Protein from Leishmania major)
- 50s ribosomal protein l13-like protein (20 kDa, Protein from Leishmania major)
- Putative ribosomal protein l14 (21 kDa, Protein from Leishmania major)
- Uc (12 kDa, Protein from Leishmania major)
- Bs16m (22 kDa, Protein from Leishmania major)
- Ms26 (49 kDa, Protein from Leishmania major)
- Ml68 (65 kDa, Protein from Leishmania major)
- Bl21m (20 kDa, Protein from Leishmania major)
- Ml76 (38 kDa, Protein from Leishmania major)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Leishmania major)
- Ms70 (21 kDa, Protein from Leishmania major)
- Ribosomal protein l3-like protein (53 kDa, Protein from Leishmania major)
- Ms56 (43 kDa, Protein from Leishmania major)
- Bl20m (22 kDa, Protein from Leishmania major)
- Us9m (39 kDa, Protein from Leishmania major)
- Ms55 (65 kDa, Protein from Leishmania major)
- Bl32m (9 kDa, Protein from Leishmania major)
- Ms34 (29 kDa, Protein from Leishmania major)
- Ul4m (49 kDa, Protein from Leishmania major)
- Ms73 (11 kDa, Protein from Leishmania major)
- Ms63 (33 kDa, Protein from Leishmania major)
- Us10m (92 kDa, Protein from Leishmania major)
- Ml40 (33 kDa, Protein from Leishmania major)
- Zinc ion (65 Da, Ligand)
- Ml59/64 (28 kDa, Protein from Leishmania major)
- Ms61 (33 kDa, Protein from Leishmania major)
- Ul10m (22 kDa, Protein from Leishmania major)
- Putative ribosomal protein l11 (40 kDa, Protein from Leishmania major)
- Bl35m (18 kDa, Protein from Leishmania major)
- Bl19m (16 kDa, Protein from Leishmania major)
- Us11m (40 kDa, Protein from Leishmania major)
- Ms43 (51 kDa, Protein from Leishmania major)
- Ml74 (39 kDa, Protein from Leishmania major)
- Ms59 (35 kDa, Protein from Leishmania major)
- Ms57 (45 kDa, Protein from Leishmania major)
- Bl36m (21 kDa, Protein from Leishmania major)
- Ml53 (35 kDa, Protein from Leishmania major)
- Ub (5 kDa, Protein from Leishmania major)
- Ms49 (133 kDa, Protein from Leishmania major)
- Ul23m (28 kDa, Protein from Leishmania major)
- Peptidyl-prolyl cis-trans isomerase (28 kDa, Protein from Leishmania major)
- Putative superoxide dismutase (30 kDa, Protein from Leishmania major)
- Ml99 (13 kDa, Protein from Leishmania major)
- Ml95 (18 kDa, Protein from Leishmania major)
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7aor
Q-score: 0.416
Soufari H, Waltz F, Parrot C, Durrieu-Gaillard S, Bochler A, Kuhn L, Sissler M, Hashem Y
PNAS (2020) 117 pp. 29851-29861 [ Pubmed: 33168716 DOI: doi:10.1073/pnas.2011301117 ]
- Ms62 (31 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms54 (77 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms65 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms48 (206 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Murf5 (10 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex)
- Ms37 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Protein fyv4, mitochondrial (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms26 (51 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us14m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms22 (73 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ribosome protein s12 (9 kDa, Protein from Trypanosoma cruzi)
- Zinc ion (65 Da, Ligand)
- Ms68 (27 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms66 (29 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Akap7_nls domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms52 (81 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- 30s ribosomal protein s17-like protein (35 kDa, Protein from Trypanosoma cruzi)
- Rhodanese domain-containing protein (30 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms38 (26 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms23 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms70 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Superoxide dismutase, putative (38 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms53 (76 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs18m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms33 (20 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us15m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Uridine 5'-triphosphate (484 Da, Ligand)
- Us10m (94 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi (strain CL Brener))
- Mt-ssu from trypanosoma cruzi in complex with mt-if-3. (Complex from Trypanosoma cruzi)
- Ms57 (46 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms71 (25 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms55 (67 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms72 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms73 (24 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ribosomal_s5_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us19 (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs21m (23 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms69 (21 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms60 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs6m (19 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms51 (95 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms50 (129 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms35 (99 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us8m (33 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us9m (50 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms49 (136 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms47 (134 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms29 (57 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Magnesium ion (24 Da, Ligand)
- Ms61 (32 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Rna (478-mer) (2 MDa, RNA from Trypanosoma cruzi (strain CL Brener))
- Ms56 (47 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Bs16m (22 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms58 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Us11m (37 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms63 (34 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Ms59 (35 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Sod_fe_c domain-containing protein (49 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Trafficking protein particle complex subunit (28 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
- Mt-if3 (42 kDa, Protein from Trypanosoma cruzi (strain CL Brener))
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7a01
Q-score: 0.37
Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT
Cell Rep (2020) 33 pp. 108476-108476 [ DOI: doi:10.1016/j.celrep.2020.108476 Pubmed: 33296660 ]
