ID   APH54803; SV 1; linear; genomic DNA; STD; PRO; 912 BP.
XX
PA   CP018191.1
XX
PR   Project:PRJNA352742;
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DT   08-DEC-2016 (Rel. 131, Created)
DT   30-AUG-2017 (Rel. 134, Last updated, Version 2)
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DE   Granulibacter bethesdensis Diaminopimelate epimerase
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KW   .
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OS   Granulibacter bethesdensis
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC   Acetobacteraceae; Granulibacter.
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RN   [1]
RA   Zarember K.A., Porcella S.F., Chu J., Ding L., Dahlstrom E., Barbian K.,
RA   Martens C., Sykora L., Kramer S., Pettinato A.M., Hong H., Wald G.,
RA   Berg L.J., Rogge L.S., Greenberg D.E., Falcone E.L., Neves J.F.,
RA   Simoes M.J., Casal M., Rodriguez-Lopez F.C., Zelazny A.M., Gallin J.I.,
RA   Holland S.M.;
RT   "Comparative genomic and phenotypic analysis of Granulibacter bethesdensis
RT   clinical isolates from patients with chronic granulomatous disease";
RL   Unpublished.
XX
RN   [2]
RA   Zarember K.A., Porcella S.F., Chu J., Ding L., Dahlstrom E., Barbian K.,
RA   Martens C., Sykora L., Kramer S., Pettinato A.M., Hong H., Wald G.,
RA   Berg L.J., Rogge L.S., Greenberg D.E., Falcone E.L., Neves J.F.,
RA   Simoes M.J., Casal M., Rodriguez-Lopez F.C., Zelazny A., Gallin J.I.,
RA   Holland S.M.;
RT   ;
RL   Submitted (22-NOV-2016) to the INSDC.
RL   Submissions, Igenbio, Inc, 1016 West Jackson Blvd Suite 411, Chicago, IL
RL   60607, USA
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RN   [3]
RC   Amino acid sequence updated by submitter
RA   Zarember K.A., Porcella S.F., Chu J., Ding L., Dahlstrom E., Barbian K.,
RA   Martens C., Sykora L., Kramer S., Pettinato A.M., Hong H., Wald G.,
RA   Berg L.J., Rogge L.S., Greenberg D.E., Falcone E.L., Neves J.F.,
RA   Simoes M.J., Casal M., Rodriguez-Lopez F.C., Zelazny A.M., Gallin J.I.,
RA   Holland S.M.;
RT   ;
RL   Submitted (15-AUG-2017) to the INSDC.
RL   Submissions, Igenbio, Inc, 1016 West Jackson Blvd Suite 411, Chicago, IL
RL   60607, USA
XX
DR   MD5; e7d2531d870458f86fecd64e61f04eb8.
DR   BioSample; SAMN05991787.
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FH   Key             Location/Qualifiers
FH
FT   source          1..912
FT                   /organism="Granulibacter bethesdensis"
FT                   /host="Homo sapiens"
FT                   /strain="NIH9.1"
FT                   /mol_type="genomic DNA"
FT                   /country="Spain:Cordoba"
FT                   /lat_lon="37.87 N 4.8 W"
FT                   /collected_by="Hospital Universitario Reina Sofia"
FT                   /collection_date="Aug-2006"
FT                   /db_xref="taxon:364410"
FT   CDS             complement(CP018191.1:1711480..1712391)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="GbCGDNIH9_1500"
FT                   /product="Diaminopimelate epimerase"
FT                   /EC_number="5.1.1.7"
FT                   /protein_id="APH54803.1"
FT                   /translation="MEFGQSLIGYAEAKIVLLTDAYALYKGGMLTDFIKMHGLGNDFVV
FT                   FDARKGRKLALSGSQAAAIADRRTGVGCDQLIVLEPSSVADAFMRIYNPDGSESGACGN
FT                   ATRCIADLLHRDGIAAPSMETVAGLLRAEITGDGICIDMGQPGLGWRDVPLAREMDTLF
FT                   LPLEAPGLKMPAACSMGNPHATFFVADLAALDIPATGPMLEHDPLFPERANIGHAQMLS
FT                   RSHIRLRVWERGAGLTLACGTGACATLVNAVRRGLAEREAVVELDGGQLRIHWREQDGH
FT                   VLMTGPAATVFHGRIALESIAG"
XX
SQ   Sequence 912 BP; 162 A; 237 C; 305 G; 208 T; 0 other;
     gtggaatttg gccaatcatt gattgggtat gctgaggcta aaattgttct attaaccgac        60
     gcctacgctt tatataaggg cggcatgttg accgatttca tcaagatgca cgggcttggg       120
     aacgatttcg ttgtctttga cgcacggaaa gggcgcaagc tcgctctttc cggctctcag       180
     gccgcagcga tcgctgatcg ccgtaccggg gtgggctgtg accagttgat cgtgctggag       240
     ccatcctcgg tggcggatgc ctttatgcgc atctacaatc ccgatggtag cgagtccggt       300
     gcttgcggta atgctacgcg ctgtatagcg gatctgctgc atcgggatgg tatcgccgcg       360
     cccagcatgg aaaccgttgc cggtctcctg cgggcagaaa tcaccggtga tggcatctgc       420
     atcgacatgg ggcagccagg gctgggctgg cgcgatgtgc cattggcgcg ggagatggat       480
     acgctgttcc tcccgttgga agcgcctggt ttgaagatgc cggctgcctg ttccatggga       540
     aatccccatg cgaccttctt tgtagccgat ctggcagcgt tggatattcc ggcgaccgga       600
     ccaatgctgg agcatgatcc gttgtttccg gagcgggcga atatcggcca tgcacaaatg       660
     ctatcccgct ctcatatccg gttacgggta tgggaacgcg gtgccgggct tactctggca       720
     tgcggtaccg gagcctgcgc cacgttggtg aacgcagtcc ggcgcggtct ggcggagcgg       780
     gaggctgtgg tggagctgga tggtggccaa ttgcggatcc actggcggga acaggatggg       840
     cacgtgctga tgactggccc ggccgcgaca gtgtttcatg gccgcattgc gctggaaagc       900
     atcgccggat ga                                                           912
//