Structure of PfNT1(Y190A)-GFP in complex with GSK4
Resolution: 4.04 Å
EM Method: Single-particle
Fitted PDBs: 7ydq
Q-score: 0.31
The NuA4 histone acetyltransferase complex from S. cerevisiae
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7yfp
Q-score: 0.334
Ji L, Zhao L, Xu K, Gao H, Zhou Y, Kornberg RD, Zhang H
PNAS (2022) 119 pp. e2214313119-e2214313119 [ Pubmed: 36417436 DOI: doi:10.1073/pnas.2214313119 ]
- Transcription-associated protein 1 (433 kDa, Protein from Saccharomyces cerevisiae)
- Swr1-complex protein 4 (55 kDa, Protein from Saccharomyces cerevisiae)
- Actin (41 kDa, Protein from Saccharomyces cerevisiae)
- Enhancer of polycomb-like protein 1 (96 kDa, Protein from Saccharomyces cerevisiae)
- Arp4 isoform 1 (54 kDa, Protein from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Chromatin modification-related protein eaf1 (112 kDa, Protein from Saccharomyces cerevisiae)
- The nua4 histone acetyltransferase complex (Complex from Saccharomyces cerevisiae)
CryoEM structure of VRC01-CH848.0526.25
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8sav
Q-score: 0.412
Henderson R, Zhou Y, Stalls V, Wiehe K, Saunders KO, Wagh K, Anasti K, Barr M, Parks R, Alam SM, Korber B, Haynes BF, Bartesaghi A, Acharya P
Nat Commun (2023) 14 pp. 2782-2782 [ Pubmed: 37188681 DOI: doi:10.1038/s41467-023-38108-1 ]
- Vrc01 variable heavy chain (13 kDa, Protein from Homo sapiens)
- Vrc01-ch848.0526.25 (Complex from Homo sapiens)
- Ch848.0526.25 gp41 (17 kDa, Protein from HIV-1 06TG.HT008)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Vrc01 variable light chain (11 kDa, Protein from Homo sapiens)
- Ch848.0526.25 gp120 (54 kDa, Protein from HIV-1 06TG.HT008)
Cryo-EM map of human IL-27 signaling complex with full extracellular domains
Zhou Y, Stevis PE, Cao J, Saotome K, Wu J, Glatman Zaretsky A, Haxhinasto S, Yancopoulos GD, Murphy AJ, Sleeman MW, Olson WC, Franklin MC
Sci Adv (2023) 9 pp. eade4395-eade4395 [ Pubmed: 36930708 DOI: doi:10.1126/sciadv.ade4395 ]
- Interleukin-27 receptor subunit alpha (55 kDa, Protein from Homo sapiens)
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Interleukin-27 subunit alpha (27 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Interleukin-27 subunit beta (23 kDa, Protein from Homo sapiens)
- Human il-27 in complex with il-27r alpha and gp130 (Complex from Homo sapiens)
Structure of 2:2 PAPP-A.STC2 complex
Resolution: 4.16 Å
EM Method: Single-particle
Fitted PDBs: 8hgh
Q-score: 0.295
Zhong Q, Chu H, Wang G, Zhang C, Li R, Guo F, Meng X, Lei X, Zhou Y, Ren R, Tao L, Li N, Gao N, Wei Y, Qiao J, Hang J
Cell Discov (2022) 8 pp. 137-137 [ Pubmed: 36550107 DOI: doi:10.1038/s41421-022-00502-2 ]
- Maltose/maltodextrin-binding periplasmic protein,pappalysin-1 (216 kDa, Protein from Homo sapiens)
- Stanniocalcin-2 (33 kDa, Protein from Homo sapiens)
- Structure of 2:2 papp-a/stc2 complex (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of inactive mGlu3 bound to LY341495
Resolution: 4.17 Å
EM Method: Single-particle
Fitted PDBs: 7wi8
Q-score: 0.394
Fang W, Yang F, Xu C, Ling S, Lin L, Zhou Y, Sun W, Wang X, Liu P, Rondard P, Shi P, Pin JP, Tian C, Liu J
Cell Res (2022) 32 pp. 695-698 [ DOI: doi:10.1038/s41422-022-00623-z Pubmed: 35236939 ]
- Metabotropic glutamate receptor 3 (100 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 2-[(1s,2s)-2-carboxycyclopropyl]-3-(9h-xanthen-9-yl)-d-alanine (353 Da, Ligand)
- Cryo-em structure of mglu3 bound with ly2794193 (Complex from Homo sapiens)
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu4
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7e9h
Q-score: 0.303
