ID   ACZ94513; SV 1; linear; genomic DNA; STD; INV; 333 BP.
XX
PA   AE013599.5
XX
PR   Project:PRJNA13812;
XX
DT   13-SEP-2006 (Rel. 89, Created)
DT   15-DEC-2023 (Rel. 144, Last updated, Version 17)
XX
DE   Drosophila melanogaster (fruit fly) NADH dehydrogenase (ubiquinone) B12
DE   subunit, isoform E
XX
KW   .
XX
OS   Drosophila melanogaster (fruit fly)
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
XX
RN   [1]
RX   DOI; 10.1126/science.287.5461.2185.
RX   PUBMED; 10731132.
RA   Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA   Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA   George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA   Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C.,
RA   Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C.,
RA   Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A.,
RA   An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A.,
RA   Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V.,
RA   Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J.,
RA   Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E.,
RA   Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B.,
RA   Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I.,
RA   Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C.,
RA   Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S.,
RA   Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M.,
RA   Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA   Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D.,
RA   Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F.,
RA   Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D.,
RA   Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A.,
RA   Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C.,
RA   McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C.,
RA   Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L.,
RA   Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R.,
RA   Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V.,
RA   Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
RA   Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E.,
RA   Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C.,
RA   Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A.,
RA   Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C.,
RA   Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G.,
RA   Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.,
RA   Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
RT   "The genome sequence of Drosophila melanogaster";
RL   Science 287(5461):2185-2195(2000).
XX
RN   [2]
RX   PUBMED; 12537568.
RA   Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
RA   Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
RA   George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
RA   Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
RA   Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
RA   Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
RT   "Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster
RT   euchromatic genome sequence";
RL   Genome Biol. 3(12):.
XX
RN   [3]
RX   PUBMED; 12537572.
RA   Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA   Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA   Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
RA   Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A., Harris N.L.,
RA   Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C.,
RA   Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.;
RT   "Annotation of the Drosophila melanogaster euchromatic genome: a systematic
RT   review";
RL   Genome Biol. 3(12):.
XX
RN   [4]
RX   PUBMED; 12537573.
RA   Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
RA   Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M.,
RA   Celniker S.E.;
RT   "The transposable elements of the Drosophila melanogaster euchromatin: a
RT   genomics perspective";
RL   Genome Biol. 3(12):.
XX
RN   [5]
RX   PUBMED; 12537574.
RA   Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
RA   Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
RA   Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
RA   Karpen G.H.;
RT   "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly";
RL   Genome Biol. 3(12):.
XX
RN   [6]
RX   PUBMED; 16110336.
RA   Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
RA   Ashburner M., Anxolabehere D.;
RT   "Combined evidence annotation of transposable elements in genome
RT   sequences";
RL   PLoS Comput Biol 1(2):166-175(2005).
XX
RN   [7]
RC   Erratum:[Science. 2007 Sep 7;317(5843):1325]
RX   DOI; 10.1126/science.1139815.
RX   PUBMED; 17569856.
RA   Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
RT   "The Release 5.1 annotation of Drosophila melanogaster heterochromatin";
RL   Science 316(5831):1586-1591(2007).
XX
RN   [8]
RX   DOI; 10.1126/science.1139816.
RX   PUBMED; 17569867.
RA   Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
RA   Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
RA   Dimitri P., Karpen G.H., Celniker S.E.;
RT   "Sequence finishing and mapping of Drosophila melanogaster
RT   heterochromatin";
RL   Science 316(5831):1625-1628(2007).
XX
RN   [9]
RX   PUBMED; 25589440.
RA   Hoskins R.A., Carlson J.W., Wan K.H., Park S., Mendez I., Galle S.E.,
RA   Booth B.W., Pfeiffer B.D., George R.A., Svirskas R., Krzywinski M.,
RA   Schein J., Accardo M.C., Damia E., Messina G., Mendez-Lago M.,
RA   de Pablos B., Demakova O.V., Andreyeva E.N., Boldyreva L.V., Marra M.,
RA   Carvalho A.B., Dimitri P., Villasante A., Zhimulev I.F., Rubin G.M.,
RA   Karpen G.H., Celniker S.E.;
RT   "The Release 6 reference sequence of the Drosophila melanogaster genome";
RL   Genome Res 25(3):445-458(2015).
XX
RN   [10]
RC   Publication Status: Online-Only
RX   PUBMED; 26109356.
RG   FlyBase Consortium
RA   Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B., St Pierre S.E.,
RA   Zhou P., Schroeder A.J., Falls K., Emmert D.B., Russo S.M., Gelbart W.M.;
RT   "Gene Model Annotations for Drosophila melanogaster: The Rule-Benders";
RL   G3 (Bethesda, Md.) 5(8):1737-1749(2015).
XX
RN   [11]
RC   Publication Status: Online-Only
RX   PUBMED; 26109357.
