ID   ABD49417; SV 1; linear; genomic DNA; STD; VRT; 1054 BP.
XX
PA   DQ385412.1
XX
DT   02-MAR-2006 (Rel. 87, Created)
DT   29-DEC-2008 (Rel. 98, Last updated, Version 3)
XX
DE   Phrynosoma hernandesi partial recombination activiating gene-1
XX
KW   .
XX
OS   Phrynosoma hernandesi
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera;
OC   Iguania; Phrynosomatidae; Phrynosomatinae; Phrynosoma.
XX
RN   [1]
RP   1-1054
RX   DOI; 10.1016/j.ympev.2005.12.016.
RX   PUBMED; 16488160.
RA   Leache A.D., McGuire J.A.;
RT   "Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear
RT   and mitochondrial data: evidence for a misleading mitochondrial gene tree";
RL   Mol. Phylogenet. Evol. 39(3):628-644(2006).
XX
RN   [2]
RP   1-1054
RA   Leache A.D., McGuire J.A.;
RT   ;
RL   Submitted (31-JAN-2006) to the INSDC.
RL   University of California, Berkeley, Museum of Vertebrate Zoology, 3101
RL   Valley Life Sciences Building, Berkeley, CA 94720, USA
XX
DR   MD5; 60248dd9b21c12541b980253f5652577.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1054
FT                   /organism="Phrynosoma hernandesi"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:107382"
FT   CDS             DQ385412.1:<1..>1054
FT                   /codon_start=3
FT                   /gene="RAG-1"
FT                   /product="recombination activiating gene-1"
FT                   /db_xref="GOA:Q27SA8"
FT                   /db_xref="InterPro:IPR001841"
FT                   /db_xref="InterPro:IPR013083"
FT                   /db_xref="InterPro:IPR017907"
FT                   /db_xref="InterPro:IPR018957"
FT                   /db_xref="InterPro:IPR019485"
FT                   /db_xref="InterPro:IPR023336"
FT                   /db_xref="InterPro:IPR024627"
FT                   /db_xref="InterPro:IPR035714"
FT                   /db_xref="InterPro:IPR036236"
FT                   /db_xref="UniProtKB/TrEMBL:Q27SA8"
FT                   /protein_id="ABD49417.1"
FT                   /translation="KGKVAATLDKVIEKEIETVSLMSKTPFETDTELNKGMQTTDKSAL
FT                   YMSQREVETHQANLQHLCRFCGGSFKTDPYKRSHPVHGPVDDETQALLRKKEKKATSWP
FT                   DLLAKVFKTDVKGDIDTIHPTKFCHQCWTVVQKKLNNFPCEMFFPKKSLVEWHPHSPSC
FT                   DVCGASFHGVKRKRKVLNPQLNKKLRMVTRSARKKRQIRNPKQVNQKSLVKMIASCKKI
FT                   HLTTKILAVDYPADFVKSISCQICEHILADPVETTCKHLFCRACILKCLKIMGSYCPAC
FT                   RYPCFPTDLVGPVKSFLTILNSLPVRCPVKDCQEEVCLGKYCHHLSRHKEVEDKEGYVY
FT                   INKGGRPRQH"
XX
SQ   Sequence 1054 BP; 358 A; 219 C; 226 G; 251 T; 0 other;
     ataaaggaaa agtggcagct actctggaca aagtcattga gaaagagatt gagacagtgt        60
     ctctaatgtc aaagacaccc tttgaaacag acactgagtt gaacaaaggt atgcagacaa       120
     cagataaaag tgccttatat atgagccaaa gagaggttga aacacaccag gcaaacctgc       180
     agcatctctg ccgcttctgt ggaggctcat ttaaaactga cccttataag agaagccatc       240
     cagttcatgg accagtagat gatgagactc aggcccttct cagaaagaaa gagaaaaagg       300
     caacatcttg gccagatctc cttgccaaag tttttaagac tgatgtgaag ggagacattg       360
     acacaatcca tcctacaaag ttttgtcacc agtgttggac tgtggttcaa aagaaattaa       420
     acaatttccc atgtgaaatg ttttttccaa agaaaagtct agtagagtgg catccccatt       480
     ccccaagctg tgatgtttgt ggtgcttcct tccatggagt gaagagaaag aggaaagttc       540
     ttaatccaca gttgaacaaa aaattgagga tggtgactag aagtgctagg aaaaaaagac       600
     aaataaggaa tccaaaacaa gtcaaccaaa agagtttagt gaaaatgatt gccagctgca       660
     agaagattca cctcactacc aaaatccttg cagtagacta tcctgcagac tttgtaaagt       720
     caatttcttg ccagatttgt gaacacatcc tggctgaccc agtagaaacg acatgcaaac       780
     acttattctg cagagcctgc atccttaaat gcctcaaaat aatgggaagc tattgtccag       840
     cttgccgcta tccttgcttt cctactgacc tggtaggccc tgtgaaatcc ttcctgacca       900
     tcctgaacag tctacctgtg agatgtccag tgaaagattg tcaggaagaa gtatgtttgg       960
     gaaaatactg tcaccatctt tccaggcaca aagaggtaga agacaaagag ggctatgtgt      1020
     acataaacaa aggtggccga ccaagacaac actt                                  1054
//