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- Halastavi arva rna virus (Complex from Halastavi arva RNA virus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- S5 drbm domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- Complex between 80s ribosome and halv igr ires (Complex from Oryctolagus cuniculus)
- Ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (22 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (8 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein us19 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27a (21 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (5 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (580 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l22 (11 kDa, Protein from Oryctolagus cuniculus)
- Complex between 80s ribosome and halv igr ires (Complex)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el40 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l6e_n domain-containing protein (4 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (27 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l30 (10 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- El34 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Internal ribosome entry site (48 kDa, RNA from Halastavi arva RNA virus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s4,40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (14 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 6zvk
Q-score: 0.421
Abaeva IS, Vicens Q, Bochler A, Soufari H, Simonetti A, Pestova TV, Hashem Y, Hellen CUT
Cell Rep (2020) 33 pp. 108476-108476 [ DOI: doi:10.1016/j.celrep.2020.108476 Pubmed: 33296660 ]
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul2 (26 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (17 kDa, Protein from Oryctolagus cuniculus)
- S5 drbm domain-containing protein (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el19 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (19 kDa, Protein from Oryctolagus cuniculus)
- Ul22 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l26 (15 kDa, Protein from Oryctolagus cuniculus)
- El33 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s_sa_c domain-containing protein (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l14 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s3a (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (22 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ul3 (45 kDa, Protein from Oryctolagus cuniculus)
- El14 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (8 kDa, Protein from Oryctolagus cuniculus)
- Ul15 (16 kDa, Protein from Oryctolagus cuniculus)
- Complex between 870s ribosome and halv igr ires (Complex)
- 60s ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us19 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- El32 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (14 kDa, Protein from Oryctolagus cuniculus)
- El42 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul23 (13 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el28 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- El21 (18 kDa, Protein from Oryctolagus cuniculus)
- El31 (12 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el38 (8 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- Uncharacterized protein (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (10 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- S10_plectin domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (5 kDa, Protein from Oryctolagus cuniculus)
- Ul4 (41 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el39 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l22 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (7 kDa, Protein from Oryctolagus cuniculus)
- 5s ribosomal rna (38 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- 28s ribosomal rna (1 MDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein ul6 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- Halv igr ires (Complex from Halastavi arva RNA virus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el40 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l6e_n domain-containing protein (4 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul13 (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l10 (predicted) (11 kDa, Protein from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein el20 (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el18 (21 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein el8 (27 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein el43 (10 kDa, Protein from Oryctolagus cuniculus)
- Ribosome (Complex from Oryctolagus cuniculus)
- 60s acidic ribosomal protein p0 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l30 (10 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s23 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- El34 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (24 kDa, Protein from Oryctolagus cuniculus)
- Internal ribosome entry site (48 kDa, RNA from Halastavi arva RNA virus)
- Ul29 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l5 (34 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (602 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- 5.8s ribosomal rna (50 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)
Mammalian 48S late-stage initiation complex with beta-globin mRNA
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6yal
Q-score: 0.379
Simonetti A, Guca E, Bochler A, Kuhn L, Hashem Y
Cell Rep (2020) 31 pp. 107497-107497 [ Pubmed: 32268096 DOI: doi:10.1016/j.celrep.2020.03.061 ]
- 40s ribosomal protein us17 (18 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us7 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us2 (23 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es1 (29 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es10 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es4 (29 kDa, Protein from Oryctolagus cuniculus)
- Ls48s ic (Complex from Oryctolagus cuniculus)
- 40s ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- Ls48s ic with beta-globin mrna (Complex)
- 40s ribosomal protein es27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us5 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us4 (21 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit alpha (32 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (601 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es24 (15 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit gamma (45 kDa, Protein from Oryctolagus cuniculus)
- Beta-globin mrna (13 kDa, RNA from Homo sapiens)
