ID AHN59374; SV 1; linear; genomic DNA; STD; INV; 774 BP. XX PA AE014298.5 XX PR Project:PRJNA13812; XX DT 30-AUG-2006 (Rel. 89, Created) DT 25-JUN-2024 (Rel. 144, Last updated, Version 28) XX DE Drosophila melanogaster (fruit fly) crossveinless, isoform C XX KW . XX OS Drosophila melanogaster (fruit fly) OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila; Sophophora. XX RN [1] RX DOI; 10.1126/science.287.5461.2185. RX PUBMED; 10731132. RA Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., RA Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., RA George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., RA Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C., RA Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., RA Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., RA An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., RA Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., RA Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., RA Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., RA Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., RA Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., RA Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., RA Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., RA Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., RA Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., RA Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., RA Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., RA Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., RA Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., RA Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., RA McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., RA Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., RA Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., RA Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., RA Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., RA Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., RA Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., RA Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., RA Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., RA Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., RA Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., RA Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.; RT "The genome sequence of Drosophila melanogaster"; RL Science 287(5461):2185-2195(2000). XX RN [2] RX PUBMED; 12537568. RA Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., RA Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A., RA George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R., RA Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J., RA Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C., RA Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.; RT "Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster RT euchromatic genome sequence"; RL Genome Biol 3(12):. XX RN [3] RX PUBMED; 12537572. RA Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., RA Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., RA Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P., RA Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A., Harris N.L., RA Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., RA Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.; RT "Annotation of the Drosophila melanogaster euchromatic genome: a systematic RT review"; RL Genome Biol 3(12):. XX RN [4] RX PUBMED; 12537573. RA Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., RA Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., RA Celniker S.E.; RT "The transposable elements of the Drosophila melanogaster euchromatin: a RT genomics perspective"; RL Genome Biol 3(12):. XX RN [5] RX PUBMED; 12537574. RA Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., RA Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., RA Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., RA Karpen G.H.; RT "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly"; RL Genome Biol 3(12):. XX RN [6] RX PUBMED; 16110336. RA Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., RA Ashburner M., Anxolabehere D.; RT "Combined evidence annotation of transposable elements in genome RT sequences"; RL PLoS Comput Biol 1(2):166-175(2005). XX RN [7] RC Erratum:[Science. 2007 Sep 7;317(5843):1325] RX DOI; 10.1126/science.1139815. RX PUBMED; 17569856. RA Smith C.D., Shu S., Mungall C.J., Karpen G.H.; RT "The Release 5.1 annotation of Drosophila melanogaster heterochromatin"; RL Science 316(5831):1586-1591(2007). XX RN [8] RX DOI; 10.1126/science.1139816. RX PUBMED; 17569867. RA Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., RA Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A., RA Dimitri P., Karpen G.H., Celniker S.E.; RT "Sequence finishing and mapping of Drosophila melanogaster RT heterochromatin"; RL Science 316(5831):1625-1628(2007). XX RN [9] RX PUBMED; 25589440. RA Hoskins R.A., Carlson J.W., Wan K.H., Park S., Mendez I., Galle S.E., RA Booth B.W., Pfeiffer B.D., George R.A., Svirskas R., Krzywinski M., RA Schein J., Accardo M.C., Damia E., Messina G., Mendez-Lago M., RA de Pablos B., Demakova O.V., Andreyeva E.N., Boldyreva L.V., Marra M., RA Carvalho A.B., Dimitri