ID   AKS44548; SV 1; linear; genomic RNA; STD; VRL; 3267 BP.
XX
PA   KP007193.1
XX
DT   19-NOV-2015 (Rel. 127, Created)
DT   19-NOV-2015 (Rel. 127, Last updated, Version 1)
XX
DE   Human rotavirus A RNA-dependent RNA polymerase
XX
KW   .
XX
OS   Human rotavirus A
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A.
XX
RN   [1]
RA   Yamamoto D., Oshitani H.;
RT   "Full genomic analysis of G1P[8] human Rotavirus with DS-1-like genome
RT   constellations in the Philippines";
RL   Unpublished.
XX
RN   [2]
RA   Yamamoto D., Oshitani H.;
RT   ;
RL   Submitted (20-OCT-2014) to the INSDC.
RL   Pediatrics, Kushiro City General Hospital, 1-12, Shunkodai, Kushiro,
RL   Hokkaido 085-0822, Japan
XX
DR   MD5; 4a77b144e0916eb0083fdeb34631fda7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3267
FT                   /organism="Human rotavirus A"
FT                   /host="Homo sapiens"
FT                   /strain="RVA/Human-wt/PHI/TGO12-016/2012/G1P[8]"
FT                   /mol_type="genomic RNA"
FT                   /country="Philippines"
FT                   /isolation_source="stool sample"
FT                   /collection_date="Aug-2012"
FT                   /db_xref="taxon:10941"
FT   CDS             KP007193.1:19..3285
FT                   /codon_start=1
FT                   /gene="VP1"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:A0A0R7VJL2"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007097"
FT                   /db_xref="InterPro:IPR022071"
FT                   /db_xref="InterPro:IPR042032"
FT                   /db_xref="UniProtKB/TrEMBL:A0A0R7VJL2"
FT                   /protein_id="AKS44548.1"
FT                   /translation="MGKYNLILSEYLSFIYNSQSAVQIPIYYSSNSELESRCIEFHSKC
FT                   LENSKNGLSLRKLFNEYSDVIENATLLSILSYSYDKYNAVERKLVKYAKGKPLEADLTV
FT                   NELDYENNKITSELFPTAEEYTDSLMDPAILTSLSSNLNAVMFWLEKHENDTAEKFKIY
FT                   KRRLDLFTIVASTVNKYGVPRHNAKYRYEYDVMKDKPYYLVTWANSSIEMLMSVFSHED
FT                   YLIARELIVLSYSNRSTLAKLVSSPMSILVALVDINGTFITNEELELEFSNKYVRAIVP
FT                   DQTFDELKQMLDNMRKAGLVDIPKMIQDWLVDCSIEKFPLMAKIYSWSFHVGFRKQKML
FT                   DAALDQLKTEYTEDVDDEMYREYTMLIRDEVVKMLEESVKHDDHLLQDSELAGLLSMSS
FT                   ASNGESRQLKFGRKTVFSTKKNMHVMDDMANGKYTPGIIPPVNADKPIPLGRRDVPGRR
FT                   TRIIFILPYEYFIAQHAVVEKMLIYAKHTREYAEFYSQSNQLLSYGDVTRFLSNNAMVL
FT                   YTDVSQWDSSQHNTQPFRKGIIMGLDILANMTNDVKVIQTLNLYKQTQINLMDSYVQIP
FT                   DGNVIKKIQYGAVASGEKQTKAANSIANLALIKTVLSRISNKYSFATKIIRVDGDDNYA
FT                   VLQFNTEVTKQMVQDVSNDVRETYARMNAKVKALVSTVGIEIAKRYIAGGKIFFRAGIN
FT                   LLNNEKRGQSTQWDQAAVLYSNYIVNRLRGFETDREFILTKIMQMTSVAITGSLRLFPS
FT                   ERVLTTNSTFKVFDSEDFIIEYGTTDDEVYIQRAFMSLSSQRSGIADEIAASPTFKNYV
FT                   SKLSEQLLFSKNNIVSRGIALTEKAKLNSYAPISLEKRRAQISALLTMLQKPVTFKSNK
FT                   ITINDILKDIKPFFTVNEAHLPIQYQKFMPTLPENVQYIVQCIGSRTYQIEDDGSKSAI
FT                   FRLISKYSVYKPSIEELYKVISLHENEIQLYLISLGIPKIDADTYVGSKIYSQDKYRIL
FT                   ESYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVTFILHLYAKLEVINHAIKN
FT                   GSWISLFCNYPKSEMIKLWKKMWNITSLRSPYTNANFFQD"
XX
SQ   Sequence 3267 BP; 1234 A; 486 C; 574 G; 973 T; 0 other;
     atggggaagt ataatctaat cttgtcagaa tatttatcat ttatatataa ttcacaatct        60
     gcagttcaaa ttccaattta ttattcttcc aatagtgaac tggaaagtag atgtatagaa       120
     tttcattcca aatgtttaga gaattcgaag aatggtctat cactgagaaa actattcaat       180
     gaatatagtg atgtcattga gaatgctacg ttattatcaa tattatcata ctcttacgac       240
     aaatataatg ctgttgagcg caaattagtc aaatatgcaa aaggtaaacc gcttgaggca       300
     gatttgacgg tgaatgaatt agattatgaa aataataaaa taacatctga actgtttcca       360
     acagcggaag aatacactga ctcattgatg gatccagcaa ttctaacttc cttgtcatca       420
