ID ALN12249; SV 1; linear; viral cRNA; STD; VRL; 2151 BP. XX PA KT932364.1 XX DT 03-JAN-2016 (Rel. 127, Created) DT 03-JAN-2016 (Rel. 127, Last updated, Version 1) XX DE Influenza A virus (A/ruddy turnstone/Ilha de Canelas/A08/2008(H11N9)) DE polymerase PA XX KW . XX OS Influenza A virus (A/ruddy turnstone/Ilha de Canelas/A08/2008(H11N9)) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Alphainfluenzavirus. XX RN [1] RC Publication Status: Online-Only RX PUBMED; 26689791. RA Hurtado R., Fabrizio T., Vanstreels R.E., Krauss S., Webby R.J., RA Webster R.G., Durigon E.L.; RT "Molecular Characterization of Subtype H11N9 Avian Influenza Virus Isolated RT from Shorebirds in Brazil"; RL PLoS One 10(12):E0145627-E0145627(2015). XX RN [2] RA Hurtado R., Fabrizio T., Vanstreels R.E.T., Krauss S., Webby R.J., RA Webster R.G., Durigon E.L.; RT ; RL Submitted (19-OCT-2015) to the INSDC. RL Department of Preventive Veterinary Medicine and Animal Health, School of RL Veterinary Medicine and Animal Science, University of Sao Paulo, Avenida RL Professor Orlando Marques de Paiva 87, Sao Paulo, Sao Paulo 05508270, RL Brazil XX DR MD5; 7c3cc4e8d3e85b1c080a5f37ff2069cd. XX FH Key Location/Qualifiers FH FT source 1..2151 FT /organism="Influenza A virus (A/ruddy turnstone/Ilha de FT Canelas/A08/2008(H11N9))" FT /segment="3" FT /host="Arenaria interpres (ruddy turnstone)" FT /strain="A/ruddy turnstone/Ilha de Canelas/A08/2008" FT /isolate="A08" FT /serotype="H11N9" FT /mol_type="viral cRNA" FT /country="Brazil:Ilha de Canelas, Para" FT /lat_lon="0.79 S 46.72 W" FT /collection_date="25-Nov-2008" FT /db_xref="taxon:1419066" FT CDS KT932364.1:25..2175 FT /codon_start=1 FT /gene="PA" FT /product="polymerase PA" FT /db_xref="GOA:A0A0U2Q8K4" FT /db_xref="InterPro:IPR001009" FT /db_xref="InterPro:IPR037534" FT /db_xref="InterPro:IPR038372" FT /db_xref="UniProtKB/TrEMBL:A0A0U2Q8K4" FT /protein_id="ALN12249.1" FT /translation="MEDFVRQCFNPMIVELAEKAMKEYGENPKIETNKFAAICTHLEVC FT FMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVDKPK FT FLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTL FT DEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMRRLADQSLPPN FT FSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLKLPDGPPCSQRSK FT FLLMDALKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLLAWKQ FT VLAELQDLESEEKIPKTKNMKKTSQLKWTLGENMAPEKVDFEDCKDVGDLKQYDSDEPE FT PRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEY FT IMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDV FT VNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNGTSKIKMK FT WGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGVEEGSIGK FT VCRTLLAKSVFNSLYASPQLEGFSAESRKLLLVVQALRDNLEPGTFDLGGLYEAIEECL FT INDPWVLLNASWFNSFLTHALK" XX SQ Sequence 2151 BP; 719 A; 437 C; 510 G; 485 T; 0 other; atggaagact ttgtgcgaca atgcttcaat ccaatgatcg tcgagcttgc ggaaaaggca 60 atgaaagagt atggggaaaa tccaaaaatc gaaactaaca aattcgctgc aatatgcact 120 cacttggaag tatgtttcat gtattcagac ttccacttca tagacgaacg gggcgaatca 180 ataattgtgg aatctggtga tccaaatgca ttactgaagc accgatttga gataattgaa 240 ggaagagacc gaacgatggc ctggacagtg gtgaatagca tctgcaacac cacaggggtc 300 gataagccta aattcctccc ggacctgtac gattacaagg aaaaccgatt tattgaaatt 360 ggagtgacac ggagagaggt ccatatatac tatctagaga aagccaataa aataaaatcc 420 gagaagacac acatccacat tttttcattt actggagaag aaatggccac aaaagcagac 480 tacacccttg acgaagaaag cagagcaagg atcaaaacca ggctattcac tataagacaa 540 gaaatggcca gcagaggcct atgggattcc tttcgtcaat ccgaaagagg cgaagagaca 600 attgaagaaa gatttgaaat cacaggaacc atgcgtaggc ttgccgacca aagtctccca 660 ccgaacttct ccagccttga aaactttaga gcctatgtgg atggattcga accgaacggc 720 tgcattgagg gcaagctttc tcaaatgtca aaagaagtga atgccagaat tgaaccattt 780 ctgaagacaa caccacgccc tctcaaacta cctgatgggc ccccttgctc tcagcggtca 840 aaattccttc tgatggatgc cttgaaacta agcattgaag acccaagtca tgagggagag 900 gggataccac tatatgatgc aatcaaatgc atgaagacat tttttggctg gaaagagccc 960 aacatagtca aaccacatga gaaaggcata aatcccaatt accttctggc ttggaagcaa 1020 gtgctagcag aactccagga ccttgagagt gaggagaaga tcccaaagac aaagaacatg 1080 aagaaaacaa gccaattgaa gtggacactt ggtgagaaca tggcaccaga aaaagtggac 1140 tttgaggatt gcaaggatgt tggcgatcta aaacagtacg atagcgatga gccagagcct 1200 agatcgctag caagctggat ccagagtgag ttcaataagg cgtgtgaatt gaccgactca 1260 agttggatag aacttgatga aataggggaa gatgttgctc cgattgaaca cattgcaagc 1320 atgaggagga actatttcac agcagaagtg tcccattgca gagccactga atacataatg 1380 aagggagtct acataaatac agccctactc aatgcatctt gtgcagccat ggatgatttt 1440 cagctgattc caatgataag caaatgtagg acaaaggaag gaagacggaa aacaaacctg 1500 tacgggttca tcataaaggg gaggtctcat ttgagaaatg atactgatgt ggtaaatttt 1560 gtgagcatgg aattttctct cactgaccca agactagaac cacacaaatg ggaaaagtac 1620 tgtgttctcg aaataggaga catgcttctg aggactgcaa taggccaggt gtcaaggccc 1680 atgttcctgt atgttagaac aaatgggacc tccaagatca agatgaaatg gggtatggaa 1740 atgaggcgct gccttcttca atctcttcaa cagattgaga gcatgatcga ggccgagtct 1800 tctgtcaaag aaaaggacat gactaaagaa ttctttgaaa acaagtcgga aacgtggcca 1860 attggagaat cccccaaagg ggtagaggaa ggctctatcg gaaaagtttg caggacacta 1920 cttgcgaaat ctgtattcaa cagtctatac gcatctccac aacttgaggg attttcagct 1980 gaatcaagga aattgcttct cgttgttcag gcgcttaggg acaacctgga acctggaacc 2040 ttcgatcttg gagggctata cgaagcaatt gaggaatgcc tgattaatga tccctgggtt 2100 ttgcttaatg catcttggtt caactccttc ctcacacatg cactgaaata g 2151 //