ID   ABI94638; SV 1; linear; genomic DNA; STD; VRL; 1056 BP.
XX
PA   DQ989799.1
XX
DT   02-OCT-2006 (Rel. 89, Created)
DT   05-OCT-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Human polyomavirus 1 VP2
XX
KW   .
XX
OS   Human polyomavirus 1
OC   Viruses; Polyomaviridae; Betapolyomavirus.
XX
RN   [1]
RX   DOI; 10.1128/JVI.00510-06.
RX   PUBMED; 16940499.
RA   Sharma P.M., Gupta G., Vats A., Shapiro R., Randhawa P.;
RT   "Phylogenetic analysis of polyomavirus BK sequences";
RL   J. Virol. 80(18):8869-8879(2006).
XX
RN   [2]
RA   Sharma P.M., Gupta G., Vats A., Shapiro R., Randhawa P.;
RT   ;
RL   Submitted (11-SEP-2006) to the INSDC.
RL   Transplant Pathology, University of Pittsburgh Medical Center, 3459 Fifth
RL   Ave, E737 Montefoire Hospital, Pittsburgh, PA 15213, USA
XX
DR   MD5; 94476059f149804429c2a8b4df4b8273.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1056
FT                   /organism="Human polyomavirus 1"
FT                   /isolate="PittNP2"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="urine of a kidney transplant patient
FT                   with history of BKV nephropathy"
FT                   /db_xref="taxon:1891762"
FT   CDS             DQ989799.1:237..1292
FT                   /codon_start=1
FT                   /product="VP2"
FT                   /db_xref="GOA:Q0PCN8"
FT                   /db_xref="InterPro:IPR001070"
FT                   /db_xref="UniProtKB/TrEMBL:Q0PCN8"
FT                   /protein_id="ABI94638.1"
FT                   /translation="MGAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEVQIASL
FT                   ATVEGITSTSEAIAAIGLTPQTYAVIAGAPGAIAGFAALIQTVTGISSLAQVGYRFFSD
FT                   WDHKVSTVGLYQQSGMALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFATISQ
FT                   ALWHVIRDDIPAITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQEYYSDL
FT                   SPIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQTVHSGEFIEKTIA
FT                   PGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNKKKRRVSRGSSQKAKGTRASAKT
FT                   TNKRRSRSSRS"
XX
SQ   Sequence 1056 BP; 306 A; 198 C; 239 G; 313 T; 0 other;
     atgggtgctg ctctagcact tttgggggac ctagttgcca gtgtatctga ggctgctgct        60
     gccacaggat tttcagtggc tgaaattgct gctggggagg ctgctgctgc tatagaagtt       120
     caaattgcat cccttgctac tgtagagggc ataacaagta cctcagaggc tatagctgct       180
     ataggcctaa ctcctcaaac atatgctgta attgctggtg ctcctggggc tattgctggg       240
     tttgctgctt taattcaaac tgttactggt attagttcct tggctcaagt agggtatagg       300
     ttttttagtg attgggatca caaagtttcc actgtaggcc tctatcagca atcaggcatg       360
     gctttggaat tgtttaaccc agatgagtac tatgatatat tgtttcctgg tgtaaatact       420
     tttgtaaata atattcaata ccttgatcct aggcattggg gtccttcttt gtttgctact       480
     atttctcagg ctttgtggca tgttattagg gatgatatac ctgctataac ctcacaagaa       540
     ttgcaaagaa gaacagaaag attttttaga gactccttgg ctagattttt ggaggaaact       600
     acctggacaa ttgtaaatgc ccctataaac ttttataatt atattcaaga atattattct       660
     gatctttccc ctattaggcc ctcaatggtt agacaagtag ctgaaaggga aggtacccgt       720
     gtacattttg gccatactta tagtatagat gatgctgaca gtatagaaga agttacacaa       780
     agaatggact taagaaatca acaaactgta cattcaggag agtttataga aaaaactatt       840
     gccccaggag gtgctaatca aagaactgct cctcaatgga tgttgccttt acttctaggc       900
     ctgtacggga ctgtaacacc tgctcttgaa gcatatgaag atggccccaa caaaaagaaa       960
     aggagagtgt ccaggggcag ctcccaaaaa gccaaaggaa cccgtgcaag tgccaaaact      1020
     actaataaaa ggaggagtag aagttctaga agttaa                                1056
//