P., Villasante A., Zhimulev I.F., Rubin G.M., RA Karpen G.H., Celniker S.E.; RT "The Release 6 reference sequence of the Drosophila melanogaster genome"; RL Genome Res 25(3):445-458(2015). XX RN [10] RC Publication Status: Online-Only RX PUBMED; 26109356. RG FlyBase Consortium RA Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B., St Pierre S.E., RA Zhou P., Schroeder A.J., Falls K., Emmert D.B., Russo S.M., Gelbart W.M.; RT "Gene Model Annotations for Drosophila melanogaster: The Rule-Benders"; RL G3 (Bethesda, Md.) 5(8):1737-1749(2015). XX RN [11] RC Publication Status: Online-Only RX PUBMED; 26109357. RG FlyBase Consortium RA Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B., St Pierre S.E., RA Gramates L.S., Zhou P., Schroeder A.J., Falls K., Strelets V., Russo S.M., RA Gelbart W.M.; RT "Gene Model Annotations for Drosophila melanogaster: Impact of RT High-Throughput Data"; RL G3 (Bethesda, Md.) 5(8):1721-1736(2015). XX RN [12] RG Berkeley Drosophila Genome Project RA Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., RA Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., RA Rubin G.; RT "Drosophila melanogaster release 4 sequence"; RL Unpublished. XX RN [13] RA Adams M.D., Celniker S.E., Gibbs R.A., Rubin G.M., Venter C.J.; RT ; RL Submitted (21-MAR-2000) to the INSDC. RL Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA XX RN [14] RG Drosophila Heterochromatin Genome Project RA Smith C.D., Shu S., Mungall C.J., Karpen G.H.; RT ; RL Submitted (01-AUG-2006) to the INSDC. RL Drosophila Heterochromatin Genome Project, Ernest Orlando Lawrence Berkeley RL National Laboratory, 1 Cyclotron Road, Mailstop 64-121, Berkeley, CA 94720, RL USA XX RN [15] RC Direct Submission RA Celniker S., Carlson J., Kennedy C., Wan K., Frise E., Hoskins R., Park S., RA Svirskas R., Karpen G.; RT ; RL Submitted (10-AUG-2006) to the INSDC. RL Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, RL One #Cyclotron RoadOne Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA XX RN [16] RC Direct Submission RA Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., RA Svirskas R., Rubin G.; RT ; RL Submitted (10-AUG-2006) to the INSDC. RL Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, RL One Cyclotron Road, MS 64-121, Berkeley, CA 94720, USA XX RN [17] RG FlyBase RA ; RT ; RL Submitted (07-DEC-2016) to the INSDC. RL FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, RL Cambridge, MA 02138, USA XX RN [18] RG FlyBase RA ; RT ; RL Submitted (24-MAY-2018) to the INSDC. RL FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, RL Cambridge, MA 02138, USA XX RN [19] RG FlyBase RA ; RT ; RL Submitted (22-APR-2019) to the INSDC. RL FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, RL Cambridge, MA 02138, USA XX RN [20] RG FlyBase RA ; RT ; RL Submitted (20-APR-2020) to the INSDC. RL FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, RL Cambridge, MA 02138, USA XX RN [21] RG FlyBase RA ; RT ; RL Submitted (19-OCT-2022) to the INSDC. RL FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, RL Cambridge, MA 02138, USA XX RN [22] RG FlyBase RA ; RT ; RL Submitted (13-DEC-2023) to the INSDC. RL FlyBase, Harvard University, Biological Laboratories, 16 Divinity Ave, RL Cambridge, MA 02138, USA XX DR MD5; a7e46cc8c8ef88ebc795527e75997b1b. DR BioSample; SAMN02803731. XX FH Key Location/Qualifiers FH FT source 1..774 FT /organism="Drosophila melanogaster" FT /chromosome="X" FT /mol_type="genomic DNA" FT /db_xref="taxon:7227" FT CDS join(AE014298.5:5690769..5690988, FT AE014298.5:5691892..5692104,AE014298.5:5692165..5692309, FT AE014298.5:5692377..5692572) FT /codon_start=1 FT /gene="cv" FT /gene_synonym="CG12410" FT /gene_synonym="Cv" FT /gene_synonym="cv-1" FT /gene_synonym="Dmel\CG12410" FT /gene_synonym="tsg2" FT /gene_synonym="Tsg2" FT /locus_tag="Dmel_CG12410" FT /product="crossveinless, isoform C" FT /note="CG12410 gene product from transcript CG12410-RC; FT CG12410-PC; cv-PC; crossveinless; twisted gastrulation 2" FT /protein_id="AHN59374.1" FT /translation="MEIWRSLTVGTIVLLAIVCFYGTVESCNEVVCASIVSKCMLTQSC FT KCELKNCSCCKECLKCLGKNYEECCSCVELCPKPNDTRNSLSKKSHVEDFDGVPELFNA FT VATPDEGDSFGYNWNVFTFQVDFDKYLKGPKLEKDGHYFLRTNDKNLDEAIQERDNIVT FT VNCTVIYLDQCVSWNKCRTSCQTTGASSTRWFHDGCCECVGSTCINYGVNESRCRKCPE FT SKGELGDELDDPMEEEMQDFGESMGPFDGPVNNNY" XX SQ Sequence 774 BP; 190 A; 200 C; 235 G; 149 T; 0 other; atggaaattt ggcgctcgct cacagtgggc accatcgtgc tattggccat cgtctgcttc 60 tacggcaccg tggagtcctg caacgaggtc gtctgcgcct cgatcgtctc caagtgcatg 120 ctcacccaga gctgcaagtg cgagctgaag aactgctcct gctgcaagga gtgcctcaaa 180 tgcctgggca agaactacga ggagtgctgc agctgtgtgg aactctgtcc gaagcccaac 240 gacacccgca actcgctgtc caagaagtcc cacgtggagg atttcgatgg agtgccggag 300 ctcttcaacg ccgtggccac tccggatgag ggcgacagct tcggatacaa ctggaacgtg 360 ttcacgtttc aagtggattt cgacaagtac ttgaagggac ccaagctgga gaaggacggt 420 cattacttct tgagaaccaa tgataagaac ctggacgaag cgattcagga gcgtgacaac 480 attgtgaccg taaactgcac ggttatatat ctggatcagt gcgtgtcgtg gaacaagtgc 540 cgcaccagct gccagacgac aggcgccagc agtacgagat ggttccacga cggctgctgc 600 gaatgtgtgg gatccacgtg catcaactac ggcgtaaacg agagccgctg tagaaagtgc 660 ccggagtcaa agggcgaact gggcgacgag ctggacgatc ccatggagga ggagatgcag 720 gacttcgggg agagcatggg tccgttcgat ggacccgtga acaacaacta ctga 774 //