ID AKS44548; SV 1; linear; genomic RNA; STD; VRL; 3267 BP. XX PA KP007193.1 XX DT 19-NOV-2015 (Rel. 127, Created) DT 19-NOV-2015 (Rel. 127, Last updated, Version 1) XX DE Human rotavirus A RNA-dependent RNA polymerase XX KW . XX OS Human rotavirus A OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Rotavirus; Rotavirus A. XX RN [1] RA Yamamoto D., Oshitani H.; RT "Full genomic analysis of G1P[8] human Rotavirus with DS-1-like genome RT constellations in the Philippines"; RL Unpublished. XX RN [2] RA Yamamoto D., Oshitani H.; RT ; RL Submitted (20-OCT-2014) to the INSDC. RL Pediatrics, Kushiro City General Hospital, 1-12, Shunkodai, Kushiro, RL Hokkaido 085-0822, Japan XX DR MD5; 4a77b144e0916eb0083fdeb34631fda7. XX FH Key Location/Qualifiers FH FT source 1..3267 FT /organism="Human rotavirus A" FT /host="Homo sapiens" FT /strain="RVA/Human-wt/PHI/TGO12-016/2012/G1P[8]" FT /mol_type="genomic RNA" FT /country="Philippines" FT /isolation_source="stool sample" FT /collection_date="Aug-2012" FT /db_xref="taxon:10941" FT CDS KP007193.1:19..3285 FT /codon_start=1 FT /gene="VP1" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:A0A0R7VJL2" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR022071" FT /db_xref="InterPro:IPR042032" FT /db_xref="UniProtKB/TrEMBL:A0A0R7VJL2" FT /protein_id="AKS44548.1" FT /translation="MGKYNLILSEYLSFIYNSQSAVQIPIYYSSNSELESRCIEFHSKC FT LENSKNGLSLRKLFNEYSDVIENATLLSILSYSYDKYNAVERKLVKYAKGKPLEADLTV FT NELDYENNKITSELFPTAEEYTDSLMDPAILTSLSSNLNAVMFWLEKHENDTAEKFKIY FT KRRLDLFTIVASTVNKYGVPRHNAKYRYEYDVMKDKPYYLVTWANSSIEMLMSVFSHED FT YLIARELIVLSYSNRSTLAKLVSSPMSILVALVDINGTFITNEELELEFSNKYVRAIVP FT DQTFDELKQMLDNMRKAGLVDIPKMIQDWLVDCSIEKFPLMAKIYSWSFHVGFRKQKML FT DAALDQLKTEYTEDVDDEMYREYTMLIRDEVVKMLEESVKHDDHLLQDSELAGLLSMSS FT ASNGESRQLKFGRKTVFSTKKNMHVMDDMANGKYTPGIIPPVNADKPIPLGRRDVPGRR FT TRIIFILPYEYFIAQHAVVEKMLIYAKHTREYAEFYSQSNQLLSYGDVTRFLSNNAMVL FT YTDVSQWDSSQHNTQPFRKGIIMGLDILANMTNDVKVIQTLNLYKQTQINLMDSYVQIP FT DGNVIKKIQYGAVASGEKQTKAANSIANLALIKTVLSRISNKYSFATKIIRVDGDDNYA FT VLQFNTEVTKQMVQDVSNDVRETYARMNAKVKALVSTVGIEIAKRYIAGGKIFFRAGIN FT LLNNEKRGQSTQWDQAAVLYSNYIVNRLRGFETDREFILTKIMQMTSVAITGSLRLFPS FT ERVLTTNSTFKVFDSEDFIIEYGTTDDEVYIQRAFMSLSSQRSGIADEIAASPTFKNYV FT SKLSEQLLFSKNNIVSRGIALTEKAKLNSYAPISLEKRRAQISALLTMLQKPVTFKSNK FT ITINDILKDIKPFFTVNEAHLPIQYQKFMPTLPENVQYIVQCIGSRTYQIEDDGSKSAI FT FRLISKYSVYKPSIEELYKVISLHENEIQLYLISLGIPKIDADTYVGSKIYSQDKYRIL FT ESYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVTFILHLYAKLEVINHAIKN FT GSWISLFCNYPKSEMIKLWKKMWNITSLRSPYTNANFFQD" XX SQ Sequence 3267 BP; 1234 A; 486 C; 574 G; 973 T; 0 other; atggggaagt ataatctaat cttgtcagaa tatttatcat ttatatataa ttcacaatct 60 gcagttcaaa ttccaattta ttattcttcc aatagtgaac tggaaagtag atgtatagaa 120 tttcattcca aatgtttaga gaattcgaag aatggtctat cactgagaaa actattcaat 180 gaatatagtg atgtcattga gaatgctacg ttattatcaa tattatcata ctcttacgac 240 aaatataatg ctgttgagcg caaattagtc aaatatgcaa aaggtaaacc gcttgaggca 300 gatttgacgg tgaatgaatt agattatgaa aataataaaa taacatctga actgtttcca 360 acagcggaag aatacactga ctcattgatg gatccagcaa ttctaacttc cttgtcatca 420 aatttaaacg cagtcatgtt ttggttggaa aaacacgaaa atgatactgc tgaaaaattt 480 aagatttata aaaggagatt agacttattc actatagtag cctcaaccgt aaacaaatat 540 ggtgtaccaa