Lin S, Han S, Cai X, Tan Q, Zhou K, Wang D, Wang X, Du J, Yi C, Chu X, Dai A, Zhou Y, Chen Y, Zhou Y, Liu H, Liu J, Yang D, Wang MW, Zhao Q, Wu B
Nature (2021) 594 pp. 583-588 [ Pubmed: 34135510 DOI: doi:10.1038/s41586-021-03495-2 ]
- Complex of mglu4 homodimer with heterotrimeric gi3 protein in presence of antibody (Complex from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-3 (40 kDa, Protein from Homo sapiens)
- Metabotropic glutamate receptor 4 (99 kDa, Protein from Homo sapiens)
- Scfv16 (27 kDa, Protein from Homo sapiens)
- Phosphoserine (185 Da, Ligand)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
Cryo-EM map of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 7lua
Q-score: 0.267
Williams WB, Meyerhoff RR, Edwards RJ, Li H, Manne K, Nicely NI, Henderson R, Zhou Y, Janowska K, Mansouri K, Gobeil S, Evangelous T, Hora B, Berry M, Abuahmad AY, Sprenz J, Deyton M, Stalls V, Kopp M, Hsu AL, Borgnia MJ, Stewart-Jones GBE, Lee MS, Bronkema N, Moody MA, Wiehe K, Bradley T, Alam SM, Parks RJ, Foulger A, Oguin T, Sempowski GD, Bonsignori M, LaBranche CC, Montefiori DC, Seaman M, Santra S, Perfect J, Francica JR, Lynn GM, Aussedat B, Walkowicz WE, Laga R, Kelsoe G, Saunders KO, Fera D, Kwong PD, Seder RA, Bartesaghi A, Shaw GM, Acharya P, Haynes BF
Cell (2021) 184 pp. 2955- [ DOI: doi:10.1016/j.cell.2021.04.042 Pubmed: 34019795 ]
- Dh898.1 heavy chain (23 kDa, Protein from Homo sapiens)
- Cryo-em structure of dh898.1 fab-dimer bound near the cd4 binding site of hiv-1 env ch848 sosip trimer. (Complex from Human immunodeficiency virus 1)
- Env polyprotein (16 kDa, Protein from Simian-Human immunodeficiency virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Dh898.1 light chain (23 kDa, Protein from Homo sapiens)
- Ch848 sosip gp120 (52 kDa, Protein from Human immunodeficiency virus 1)
CryoEM structure of influenza hemagglutinin A/Victoria/361/2011 in complex with cyno antibody 3B10
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 6wzt
Q-score: 0.315
Darricarrere N, Qiu Y, Kanekiyo M, Creanga A, Gillespie RA, Moin SM, Saleh J, Sancho J, Chou TH, Zhou Y, Zhang R, Dai S, Moody A, Saunders KO, Crank MC, Mascola JR, Graham BS, Wei CJ, Nabel GJ
Sci Transl Med (2021) 13 [ DOI: doi:10.1126/scitranslmed.abe5449 Pubmed: 33658355 ]
- Hemagglutinin (Complex from Macaca fascicularis)
- Influenza hemagglutinin a/victoria/361/2011 in complex with 3b10 fab (336 kDa, Complex from Influenza A virus)
- Cyno antibody light chain (23 kDa, Protein from Macaca fascicularis)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin (56 kDa, Protein from Influenza A virus)
- Cyno antibody (Complex)
- Cyno antibody heavy chain (24 kDa, Protein from Macaca fascicularis)
CryoEM structure of influenza hemagglutinin A/Michigan/45/2015 in complex with cyno antibody 1C4
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6xgc
Q-score: 0.392
Darricarrere N, Qiu Y, Kanekiyo M, Creanga A, Gillespie RA, Moin SM, Saleh J, Sancho J, Chou TH, Zhou Y, Zhang R, Dai S, Moody A, Saunders KO, Crank MC, Mascola JR, Graham BS, Wei CJ, Nabel GJ
Sci Transl Med (2021) 13 [ DOI: doi:10.1126/scitranslmed.abe5449 Pubmed: 33658355 ]
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus (A/Michigan/45/2015(H1N1)))
- A/michigan/45/2015(h1n1) hemagglutinin in complex with 1c4 fab (320 MDa, Complex)
- Hemagglutinin ha2 chain (25 kDa, Protein from Influenza A virus (A/Michigan/45/2015(H1N1)))
- Hemagglutinin (Complex from Influenza A virus (A/Michigan/45/2015(H1N1)))
- 1c4 fab heavy chain (25 kDa, Protein from Macaca fascicularis)
- 1c4 fab (Complex from Macaca fascicularis)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 1c4 fab light chain (22 kDa, Protein from Macaca fascicularis)