ID   ACY82367; SV 1; linear; genomic DNA; STD; ROD; 1140 BP.
XX
PA   FJ842265.1
XX
DT   22-MAR-2011 (Rel. 108, Created)
DT   22-MAR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Rattus tanezumi (Oriental house rat) partial cytochrome b
XX
KW   .
XX
OS   Rattus tanezumi (Oriental house rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1140
RX   DOI; 10.1186/1471-2156-12-26.
RX   PUBMED; 21324204.
RA   Bastos A.D., Nair D., Taylor P.J., Brettschneider H., Kirsten F.,
RA   Mostert E., von Maltitz E., Lamb J.M., van Hooft P., Belmain S.R.,
RA   Contrafatto G., Downs S., Chimimba C.T.;
RT   "Genetic monitoring detects an overlooked cryptic species and reveals the
RT   diversity and distribution of three invasive Rattus congeners in South
RT   Africa";
RL   BMC Genet. 12:26-26(2011).
XX
RN   [2]
RP   1-1140
RA   Mostert M.E.;
RT   ;
RL   Submitted (10-MAR-2009) to the INSDC.
RL   Zoology & Entomology, University of Pretoria, Lynwood Rd, Pretoria, Gauteng
RL   0002, South Africa
XX
DR   MD5; 73fdb03eb7ea007c0f5848cae8294dd3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1140
FT                   /organism="Rattus tanezumi"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="South Africa"
FT                   /specimen_voucher="ER5"
FT                   /db_xref="taxon:35732"
FT   CDS             FJ842265.1:1..>1140
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="cytb"
FT                   /product="cytochrome b"
FT                   /db_xref="GOA:F2Q6R6"
FT                   /db_xref="InterPro:IPR005797"
FT                   /db_xref="InterPro:IPR005798"
FT                   /db_xref="InterPro:IPR016174"
FT                   /db_xref="InterPro:IPR027387"
FT                   /db_xref="InterPro:IPR030689"
FT                   /db_xref="InterPro:IPR036150"
FT                   /db_xref="UniProtKB/TrEMBL:F2Q6R6"
FT                   /protein_id="ACY82367.1"
FT                   /translation="MTNIRKSHPLLKIINHSFIDLPAPSNISSWWNFGSLLGVCLMVQI
FT                   ITGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYY
FT                   GSYTFLETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW
FT                   IWGGFSVDKATLTRFFTFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHP
FT                   YYTIKDLLGVFILLLFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAIL
FT                   RSIPNKLGGVVALVLSILILAFLPFLHTSKQRSLTFRPITQTLYWILVANLFILTWIGG
FT                   QPVEHPFIIIGQLASISYFSIILILMPISGIIEDKMLKWN"
XX
SQ   Sequence 1140 BP; 353 A; 318 C; 142 G; 327 T; 0 other;
     atgacaaaca ttcggaaatc acacccccta ctaaaaatca ttaaccactc cttcattgat        60
     cttccagccc catccaacat ctcatcatga tgaaattttg gctctcttct aggagtatgc       120
     cttatagttc aaattatcac aggcctattc ctagcaatac attacacatc cgacacttta       180
     acagcattct catcagttac ccacatctgc cgagacgtaa actatggctg actaatccga       240
     tacttacatg ccaatggagc ctcaatattc tttatctgct tattcctcca tgtaggccga       300
     gggatatact acggatccta caccttttta gaaacatgaa acattggggt tgtcctatta       360
     tttgcagtca tagcaaccgc attcataggt tatgtacttc catgaggaca aatatcattc       420
     tgaggggcca cagtaatcac aaacctatta tcagctatcc cctatattgg caccacccta       480
     gtcgaatgaa tctgaggagg cttctcagta gacaaagcaa ccctaacacg tttttttaca       540
     ttccacttca tcctcccatt tatcatcgcc gcccttgcaa ttgtacatct cctcttcctc       600
     cacgaaacag gatcaaacaa ccccacagga ctaaactctg acgcagacaa aatcccattt       660
     catccatact acacaattaa agacctactg ggagtattca ttctactcct atttctaata       720
     actctagtat tatttttccc agacttacta ggagacccag acaattacac acctgctaac       780
     ccactaaata ccccaccaca tattaagcca gaatgatact tcctatttgc ctacgctatt       840
     ctacgctcca tccctaacaa actaggagga gtagtagcct tagtcctatc aattctaatc       900
     ttagcctttc taccattctt acatacctca aaacaacgca gtctaacatt ccgcccaatc       960
     acccaaactc tgtactgaat tctagtagcc aacctcttca tcttaacatg aatcggaggc      1020
     caaccagtag aacacccatt tattattatt ggccaactag catctattag ttacttctca      1080
     attatcctta ttctaatacc aatttccgga atcattgaag acaaaatact aaaatgaaac      1140
//