Architecture of the spinach plastid-encoded RNA polymerase
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 8xzv
Q-score: 0.444
Wang T, Wang GL, Fang Y, Zhang Y, Peng W, Zhou Y, Zhang A, Yu LJ, Lu C
Nat Commun (2024) 15 pp. 9838-9838 [ Pubmed: 39537621 DOI: doi:10.1038/s41467-024-54266-2 ]
- Superoxide dismutase (31 kDa, Protein from Spinacia oleracea)
- Ptac18 (17 kDa, Protein from Spinacia oleracea)
- Protein plastid transcriptionally active 14 isoform x2 (56 kDa, Protein from Spinacia oleracea)
- Ptac3 (101 kDa, Protein from Spinacia oleracea)
- Superoxide dismutase (31 kDa, Protein from Spinacia oleracea)
- Protein plastid transcriptionally active 7 (19 kDa, Protein from Spinacia oleracea)
- Protein plastid transcriptionally active 10 (80 kDa, Protein from Spinacia oleracea)
- Dna-directed rna polymerase subunit beta (121 kDa, Protein from Spinacia oleracea)
- Dna-directed rna polymerase subunit beta'' (154 kDa, Protein from Spinacia oleracea)
- Dna-directed rna polymerase subunit beta' (78 kDa, Protein from Spinacia oleracea)
- Protein plastid transcriptionally active 12 (59 kDa, Protein from Spinacia oleracea)
- Mure (85 kDa, Protein from Spinacia oleracea)
- Dna-directed rna polymerase subunit alpha (38 kDa, Protein from Spinacia oleracea)
- Spinach plastid-encoded rna polymerase (960 kDa, Complex from Spinacia oleracea)
- Fe (iii) ion (55 Da, Ligand)
- Thioredoxin-like protein citrx, chloroplastic (20 kDa, Protein from Spinacia oleracea)
- Ptac6 (37 kDa, Protein from Spinacia oleracea)
- Fructokinase-like 2, chloroplastic isoform x2 (65 kDa, Protein from Spinacia oleracea)
- Fructokinase-like 1, chloroplastic (53 kDa, Protein from Spinacia oleracea)
Cryo-EM structure of human type I OSM receptor complex: model for full extracellular assembly
Resolution: 3.99 Å
EM Method: Single-particle
Fitted PDBs: 8v29
Q-score: 0.219
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Human osm in complex with gp130 and lifr (Complex)
- Leukemia inhibitory factor receptor (92 kDa, Protein from Homo sapiens)
- Oncostatin-m (22 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of human type I OSM receptor complex: model for assembly core region
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 8v2a
Q-score: 0.438
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Leukemia inhibitory factor receptor (92 kDa, Protein from Homo sapiens)
- Human osm (Complex from Homo sapiens)
- Gp130 and lifr (Complex from Homo sapiens)
- Oncostatin-m (22 kDa, Protein from Homo sapiens)
- Human osm in complex with gp130 and lifr (Complex)
Cryo-EM structure of mouse type II OSM receptor complex: model for full extracellular assembly
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 8v2b
Q-score: 0.31
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- Mouse osm in complex with gp130 and osmr (Complex)
- Interleukin-6 receptor subunit beta (70 kDa, Protein from Mus musculus)
- Oncostatin-m-specific receptor subunit beta (82 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Oncostatin-m (20 kDa, Protein from Mus musculus)
Cryo-EM structure of mouse type II OSM receptor complex: model for assembly core region
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8v2c
Q-score: 0.479
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- Mouse osm in complex with gp130 and osmr (Complex)
- Interleukin-6 receptor subunit beta (70 kDa, Protein from Mus musculus)
- Oncostatin-m-specific receptor subunit beta (82 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Oncostatin-m (20 kDa, Protein from Mus musculus)