- 40s ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us8 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es8 (23 kDa, Protein from Oryctolagus cuniculus)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 40s ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Initiator methionylated trna (24 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es6 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us3 (26 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es12 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (14 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Atp-binding cassette sub-family e member 1 (abce1) (66 kDa, Protein from Oryctolagus cuniculus)
- Iron/sulfur cluster (351 Da, Ligand)
- Eukaryotic translation initiation factor 1a (12 kDa, Protein from Oryctolagus cuniculus)
- Beta-globin mrna (Complex from Homo sapiens)
- 40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es25 (13 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein ul41 (3 kDa, Protein from Oryctolagus cuniculus)
Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6yam
Q-score: 0.257
Simonetti A, Guca E, Bochler A, Kuhn L, Hashem Y
Cell Rep (2020) 31 pp. 107497-107497 [ Pubmed: 32268096 DOI: doi:10.1016/j.celrep.2020.03.061 ]
- 40s ribosomal protein us17 (18 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit alpha (30 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit l (66 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit k (25 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (12 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es1 (29 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es10 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us19 (17 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit c (105 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit h (39 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit m (42 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es4 (29 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us7 (21 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit f (30 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es19 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us3 (25 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es17 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es21 (8 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us5 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us4 (21 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (16 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (601 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es24 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us8 (14 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit d (64 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es8 (23 kDa, Protein from Oryctolagus cuniculus)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 3 subunit e (52 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ls48s+eif3 ic (Complex from Oryctolagus cuniculus)
- Initiator methionylated trna (24 kDa, RNA from Oryctolagus cuniculus)
- 40s ribosomal protein es6 (27 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us13 (17 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es12 (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us2 (23 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit gamma (45 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- Atp-binding cassette sub-family e member 1 (abce1) (66 kDa, Protein from Oryctolagus cuniculus)
- Iron/sulfur cluster (351 Da, Ligand)
- Ls48s+eif3 ic with beta-globin mrna (Complex)
- Beta-globin mrna (Complex from Homo sapiens)
- 40s ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us10 (13 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 1a (16 kDa, Protein from Oryctolagus cuniculus)
- Beta-globin mrna (14 kDa, RNA from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit a (163 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 6yan
Q-score: 0.351
Simonetti A, Guca E, Bochler A, Kuhn L, Hashem Y
Cell Rep (2020) 31 pp. 107497-107497 [ Pubmed: 32268096 DOI: doi:10.1016/j.celrep.2020.03.061 ]
- 40s ribosomal protein s24 (14 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s11 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es28 (7 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us12 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es26 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es30 (6 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s12 (13 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein es10 (11 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s27 (9 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us11 (14 kDa, Protein from Oryctolagus cuniculus)
- Ls48s ic (Complex from Oryctolagus cuniculus)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15a (14 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein sa (23 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s3 (25 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us5 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s9 (predicted) (21 kDa, Protein from Oryctolagus cuniculus)
- 18s ribosomal rna (601 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein es17 (14 kDa, Protein from Oryctolagus cuniculus)
- Histone 4 mrna (Complex from Mus musculus)
- 40s ribosomal protein es19 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s21 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es25 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es7 (21 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s5 (21 kDa, Protein from Oryctolagus cuniculus)
- Initiator methionylated trna (24 kDa, RNA from Oryctolagus cuniculus)
- Histone 4 (h4) mrna (11 kDa, RNA from Mus musculus)
- Ribosomal protein us9 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_s10 domain-containing protein (11 kDa, Protein from Oryctolagus cuniculus)
- Eukaryotic translation initiation factor 2 subunit gamma (45 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us15 (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es31 (8 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein s15 (15 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein us13 (16 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s4 (29 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s8 (23 kDa, Protein from Oryctolagus cuniculus)
- Ls48s ic with histone 4 mrna (Complex)
- Eukaryotic translation initiation factor 2 subunit 1 (30 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein rack1 (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein us14 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein es1 (24 kDa, Protein from Oryctolagus cuniculus)
- 40s ribosomal protein s6 (27 kDa, Protein from Oryctolagus cuniculus)