ID   AAO41713; SV 1; linear; genomic DNA; STD; INV; 453 BP.
XX
PA   AE014298.5
XX
PR   Project:PRJNA13812;
XX
DT   30-AUG-2006 (Rel. 89, Created)
DT   25-JUN-2024 (Rel. 144, Last updated, Version 28)
XX
DE   Drosophila melanogaster (fruit fly) Odorant-binding protein 19d, isoform B
XX
KW   .
XX
OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
XX
RN   [1]
RX   DOI; 10.1126/science.287.5461.2185.
RX   PUBMED; 10731132.
RA   Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA   Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA   George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA   Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C.,
RA   Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C.,
RA   Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A.,
RA   An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A.,
RA   Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V.,
RA   Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J.,
RA   Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E.,
RA   Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B.,
RA   Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I.,
RA   Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C.,
RA   Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S.,
RA   Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M.,
RA   Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA   Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D.,
RA   Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F.,
RA   Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D.,
RA   Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A.,
RA   Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C.,
RA   McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C.,
RA   Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L.,
RA   Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R.,
RA   Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V.,
RA   Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
RA   Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E.,
RA   Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C.,
RA   Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A.,
RA   Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C.,
RA   Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G.,
RA   Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.,
RA   Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
RT   "The genome sequence of Drosophila melanogaster";
RL   Science 287(5461):2185-2195(2000).
XX
RN   [2]
RX   PUBMED; 12537568.
RA   Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
RA   Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
RA   George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
RA   Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
RA   Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
RA   Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
RT   "Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster
RT   euchromatic genome sequence";
RL   Genome Biol 3(12):.
XX
RN   [3]
RX   PUBMED; 12537572.
RA   Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA   Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA   Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
RA   Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A., Harris N.L.,
RA   Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C.,
RA   Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.;
RT   "Annotation of the Drosophila melanogaster euchromatic genome: a systematic
RT   review";
RL   Genome Biol 3(12):.
XX
RN   [4]
RX   PUBMED; 12537573.
RA   Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
RA   Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M.,
RA   Celniker S.E.;
RT   "The transposable elements of the Drosophila melanogaster euchromatin: a
RT   genomics perspective";
RL   Genome Biol 3(12):.
XX
RN   [5]
RX   PUBMED; 12537574.
RA   Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
RA   Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
RA   Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
RA   Karpen G.H.;
RT   "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly";
RL   Genome Biol 3(12):.
XX
RN   [6]
RX   PUBMED; 16110336.
RA   Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
RA   Ashburner M., Anxolabehere D.;
RT   "Combined evidence annotation of transposable elements in genome
RT   sequences";
RL   PLoS Comput Biol 1(2):166-175(2005).
XX
RN   [7]
RC   Erratum:[Science. 2007 Sep 7;317(5843):1325]
RX   DOI; 10.1126/science.1139815.
RX   PUBMED; 17569856.
RA   Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
RT   "The Release 5.1 annotation of Drosophila melanogaster heterochromatin";
RL   Science 316(5831):1586-1591(2007).
XX
RN   [8]
RX   DOI; 10.1126/science.1139816.
RX   PUBMED; 17569867.
RA   Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
RA   Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
RA   Dimitri P., Karpen G.H., Celniker S.E.;
RT   "Sequence finishing and mapping of Drosophila melanogaster
RT   heterochromatin";
RL   Science 316(5831):1625-1628(2007).
XX
RN   [9]
RX   PUBMED; 25589440.
RA   Hoskins R.A., Carlson J.W., Wan K.H., Park S., Mendez I., Galle S.E.,
RA   Booth B.W., Pfeiffer B.D., George R.A., Svirskas R., Krzywinski M.,
RA   Schein J., Accardo M.C., Damia E., Messina G., Mendez-Lago M.,
RA   de Pablos B., Demakova O.V., Andreyeva E.N., Boldyreva L.V., Marra M.,
RA   Carvalho A.B., Dimitri P., Villasante A., Zhimulev I.F., Rubin G.M.,
RA   Karpen G.H., Celniker S.E.;
RT   "The Release 6 reference sequence of the Drosophila melanogaster genome";
RL   Genome Res 25(3):445-458(2015).
XX
RN   [10]
RC   Publication Status: Online-Only
RX   PUBMED; 26109356.
RG   FlyBase Consortium
RA   Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B., St Pierre S.E.,
RA   Zhou P., Schroeder A.J., Falls K., Emmert D.B., Russo S.M., Gelbart W.M.;
RT   "Gene Model Annotations for Drosophila melanogaster: The Rule-Benders";
RL   G3 (Bethesda, Md.) 5(8):1737-1749(2015).
XX
RN   [11]
RC   Publication Status: Online-Only
RX   PUBMED; 26109357.
