ID   ANE16146; SV 1; linear; genomic DNA; STD; MAM; 528 BP.
XX
PA   KU290778.1
XX
DT   19-MAY-2016 (Rel. 128, Created)
DT   26-MAY-2016 (Rel. 128, Last updated, Version 2)
XX
DE   Canis lupus familiaris (dog) NADH dehydrogenase subunit 6
XX
KW   .
XX
OS   Canis lupus familiaris (dog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RX   PUBMED; 27185408.
RA   Strakova A., Ni Leathlobhair M., Wang G.D., Yin T.T., Airikkala-Otter I.,
RA   Allen J.L., Allum K.M., Bansse-Issa L., Bisson J.L.,
RA   Castillo Domracheva A., de Castro K.F., Corrigan A.M., Cran H.R.,
RA   Crawford J.T., Cutter S.M., Delgadillo Keenan L., Donelan E.M.,
RA   Faramade I.A., Flores Reynoso E., Fotopoulou E., Fruean S.N.,
RA   Gallardo-Arrieta F., Glebova O., Hafelin Manrique R.F., Henriques J.J.,
RA   Ignatenko N., Koenig D., Lanza-Perea M., Lobetti R., Lopez Quintana A.M.,
RA   Losfelt T., Marino G., Martincorena I., Martinez Castaneda S.,
RA   Martinez-Lopez M.F., Meyer M., Nakanwagi B., De Nardi A.B., Neunzig W.,
RA   Nixon S.J., Onsare M.M., Ortega-Pacheco A., Peleteiro M.C., Pye R.J.,
RA   Reece J.F., Rojas Gutierrez J., Sadia H., Schmeling S.K., Shamanova O.,
RA   Ssuna R.K., Steenland-Smit A.E., Svitich A., Thoya Ngoka I., Vitalaru B.A.,
RA   de Vos A.P., de Vos J.P., Walkinton O., Wedge D.C., Wehrle-Martinez A.S.,
RA   van der Wel M.G., Widdowson S.A., Murchison E.P.;
RT   "Mitochondrial genetic diversity, selection and recombination in a canine
RT   transmissible cancer";
RL   elife 5:E14552-E14552(2016).
XX
RN   [2]
RA   Strakova A., Lawlor M., Wang G.-D., Yin T.-T., Airikkala-Otter I.,
RA   Allen J.L., Allum K.M., Bansse-Issa L., Bisson J.L.,
RA   Castillo Domracheva A., de Castro K.F., Corrigan A.M., Cran H.R.,
RA   Crawford J.T., Cutter S.M., Delgadillo Keenan L., Donelan E.M.,
RA   Faramade I.A., Flores Reynoso E., Fotopoulou E., Fruean S.N.,
RA   Gallardo-Arrieta F., Glebova O., Hafelin Manrique R.F., Henriques J.J.G.P.,
RA   Ignatenko N., Koenig D., Lanza-Perea M., Lobetti R., Lopez Quintana A.M.,
RA   Losfelt T., Marino G., Martincorena I., Martinez Castaneda S.,
RA   Martinez-Lopez M.F., Meyer M., Nakanwagi B., Barboza De Nardi A.,
RA   Neunzig W., Nixon S.J., Onsare M.M., Ortega-Pacheco A., Peleteiro M.C.,
RA   Pye R.J., Reece J.F., Rojas Gutierrez J., Sadia H., Schmeling S.K.,
RA   Shamanova O., Ssuna R.K., Steenland-Smit A.E., Svitich A.J.,
RA   Thoya Ngoka I., Vitalaru B.A., de Vos A.P., de Vos J.P., Walkinton O.,
RA   Wedge D.C., Wehrle-Martinez A.S., van der Wel M.G., Widdowson S.A.E.,
RA   Murchison E.P.;
RT   ;
RL   Submitted (10-DEC-2015) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire CB10 1SA, UK
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DR   MD5; 112859ccf8f21370e9d37195b556527e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..528
FT                   /organism="Canis lupus familiaris"
FT                   /organelle="mitochondrion"
FT                   /sub_species="familiaris"
FT                   /isolate="535T"
FT                   /mol_type="genomic DNA"
FT                   /country="Nicaragua"
FT                   /isolation_source="CTVT Clade 1 tumour"
FT                   /haplotype="CTVT_1B2b1_9"
FT                   /db_xref="taxon:9615"
FT   CDS             complement(KU290778.1:13582..14109)
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="ND6"
FT                   /product="NADH dehydrogenase subunit 6"
FT                   /db_xref="GOA:A0A172RGX3"
FT                   /db_xref="InterPro:IPR001457"
FT                   /db_xref="UniProtKB/TrEMBL:A0A172RGX3"
FT                   /protein_id="ANE16146.1"
FT                   /translation="MMTYIVFILSIVFVMSFVGFATKPSPIYGGLVLIISGGIGCAIVL
FT                   NFGGSFLGLMVFLIYLGGMLVVFGYTTAMATEQYPEVWVSNKAVLAAFVTGLLSELLTA
FT                   CYILKDDEVEVVLKFNGMGDWVIYDTGDSGFFSEEAVGIAALYSYGTWLVVVTGWSLLI
FT                   GVLVIMEVTRGN"
XX
SQ   Sequence 528 BP; 113 A; 54 C; 150 G; 211 T; 0 other;
     atgataacat acattgtatt tattttaagt atcgtttttg tgatgagttt tgtgggtttt        60
     gccactaaac catctcctat ttatggtggg cttgtgctaa ttattagcgg tgggattggt       120
     tgtgcgattg ttctgaattt tgggggttct tttttagggt tgatagtatt tttaatttat       180
     ttggggggta tattagtagt atttggttat acaactgcta tggctactga gcaataccct       240
     gaggtgtgag tttcaaataa ggctgttcta gcggcttttg ttactggttt gttgtctgaa       300
     ttgttgactg cttgctatat tttgaaggat gacgaggtgg aggtagtatt aaagtttaat       360
     ggaatagggg attgagtgat ctatgatacg ggggactctg ggttttttag tgaagaggct       420
     gtgggtattg cggctctgta cagttatggg acttggttgg tggttgttac aggctgatca       480
     ttattaattg gtgtgttggt tatcatggaa gttacccgtg gtaattaa                    528
//