28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8oip
Q-score: 0.418
Saurer M, Leibundgut M, Nadimpalli HP, Scaiola A, Schonhut T, Lee RG, Siira SJ, Rackham O, Dreos R, Lenarcic T, Kummer E, Gatfield D, Filipovska A, Ban N
Science (2023) 380 pp. 531-536 [ Pubmed: 37141370 DOI: doi:10.1126/science.adf9890 ]
- Mitochondrial ribosomal protein s22 (43 kDa, Protein from Sus scrofa)
- Mrna (2 kDa, RNA from Homo sapiens)
- 12s rrna (309 kDa, RNA from Sus scrofa)
- Mitochondrial ribosomal protein s10 (23 kDa, Protein from Sus scrofa)
- Bl31m (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s33 (16 kDa, Protein from Sus scrofa)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Fe-s-o hybrid cluster (335 Da, Ligand)
- Mitochondrial ribosomal protein s26 (23 kDa, Protein from Sus scrofa)
- Coiled-coil-helix-coiled-coil-helix domain containing 1 (13 kDa, Protein from Sus scrofa)
- Death associated protein 3 (46 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l19, mitochondrial (34 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s5, mitochondrial isoform x2 (48 kDa, Protein from Sus scrofa)
- Spermidine (145 Da, Ligand)
- Mitochondrial ribosomal protein s18c (16 kDa, Protein from Sus scrofa)
- Potassium ion (39 Da, Ligand)
- Mitochondrial ribosomal protein s7 (28 kDa, Protein from Sus scrofa)
- 28s mammalian mitochondrial small ribosomal subunit with mtrf1, mrna, and p-site trna (1 MDa, Complex from Sus scrofa)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Sus scrofa)
- Mitoribosomal protein ms28, mrps28 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s2 (31 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s34 (55 kDa, Protein from Sus scrofa)
- Water (18 Da, Ligand)
- P-site met-trna(fmet) (22 kDa, RNA from Homo sapiens)
- Peptide chain release factor 1, mitochondrial (55 kDa, Protein from Homo sapiens)
- Spermine (202 Da, Ligand)
- Mitochondrial ribosomal protein s11 (20 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s14 (15 kDa, Protein from Sus scrofa)
- Us9m (45 kDa, Protein from Sus scrofa)
- Bs6m,mitochondrial ribosomal protein s6 (41 kDa, Protein from Sus scrofa)
- Ms39 (78 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s25 (19 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s24 (18 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s12 (15 kDa, Protein from Sus scrofa)
- Ms23 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s27 (45 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s31, mitochondrial (43 kDa, Protein from Sus scrofa)
- Zinc ion (65 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 28s ribosomal protein s35, mitochondrial isoform 1 (41 kDa, Protein from Sus scrofa)
- Us17m (14 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Aurora kinase a interacting protein 1 (22 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Sus scrofa)