RG   FlyBase Consortium
RA   Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B., St Pierre S.E.,
RA   Gramates L.S., Zhou P., Schroeder A.J., Falls K., Strelets V., Russo S.M.,
RA   Gelbart W.M.;
RT   "Gene Model Annotations for Drosophila melanogaster: Impact of
RT   High-Throughput Data";
RL   G3 (Bethesda, Md.) 5(8):1721-1736(2015).
XX
RN   [12]
RG   Berkeley Drosophila Genome Project
RA   Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
RA   Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C.,
RA   Rubin G.;
RT   "Drosophila melanogaster release 4 sequence";
RL   Unpublished.
XX
RN   [13]
RA   Adams M.D., Celniker S.E., Gibbs R.A., Rubin G.M., Venter C.J.;
RT   ;
RL   Submitted (21-MAR-2000) to the INSDC.
RL   Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA
XX
RN   [14]
RG   Drosophila Heterochromatin Genome Project
RA   Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
RT   ;
RL   Submitted (01-AUG-2006) to the INSDC.
RL   Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley
RL   National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720,
RL   USA
XX
RN   [15]
RC   Direct Submission
RA   Celniker S., Carlson J., Kennedy C., Wan K., Frise E., Hoskins R., Park S.,
RA   Svirskas R., Karpen G.;
RT   ;
RL   Submitted (10-AUG-2006) to the INSDC.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
XX
RN   [16]
RC   Direct Submission
RA   Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
RA   Svirskas R., Rubin G.;
RT   ;
RL   Submitted (10-AUG-2006) to the INSDC.
RL   Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory,
RL   One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA
XX
RN   [17]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (07-OCT-2015) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [18]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (07-DEC-2016) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [19]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (24-MAY-2018) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [20]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (22-APR-2019) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [21]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (20-APR-2020) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [22]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (19-OCT-2022) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
RN   [23]
RG   FlyBase
RA   ;
RT   ;
RL   Submitted (13-DEC-2023) to the INSDC.
RL   FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave,
RL   Cambridge, MA 02138, USA
XX
DR   MD5; 23b7bf7152dabda01e00a3a10a2ea2b4.
DR   BioSample; SAMN02803731.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..333
FT                   /organism="Drosophila melanogaster"
FT                   /chromosome="2R"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:7227"
FT   CDS             join(AE013599.5:21658353..21658480,
FT                   AE013599.5:21658540..21658744)
FT                   /codon_start=1
FT                   /gene="ND-B12"
FT                   /gene_synonym="10320"
FT                   /gene_synonym="anon-EST:Posey47"
FT                   /gene_synonym="anon-EST:Posey84"
FT                   /gene_synonym="Dmel\CG10320"
FT                   /gene_synonym="CG10320"
FT                   /gene_synonym="NB2M"
FT                   /gene_synonym="dNDUFB3"
FT                   /gene_synonym="Q9W2E8"
FT                   /gene_synonym="NDUFB3"
FT                   /locus_tag="Dmel_CG10320"
FT                   /product="NADH dehydrogenase (ubiquinone) B12 subunit,
FT                   isoform E"
FT                   /note="CG10320 gene product from transcript CG10320-RE;
FT                   CG10320-PE; ND-B12-PE; NADH-ubiquinone oxidoreductase B12
FT                   subunit; NADH ubiquinone oxidoreductase B12;
FT                   NADH:ubiquinone oxidoreductase B12 subunit"
FT                   /db_xref="EnsemblGenomes-Tr:FBtr0071663"
FT                   /db_xref="EnsemblGenomes-Tr:FBtr0113101"
FT                   /db_xref="EnsemblGenomes-Tr:FBtr0113102"
FT                   /db_xref="EnsemblGenomes-Tr:FBtr0300679"
FT                   /db_xref="EnsemblGenomes-Tr:FBtr0300680"
FT                   /db_xref="GOA:Q9W2E8"
FT                   /db_xref="InterPro:IPR012576"
FT                   /db_xref="UniProtKB/TrEMBL:Q9W2E8"
FT                   /protein_id="ACZ94513.1"
FT                   /translation="MGGHHGEPYTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLRNE
FT                   VWRYEPKAFGTHRSRLNTFLFRGLGVGFCAFLATVAVEYALGIGKGQGGHGHGHGHEEH
FT                   GDKGHH"
XX
SQ   Sequence 333 BP; 69 A; 99 C; 110 G; 55 T; 0 other;
     atgggcggac atcacggcga accctacacg gtgccccacg catcgaccta caaggtggag        60
     agtgtgcccc aactcgtgga ggtgaaggag gctctgggcc gccagggatt gaaggatcca       120
     tggctgagga acgaagtctg gcgctatgag cccaaggcct tcggcaccca cagatcccgc       180
     ctgaacacct tccttttccg cggactcggc gtgggattct gcgctttcct ggccaccgtc       240
     gccgtggagt acgcgctggg cattggcaag ggtcagggcg gccatggaca tggccacggt       300
     cacgaggaac acggagataa gggccaccat tag                                    333
//