     aatttaaacg cagtcatgtt ttggttggaa aaacacgaaa atgatactgc tgaaaaattt       480
     aagatttata aaaggagatt agacttattc actatagtag cctcaaccgt aaacaaatat       540
     ggtgtaccaa ggcataatgc aaaatataga tacgaatatg atgtgatgaa agataaacca       600
     tattacttag tgacatgggc aaactcttca attgaaatgc taatgtcagt cttttctcat       660
     gaagattatt taattgcaag agaattgata gtattatcat attctaatag atcaactttg       720
     gcaaaactag tgtcatctcc aatgtcaatt ttagttgctt tagtggatat taatggaacg       780
     tttattacga atgaagagtt agaattagag ttttcaaata aatacgtgcg agccatagta       840
     ccagatcaaa catttgatga attaaagcag atgcttgata atatgaggaa agctggatta       900
     gttgatatac ctaaaatgat acaagactgg ctagttgact gttctatcga gaaatttcca       960
     ctgatggcta aaatatactc atggtcgttt catgttggat tcaggaagca aaaaatgtta      1020
     gacgctgccc tagaccaatt gaaaactgaa tacacggaag atgtagatga cgaaatgtat      1080
     cgtgaatata caatgttaat aagagatgag gttgttaaaa tgcttgaaga atcggtaaaa      1140
     catgatgacc acctattaca agattctgaa ttagctggct tattatcaat gtcttcagca      1200
     tcgaatggag aatccagaca gcttaaattt ggtagaaaaa cagttttttc aactaaaaag      1260
     aacatgcatg ttatggatga tatggctaat ggaaaatata caccaggtat aattccacct      1320
     gtgaatgctg ataaaccaat accattagga agaagagatg taccaggaag aagaactaga      1380
     ataatattca tattgccgta tgaatatttt atagcacagc acgctgtggt tgagaaaatg      1440
     ttgatttatg caaagcatac cagagaatat gctgaattct attcgcaatc aaatcaactc      1500
     ttatcatacg gtgatgttac gcgtttcctc tctaataatg ctatggtgtt atatacagac      1560
     gtatctcaat gggattcatc tcaacataat acgcaaccgt ttaggaaagg aataataatg      1620
     ggattggata tattagctaa catgactaat gatgttaaag ttattcagac actaaattta      1680
     tataaacaaa cacaaattaa cttgatggat tcatatgttc aaataccaga tggtaatgtc      1740
     attaagaaaa tacagtatgg agctgtagca tcaggagaaa aacaaacgaa ggcagctaac      1800
     tctatagcga atctagcact aattaaaaca gttctatcac gtatttctaa taaatattca      1860
     tttgctacaa aaataataag agttgacggt gatgataact acgctgtgct acaatttaat      1920
     acagaagtga ctaaacaaat ggttcaagat gtttcaaacg atgtgagaga aacttacgca      1980
     cgaatgaatg ctaaagttaa agctctagta tccacggtag gaatagaaat agctaaaaga      2040
     tatattgcag gagggaaaat attcttcaga gcaggaataa acttacttaa taatgagaaa      2100
     agaggacaaa gtacgcaatg ggatcaggca gcagttttat actctaatta tattgtaaac      2160
     agacttagag gatttgagac tgatagagaa tttattttaa ctaaaataat gcaaatgacg      2220
     tctgttgcca ttactggatc gctgagactt tttccctctg aacgtgtgtt gactacgaat      2280
     tccacattta aggtgttcga ttcagaagat tttatcatag agtatggaac aactgatgat      2340
     gaagtatata tacagagagc atttatgtct ttgtcaagtc agagatcagg aatagctgat      2400
     gaaatagctg cgtcaccaac atttaaaaat tacgtgtcca aactatcaga acagctactt      2460
     ttttcaaaaa ataacatagt atctagagga atagctttga ctgaaaaagc gaaattaaat      2520
     tcgtatgcac caatatcact cgagaagaga cgcgcgcaga tatcagcttt gttaacaatg      2580
     ctacaaaaac cagtcacttt taaatcaaac aagataacaa taaacgacat acttaaagac      2640
     ataaaaccat tttttacagt gaatgaagca catttaccaa tacaatatca aaagtttatg      2700
     ccgaccttac cagaaaacgt acaatatata gttcagtgta tagggtcaag aacttaccaa      2760
     attgaagatg atggctcaaa atcagcgata ttccggctta tatcaaagta ttcagtttat      2820
     aaaccatcaa ttgaggagtt atataaagta atttcattac atgagaatga aatacaatta      2880
     tatttaattt cattaggcat accaaaaata gatgctgata catatgttgg ttcaaagatt      2940
     tactctcaag ataaatacag gatattggaa tcgtatgtgt ataacctgtt atccatcaat      3000
     tatggatgct atcaattatt cgactttaat tcaccggact tggaaaaatt aattagaata      3060
     ccatttaaag ggaagatacc agctgtcaca tttatactac atttatatgc taaattagaa      3120
     gttataaatc atgcaattaa gaatggttca tggataagtc tattctgtaa ctatccgaag      3180
     tcagaaatga taaagttatg gaagaaaatg tggaacatta cgtcattacg ttcaccatat      3240
     accaatgcaa atttctttca agattag                                          3267
//