ID   ALWZ04S2073264; SV 1; linear; genomic DNA; CON; PLN; 115335 BP.
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AC   ALWZ04S2073264; ALWZ0400000000;
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PR   Project:PRJNA83435;
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DT   23-JUN-2017 (Rel. 133, Created)
DT   23-JUN-2017 (Rel. 133, Last updated, Version 1)
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DE   Picea glauca, whole genome shotgun sequence.
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KW   .
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OS   Picea glauca (white spruce)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Pinopsida; Pinidae; Pinales; Pinaceae; Picea.
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RN   [1]
RP   1-115335
RX   DOI; 10.1093/bioinformatics/btt178.
RX   PUBMED; 23698863.
RA   Birol I., Raymond A., Jackman S.D., Pleasance S., Coope R., Taylor G.A.,
RA   Yuen M.M., Keeling C.I., Brand D., Vandervalk B.P., Kirk H., Pandoh P.,
RA   Moore R.A., Zhao Y., Mungall A.J., Jaquish B., Yanchuk A., Ritland C.,
RA   Boyle B., Bousquet J., Ritland K., Mackay J., Bohlmann J., Jones S.J.;
RT   "Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome
RT   shotgun sequencing data";
RL   Bioinformatics 29(12):1492-1497(2013).
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RN   [2]
RP   1-115335
RA   Birol I., Bohlmann J., Keeling C.I., MacKay J., Paulino D., Raymond A.G.J.,
RA   Taylor G.A., Vandervalk B.P., Warren R.L., Yuen M.M.S.;
RT   "Insights into the intricate white spruce defense system revealed from
RT   high-quality genome resources established by scalable bioinformatics";
RL   Unpublished.
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RN   [3]
RP   1-115335
RG   SMarTForests Consortium
RA   ;
RT   ;
RL   Submitted (16-APR-2012) to the INSDC.
RL   Genome Sciences Centre, BC Cancer Agency, 570 West 7th Avenue, Vancouver,
RL   BC V5Z 4S6, Canada
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RN   [4]
RP   1-115335
RG   SMarTForests Consortium
RA   Birol I., Bohlmann J., Keeling C.I., MacKay J., Paulino D., Raymond A.G.J.,
RA   Taylor G.A., Vandervalk B.P., Warren R.L., Yuen M.M.S.;
RT   ;
RL   Submitted (22-JAN-2015) to the INSDC.
RL   Michael Smith Genome Sciences Centre, BC Cancer Agency, 570 West 7th Ave -
RL   Suite 100, Vancouver, BC V5Z 4S6, Canada
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DR   MD5; eb997b3049b519ac8fbd4f32fa0b0ab5.
DR   ENA; ALWZ04000000; SET.
DR   ENA; ALWZ00000000; SET.
DR   BioSample; SAMN01120252.
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CC   ##Genome-Assembly-Data-START##
CC   Assembly Date         :: 01-DEC-2014
CC   Assembly Method       :: ABySS v. 1.3.5
CC   Assembly Name         :: PG29_V4
CC   Genome Coverage       :: 65.0x
CC   Sequencing Technology :: Illumina HiSeq2000; MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..115335
FT                   /organism="Picea glauca"
FT                   /mol_type="genomic DNA"
FT                   /lat_lon="53.8531 N 122.236 W"
FT                   /tissue_type="Flushing bud"
FT                   /note="genotype: PG29"
FT                   /db_xref="taxon:3330"
FT   assembly_gap    18537..19755
FT                   /estimated_length=1219
FT                   /gap_type="within scaffold"
FT                   /linkage_evidence="paired-ends"
FT   assembly_gap    44527..44576
FT                   /estimated_length=50
FT                   /gap_type="within scaffold"
FT                   /linkage_evidence="paired-ends"
FT   assembly_gap    70737..70822
FT                   /estimated_length=86
FT                   /gap_type="within scaffold"
FT                   /linkage_evidence="paired-ends"
FT   assembly_gap    86447..86496
FT                   /estimated_length=50
FT                   /gap_type="within scaffold"
FT                   /linkage_evidence="paired-ends"
FT   assembly_gap    105251..105652
FT                   /estimated_length=402
FT                   /gap_type="within scaffold"
FT                   /linkage_evidence="paired-ends"
FT   assembly_gap    109786..110982
FT                   /estimated_length=1197
FT                   /gap_type="within scaffold"
FT                   /linkage_evidence="paired-ends"
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CO   join(ALWZ043202979.1:1..18536,gap(1219),ALWZ043202980.1:1..24771,gap(50),
CO   ALWZ043202981.1:1..26160,gap(86),ALWZ043202982.1:1..15624,gap(50),
CO   ALWZ043202983.1:1..18754,gap(402),ALWZ043202984.1:1..4133,gap(1197),
CO   ALWZ043202985.1:1..4353)
//