ggcataatgc aaaatataga tacgaatatg atgtgatgaa agataaacca 600 tattacttag tgacatgggc aaactcttca attgaaatgc taatgtcagt cttttctcat 660 gaagattatt taattgcaag agaattgata gtattatcat attctaatag atcaactttg 720 gcaaaactag tgtcatctcc aatgtcaatt ttagttgctt tagtggatat taatggaacg 780 tttattacga atgaagagtt agaattagag ttttcaaata aatacgtgcg agccatagta 840 ccagatcaaa catttgatga attaaagcag atgcttgata atatgaggaa agctggatta 900 gttgatatac ctaaaatgat acaagactgg ctagttgact gttctatcga gaaatttcca 960 ctgatggcta aaatatactc atggtcgttt catgttggat tcaggaagca aaaaatgtta 1020 gacgctgccc tagaccaatt gaaaactgaa tacacggaag atgtagatga cgaaatgtat 1080 cgtgaatata caatgttaat aagagatgag gttgttaaaa tgcttgaaga atcggtaaaa 1140 catgatgacc acctattaca agattctgaa ttagctggct tattatcaat gtcttcagca 1200 tcgaatggag aatccagaca gcttaaattt ggtagaaaaa cagttttttc aactaaaaag 1260 aacatgcatg ttatggatga tatggctaat ggaaaatata caccaggtat aattccacct 1320 gtgaatgctg ataaaccaat accattagga agaagagatg taccaggaag aagaactaga 1380 ataatattca tattgccgta tgaatatttt atagcacagc acgctgtggt tgagaaaatg 1440 ttgatttatg caaagcatac cagagaatat gctgaattct attcgcaatc aaatcaactc 1500 ttatcatacg gtgatgttac gcgtttcctc tctaataatg ctatggtgtt atatacagac 1560 gtatctcaat gggattcatc tcaacataat acgcaaccgt ttaggaaagg aataataatg 1620 ggattggata tattagctaa catgactaat gatgttaaag ttattcagac actaaattta 1680 tataaacaaa cacaaattaa cttgatggat tcatatgttc aaataccaga tggtaatgtc 1740 attaagaaaa tacagtatgg agctgtagca tcaggagaaa aacaaacgaa ggcagctaac 1800 tctatagcga atctagcact aattaaaaca gttctatcac gtatttctaa taaatattca 1860 tttgctacaa aaataataag agttgacggt gatgataact acgctgtgct acaatttaat 1920 acagaagtga ctaaacaaat ggttcaagat gtttcaaacg atgtgagaga aacttacgca 1980 cgaatgaatg ctaaagttaa agctctagta tccacggtag gaatagaaat agctaaaaga 2040 tatattgcag gagggaaaat attcttcaga gcaggaataa acttacttaa taatgagaaa 2100 agaggacaaa gtacgcaatg ggatcaggca gcagttttat actctaatta tattgtaaac 2160 agacttagag gatttgagac tgatagagaa tttattttaa ctaaaataat gcaaatgacg 2220 tctgttgcca ttactggatc gctgagactt tttccctctg aacgtgtgtt gactacgaat 2280 tccacattta aggtgttcga ttcagaagat tttatcatag agtatggaac aactgatgat 2340 gaagtatata tacagagagc atttatgtct ttgtcaagtc agagatcagg aatagctgat 2400 gaaatagctg cgtcaccaac atttaaaaat tacgtgtcca aactatcaga acagctactt 2460 ttttcaaaaa ataacatagt atctagagga atagctttga ctgaaaaagc gaaattaaat 2520 tcgtatgcac caatatcact cgagaagaga cgcgcgcaga tatcagcttt gttaacaatg 2580 ctacaaaaac cagtcacttt taaatcaaac aagataacaa taaacgacat acttaaagac 2640 ataaaaccat tttttacagt gaatgaagca catttaccaa tacaatatca aaagtttatg 2700 ccgaccttac cagaaaacgt acaatatata gttcagtgta tagggtcaag aacttaccaa 2760 attgaagatg atggctcaaa atcagcgata ttccggctta tatcaaagta ttcagtttat 2820 aaaccatcaa ttgaggagtt atataaagta atttcattac atgagaatga aatacaatta 2880 tatttaattt cattaggcat accaaaaata gatgctgata catatgttgg ttcaaagatt 2940 tactctcaag ataaatacag gatattggaa tcgtatgtgt ataacctgtt atccatcaat 3000 tatggatgct atcaattatt cgactttaat tcaccggact tggaaaaatt aattagaata 3060 ccatttaaag ggaagatacc agctgtcaca tttatactac atttatatgc taaattagaa 3120 gttataaatc atgcaattaa gaatggttca tggataagtc tattctgtaa ctatccgaag 3180 tcagaaatga taaagttatg gaagaaaatg tggaacatta cgtcattacg ttcaccatat 3240 accaatgcaa atttctttca agattag 3267 //