ID   BAE23819; SV 1; linear; mRNA; HTC; MUS; 1387 BP.
XX
PA   AK138925.1
XX
DT   06-SEP-2005 (Rel. 85, Created)
DT   07-OCT-2010 (Rel. 106, Last updated, Version 11)
XX
DE   Mus musculus (house mouse) hypothetical protein
XX
KW   CAP trapper; HTC; HTC.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
XX
RN   [1]
RA   Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F.,
RA   Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M.,
RA   Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K.,
RA   Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T.,
RA   Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.;
RT   ;
RL   Submitted (30-MAR-2004) to the INSDC.
RL   Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical
RL   Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22
RL   Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL
RL   :http://www.osc.riken.jp/
XX
RN   [2]
RX   PUBMED; 16141072.
RG   The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
RA   ;
RT   "The Transcriptional Landscape of the Mammalian Genome";
RL   Science, e1252229 309(5740):1559-1563(2005).
XX
RN   [3]
RX   DOI; 10.1126/science.1112009.
RX   PUBMED; 16141073.
RG   RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
RA   ;
RT   "Antisense Transcription in the Mammalian Transcriptome";
RL   Science, e1252229 309(5740):1564-1566(2005).
XX
RN   [4]
RX   PUBMED; 12466851.
RG   The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
RA   ;
RT   "Analysis of the mouse transcriptome based on functional annotation of
RT   60,770 full-length cDNAs";
RL   Nature 420(6915):563-573(2002).
XX
RN   [5]
RX   PUBMED; 11217851.
RG   The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
RA   ;
RT   "Functional annotation of a full-length mouse cDNA collection";
RL   Nature 409(6821):685-690(2001).
XX
RN   [6]
RX   DOI; 10.1016/S0076-6879(99)03004-9.
RX   PUBMED; 10349636.
RA   Carninci P., Hayashizaki Y.;
RT   "High-efficiency full-length cDNA cloning";
RL   Meth. Enzymol. 303:19-44(1999).
XX
RN   [7]
RX   DOI; 10.1101/gr.145100.
RX   PUBMED; 11042159.
RA   Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA   Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT   "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT   full-length cDNA libraries for rapid discovery of new genes";
RL   Genome Res. 10(10):1617-1630(2000).
XX
RN   [8]
RX   DOI; 10.1101/gr.152600.
RX   PUBMED; 11076861.
RA   Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA   Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA   Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA   Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA   Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA   Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA   Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT   "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT   pipeline with 384 multicapillary sequencer";
RL   Genome Res. 10(11):1757-1771(2000).
XX
DR   MD5; b90af80687211a133c2746388c10a451.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1387
FT                   /organism="Mus musculus"
FT                   /strain="C57BL/6J"
FT                   /mol_type="mRNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /clone_lib="RIKEN full-length enriched mouse cDNA library"
FT                   /clone="A530010M17"
FT                   /tissue_type="aorta and vein"
FT                   /db_xref="taxon:10090"
FT   CDS             AK138925.1:279..>1665
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /note="nebulin-related anchoring protein (MGD|MGI:1098765
FT                   GB|AY177623, evidence: BLASTN, 99%, match=1466)"
FT                   /note="putative"
FT                   /db_xref="GOA:Q80XB4"
FT                   /db_xref="InterPro:IPR000900"
FT                   /db_xref="InterPro:IPR001781"
FT                   /db_xref="InterPro:IPR013998"
FT                   /db_xref="MGI:MGI:1098765"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q80XB4"
FT                   /protein_id="BAE23819.1"
FT                   /translation="MGGIDGKEDGEPFKSVLHWDMKSKAGAGAASRLMNERDYWPGYAE
FT                   GNTWCPGALPDPEIVRMVEARQSLGEGYTEDREQQQGKGSFPAMITPAYQRAKAANQLA
FT                   SQVQYKRGHDERVSTFTPVADTPELLRAKAGGQLQNDVRYTEDGGQQRGKGSFPAMITP
FT                   AYQIAKRATELASDVRYHQQYHREMKGMASPVGAEGGMTKDSVDRCGQVYSEECDEPRG
FT                   KGSFPAMITPAYQNAKKANELVSDIKYRQDFHKMKGAAHFHSLAAQDNLVLKRAQSVSK
FT                   LVSENKYKENYQTQLRGHYDGVGMDRRMLHALKVGSLASNVAYKADYKHDVVDYNYLAT
FT                   ATPFYQTTMRLVPLKDVNYRQNIDRMKFSSVTNTPQIVQAKINAQQLSHVNYRADYERN
FT                   KLNYTLPQDAPQLLKAKANAELFSEVKYKEGWQKTKGKGFEMKLDAMSLLAAKASGELA
FT                   SSVK"
XX
SQ   Sequence 1387 BP; 406 A; 332 C; 398 G; 251 T; 0 other;
     atgggaggga ttgacggcaa agaagatggc gagccattta aatccgttct ccattgggac        60
     atgaagtcca aagctggagc aggggcagct agccggctga tgaatgagag agactactgg       120
     ccagggtatg cagaagggaa cacttggtgt ccaggagctc tgccggaccc tgagattgta       180
     aggatggttg aagctcgaca gtctctcggt gaggggtaca cagaagaccg tgaacagcag       240
     cagggcaagg ggagctttcc agccatgatc acccctgcct accaaagggc caaggcagcc       300
     aaccagctgg ccagccaggt acaatacaag agaggccacg atgagcgggt ctccacattc       360
     actccagtgg cggacacgcc cgagctgctc cgtgccaaag ctgggggaca gcttcaaaat       420
     gacgtgaggt acacagaaga cggtgggcag cagagaggga aaggcagttt tcctgctatg       480
     atcacaccag cttatcagat agccaaaagg gccactgagc tggcgagtga tgtgaggtac       540
     catcaacaat atcatagaga aatgaaggga atggctagtc ctgtcggagc cgagggtggg       600
     atgacaaagg actctgtaga ccgatgtggc caggtttact cagaagagtg tgatgaaccc       660
     agaggaaagg gcagcttccc ggccatgatc accccagcgt atcagaacgc caagaaggcc       720
     aatgaacttg ttagtgacat aaaataccgg caggacttcc ataagatgaa aggtgcagcg       780
     cattttcact cccttgcagc ccaggacaac ttggttctta agcgagctca gagtgtgagc       840
     aagcttgtga gtgagaataa atataaagaa aactatcaga cccagctgag aggccactat       900
     gacggagtcg gcatggacag acgcatgctc cacgctctca aagttggcag cctggctagc       960
     aatgttgcct acaaggctga ttataaacat gacgttgtgg attacaacta cctggccact      1020
     gccactccat tctaccaaac aacgatgagg ctggttcccc tgaaggatgt caactacagg      1080
     cagaacattg acagaatgaa gttcagctcg gtgacaaaca cgccacagat tgttcaagct      1140
     aagatcaacg cccagcagct gagccatgtg aattaccgag ctgactacga gagaaacaag      1200
     ctgaactaca cattgcccca ggacgcccct cagctgctga aggccaaggc caatgcagaa      1260
     ctgttcagcg aggtgaagta caaagaaggc tggcagaaga caaaggggaa aggctttgag      1320
     atgaagctgg acgccatgtc tctgttggcc gccaaagcct cgggggagct tgctagcagc      1380
     gttaaat                                                                1387
//