EMPIAR-12160

Comparative 3D ultrastructure of Plasmodium falciparum gametocytes

Entry authors:
Evers F , Roverts R, Boshoven C , Lindert MK, Sinden RE, Akiva A , Kooij TWA , Verhoef JMJ , Sommerdijk N 
Publication:
Comparative 3D ultrastructure ofPlasmodium falciparumgametocytes
Evers F , Roverts R, Boshoven C , Kea-te Lindert M, Verhoef JM, Sinden RE, Akiva A, Kooij TW 
bioRxiv (2023)
Experiment type:
FIB-SEM
Deposited:
2024-03-24
Released:
2024-11-06
Last modified:
2024-11-06
Dataset size:
239.1 GB
Funding:
.
1. Netherlands Organisation for Scientific Research (NWO)
NWO-VIDI 864.13.009
Netherlands
Experimental metadata:
Contains:
micrographs
Image not available

Image sets

1. Pf_Gametocyte_#3
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:499
Frames per image:1
Image size:(1833, 893)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum gametocyte. Representative cell depicted in Fig. 1A. Voxel Size 5nm x 5nm x 15nm
2. Raw Image Stack Gametocyte Sample 1
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:2627
Frames per image:1
Image size:(4268, 2784)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Raw micrograph series for gametocyte sample #1. Voxel Size 5nm x 5nm x 15nm
3. Raw Image Stack Gametocyte Sample 2
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:952
Frames per image:1
Image size:(4428, 3804)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Raw micrograph series for gametocyte sample #2. Voxel Size 5nm x 5nm x 15nm
4. Raw Image Stack Gametocyte Sample 3
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:901
Frames per image:1
Image size:(4405, 2880)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Raw micrograph series for gametocyte sample #3. Voxel Size 5nm x 5nm x 15nm
5. Pf_Gametocyte_#16
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:804
Frames per image:1
Image size:(1296, 1392)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum gametocyte. Representative cell depicted in Fig. 1B. Voxel Size 5nm x 5nm x 15nm
6. Pf_Schizont_#1
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:410
Frames per image:1
Image size:(1230, 1386)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum schizont. Representative cell depicted in Fig. 1C. Voxel Size 5nm x 5nm x 15nm
7. Pf_Schizont_#12
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:421
Frames per image:1
Image size:(1476, 1314)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum schizont. Representative cell depicted in Fig. 1D. Voxel Size 5nm x 5nm x 15nm
8. Pf_Gametocyte_#9
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:594
Frames per image:1
Image size:(1416, 1686)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Fig. 4C / Supp. Fig. 2 Row 2. Voxel Size 5nm x 5nm x 15nm
9. Pf_Gametocyte_#4
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:624
Frames per image:1
Image size:(1984, 1060)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.1A Upper Cell. Voxel Size 5nm x 5nm x 15nm
10. Pf_Gametocyte_#13
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:405
Frames per image:1
Image size:(1290, 2010)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.1A Lower Cell. Voxel Size 5nm x 5nm x 15nm
11. Pf_Gametocyte_#1
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:568
Frames per image:1
Image size:(2596, 1028)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 First Row. Voxel Size 5nm x 5nm x 15nm
12. Pf_Gametocyte_#2
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:520
Frames per image:1
Image size:(1536, 1128)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 Third Row. Voxel Size 5nm x 5nm x 15nm
13. Pf_Gametocyte_#7
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:643
Frames per image:1
Image size:(1368, 990)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 Fourth Row. Voxel Size 5nm x 5nm x 15nm
14. Pf_Gametocyte_#10
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:677
Frames per image:1
Image size:(2568, 1146)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.2 Fifth Row. Voxel Size 5nm x 5nm x 15nm
15. Pf_Gametocyte_#15
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:590
Frames per image:1
Image size:(1314, 1596)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.6. Voxel Size 5nm x 5nm x 15nm
16. Pf_Gametocyte_#18
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:566
Frames per image:1
Image size:(2616, 1128)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.11B. Voxel Size 5nm x 5nm x 15nm
17. Pf_Gametocyte_#5
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:614
Frames per image:1
Image size:(1996, 752)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Representative cell depicted in Supp Fig.11C. Voxel Size 5nm x 5nm x 15nm
18. Pf_Gametocyte_#6
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:414
Frames per image:1
Image size:(2028, 1028)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
19. Pf_Gametocyte_#8
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:973
Frames per image:1
Image size:(2178, 1356)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
20. Pf_Gametocyte_#11
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:505
Frames per image:1
Image size:(2016, 846)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
21. Pf_Gametocyte_#19
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:511
Frames per image:1
Image size:(2064, 918)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
22. Pf_Gametocyte_#14
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:267
Frames per image:1
Image size:(1620, 1794)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Micrograph series of Plasmodium falciparum Gametocyte. Cell was used for nuclear rendering in Fig. 8. Voxel Size 5nm x 5nm x 15nm
23. Sample6_UnprocessedStack_Inlens_P1
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:348
Frames per image:1
Image size:(13044, 4019)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Raw micrograph series for Sample #6. Part 1/3. Voxel Size 5nm x 5nm x 15nm
24. Sample6_UnprocessedStack_InLens_P2
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:1423
Frames per image:1
Image size:(12893, 3728)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Raw micrograph series for Sample #6. Part 2/3. Voxel Size 5nm x 5nm x 15nm
25. Sample6_UnprocessedStack_InLens_P3
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:1234
Frames per image:1
Image size:(10487, 4683)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Raw micrograph series for Sample #6. Part 3/3. Voxel Size 5nm x 5nm x 15nm
26. Gametocytes #20-#50
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:31
Frames per image:1
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Image Stacks corresponding to additional gametocyte stacks that were used for quantification but no rendered in their entirety in any figures. Voxel Size 5nm x 5nm x 15nm
27. Aligned Serial Sectioning Image Stack Gametocytes
Category:micrographs - multiframe
Image format:TIFF
No. of images or tilt series:47
Frames per image:1
Image size:(9077, 14470)
Pixel type:UNSIGNED BYTE
Pixel spacing:(50 Å, 50 Å)
Details:
.Aligned serial sectioning micrograph series for Sample #1. Voxel Size 5nm x 5nm x 80nm
XAvailable download options:
Loading...

Browse All Files

empair
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice and Terms of Use.