Structure of HCoV-HKU1A spike in the functionally anchored-3up conformation with 3TMPRSS2
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 8y7x
Q-score: 0.331
Wang H, Liu X, Zhang X, Zhao Z, Lu Y, Pu D, Zhang Z, Chen J, Wang Y, Li M, Dong X, Duan Y, He Y, Mao Q, Guo H, Sun H, Zhou Y, Yang Q, Gao Y, Yang X, Cao H, Guddat L, Sun L, Rao Z, Yang H
Cell (2024) 187 pp. 4261- [ DOI: doi:10.1016/j.cell.2024.06.016 Pubmed: 38964329 ]
- Transmembrane protease serine 2 (42 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Human coronavirus HKU1 (isolate N1))
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hku1a-tmprss2 complex (Complex from Human coronavirus HKU1)
Local structure of HCoV-HKU1A spike in complex with TMPRSS2 and glycan
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 8y7y
Q-score: 0.577
Wang H, Liu X, Zhang X, Zhao Z, Lu Y, Pu D, Zhang Z, Chen J, Wang Y, Li M, Dong X, Duan Y, He Y, Mao Q, Guo H, Sun H, Zhou Y, Yang Q, Gao Y, Yang X, Cao H, Guddat L, Sun L, Rao Z, Yang H
Cell (2024) 187 pp. 4261- [ DOI: doi:10.1016/j.cell.2024.06.016 Pubmed: 38964329 ]
- Hku1a-tmprss2 complex (Complex from Human coronavirus HKU1)
- Transmembrane protease serine 2 (42 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Human coronavirus HKU1 (isolate N1))
- Methyl 9-o-acetyl-5-acetamido-3,5-dideoxy-d-glycero-alpha-d-galacto-non-2-ulopyranosidonic acid (365 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of HCoV-HKU1C spike in the functionally anchored-1up conformation with 1TMPRSS2
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8y87
Q-score: 0.355
Wang H, Liu X, Zhang X, Zhao Z, Lu Y, Pu D, Zhang Z, Chen J, Wang Y, Li M, Dong X, Duan Y, He Y, Mao Q, Guo H, Sun H, Zhou Y, Yang Q, Gao Y, Yang X, Cao H, Guddat L, Sun L, Rao Z, Yang H
Cell (2024) 187 pp. 4261- [ DOI: doi:10.1016/j.cell.2024.06.016 Pubmed: 38964329 ]
- Transmembrane protease serine 2 (42 kDa, Protein from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Human coronavirus HKU1 (isolate N5))
- Hku1b-tmprss2 complex (Complex from Human coronavirus HKU1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of HCoV-HKU1C spike in the functionally anchored-2up conformation with 2TMPRSS2
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 8y88
Q-score: 0.37
Wang H, Liu X, Zhang X, Zhao Z, Lu Y, Pu D, Zhang Z, Chen J, Wang Y, Li M, Dong X, Duan Y, He Y, Mao Q, Guo H, Sun H, Zhou Y, Yang Q, Gao Y, Yang X, Cao H, Guddat L, Sun L, Rao Z, Yang H
Cell (2024) 187 pp. 4261- [ DOI: doi:10.1016/j.cell.2024.06.016 Pubmed: 38964329 ]
- Transmembrane protease serine 2 (42 kDa, Protein from Homo sapiens)
- Spike glycoprotein (140 kDa, Protein from Human coronavirus HKU1)
- Hku1a-tmprss2 complex (Complex from Human coronavirus HKU1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of HCoV-HKU1C spike in the functionally anchored-3up conformation with 2TMPRSS2
Resolution: 3.32 Å
EM Method: Single-particle
Fitted PDBs: 8y89
Q-score: 0.296
Wang H, Liu X, Zhang X, Zhao Z, Lu Y, Pu D, Zhang Z, Chen J, Wang Y, Li M, Dong X, Duan Y, He Y, Mao Q, Guo H, Sun H, Zhou Y, Yang Q, Gao Y, Yang X, Cao H, Guddat L, Sun L, Rao Z, Yang H
Cell (2024) 187 pp. 4261- [ DOI: doi:10.1016/j.cell.2024.06.016 Pubmed: 38964329 ]
- Hku1c-tmprss2 complex (Complex from Human coronavirus HKU1)
- Transmembrane protease serine 2 (42 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (140 kDa, Protein from Human coronavirus HKU1)