RG   FlyBase Consortium
RA   Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B., St Pierre S.E.,
RA   Gramates L.S., Zhou P., Schroeder A.J., Falls K., Strelets V., Russo S.M.,
RA   Gelbart W.M.;
RT   "Gene Model Annotations for Drosophila melanogaster: Impact of
RT   High-Throughput Data";
RL   G3 (Bethesda, Md.) 5(8):1721-1736(2015).
XX
RN   [12]
RG   Berkeley Drosophila Genome Project
RA   Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
RA   Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C.,
RA   Rubin G.;
RT   "Drosophila melanogaster release 4 sequence";
RL   Unpublished.
XX
RN   [13]
RA   Adams M.D., Celniker S.E., Gibbs R.A., Rubin G.M., Venter C.J.;
RT   ;
RL   Submitted (21-MAR-2000) to the INSDC.
RL   Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA
XX
RN   [14]
RG   Drosophila Heterochromatin Genome Project
RA   Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
RT   ;
RL   Submitted (01-AUG-2006) to the INSDC.
RL   Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley
RL   National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720,
RL   USA
XX
RN   [15]
RC   Direct Submission
RA   Celniker S., Carlson J., Kennedy C., Wan K., Frise E., Hoskins R., Park S.,
RA   Svirskas R., Karpen G.;
RT   ;
RL   Submitted (10-AUG-2006) to the INSDC.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
XX
RN   [16]
RC   Direct Submission
RA   Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
RA   Svirskas R., Rubin G.;
RT   ;
RL   Submitted (10-AUG-2006) to the INSDC.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
XX
RN   [17]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (07-DEC-2016) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [18]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (24-MAY-2018) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [19]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (22-APR-2019) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [20]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (20-APR-2020) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [21]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (19-OCT-2022) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [22]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (13-DEC-2023) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
DR   MD5; 08e76368b1bf9f8b09a8dc5ca4a16ce4.
DR   BioSample; SAMN02803731.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..453
FT                   /organism="Drosophila melanogaster"
FT                   /chromosome="X"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:7227"
FT   CDS             join(AE014298.5:20420138..20420285,
FT                   AE014298.5:20420416..20420504,
FT                   AE014298.5:20420577..20420713,
FT                   AE014298.5:20420778..20420856)
FT                   /codon_start=1
FT                   /gene="Obp19d"
FT                   /gene_synonym="19d"
FT                   /gene_synonym="BcDNA:HL07789"
FT                   /gene_synonym="BcDNA:RH68082"
FT                   /gene_synonym="PB-PRP2"
FT                   /gene_synonym="PBP2"
FT                   /gene_synonym="PBPRP-2"
FT                   /gene_synonym="PBPRP2"
FT                   /gene_synonym="Dmel\CG1668"
FT                   /gene_synonym="CG1668"
FT                   /gene_synonym="pbprp-2"
FT                   /gene_synonym="pbprp2"
FT                   /gene_synonym="DmelObp19d"
FT                   /gene_synonym="Pbprp2"
FT                   /gene_synonym="OBP19d"
FT                   /locus_tag="Dmel_CG1668"
FT                   /product="Odorant-binding protein 19d, isoform B"
FT                   /note="CG1668 gene product from transcript CG1668-RB;
FT                   CG1668-PB; Obp19d-PB; Pheromone-binding protein-related
FT                   protein 2"
FT                   /protein_id="AAO41713.1"
FT                   /translation="MSHLVHLTVLLLVGILCLGATSAKPHEEINRDHAAELANECKAET
FT                   GATDEDVEQLMSHDLPERHEAKCLRACVMKKLQIMDESGKLNKEHAIELVKVMSKHDAE
FT                   KEDAPAEVVAKCEAIETPEDHCDAAFAYEECIYEQMKEHGLELEEH"
XX
SQ   Sequence 453 BP; 116 A; 125 C; 146 G; 66 T; 0 other;
     atgtcgcatc tggttcacct gaccgtcctg ctcctagtgg gcatcctctg cctgggcgcc        60
     accagcgcca agccgcacga ggagatcaac agggaccacg ccgccgagct ggccaacgag       120
     tgcaaggctg agacgggagc caccgatgag gatgtggagc agctgatgag ccacgacctg       180
     cccgagagac acgaggccaa gtgcctgcgc gcctgcgtga tgaaaaagct gcagataatg       240
     gatgaatccg gtaagctgaa caaggaacac gccatcgagt tggtcaaggt catgagcaag       300
     cacgatgcag agaaggaaga cgctcccgcc gaggtggtgg ccaagtgcga ggccatcgag       360
     acacccgagg atcattgcga cgctgccttc gcctacgagg aatgcattta cgagcaaatg       420
     aaggagcatg gactcgagct ggaggagcac tga                                    453
//