ID BAE24311; SV 1; linear; mRNA; HTC; MUS; 843 BP. XX PA AK140275.1 XX DT 06-SEP-2005 (Rel. 85, Created) DT 07-OCT-2010 (Rel. 106, Last updated, Version 11) XX DE Mus musculus (house mouse) hypothetical protein XX KW CAP trapper; HTC; HTC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., RA Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., RA Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K., RA Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., RA Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (30-MAR-2004) to the INSDC. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) RA ; RT "The Transcriptional Landscape of the Mammalian Genome"; RL Science, e1252229 309(5740):1559-1563(2005). XX RN [3] RX DOI; 10.1126/science.1112009. RX PUBMED; 16141073. RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science, e1252229 309(5740):1564-1566(2005). XX RN [4] RX PUBMED; 12466851. RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420(6915):563-573(2002). XX RN [5] RX PUBMED; 11217851. RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium RA ; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9. RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100. RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600. RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR MD5; 58888903e32c2c61c0b2d0d405ff62f7. XX FH Key Location/Qualifiers FH FT source 1..843 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /sex="male" FT /dev_stage="adult" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="B230378H06" FT /tissue_type="corpora quadrigemina" FT /db_xref="taxon:10090" FT CDS AK140275.1:151..993 FT /codon_start=1 FT /transl_table=1 FT /note="putative" FT /note="similar to F-box ONLY protein 17 (UniProt|Q8BKF7, FT evidence: FASTY, 99.6%ID, 100%length, match=840)" FT /db_xref="GOA:Q6DIA9" FT /db_xref="InterPro:IPR001810" FT /db_xref="InterPro:IPR007397" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR036047" FT /db_xref="InterPro:IPR039752" FT /db_xref="MGI:MGI:2685007" FT /db_xref="UniProtKB/Swiss-Prot:Q6DIA9" FT /protein_id="BAE24311.1" FT /translation="MGAWISRTRVPTPEPDPQEVLDLSRLPPELLLLVLSHVPPRTLLM FT HCRRVCRAWRALVDGQALWLLLLARDHSAAGRALLTLARRCLPPAHEDTPCPLGQFCAL FT RPLGRNLISNPCGQEGLRKWMVRHGGDGWVVEKNRKPVPGAPSQTCFVTSFSWCRKKQV FT VDLVEKGLWPELLDSGGVEIAVSDWWGARHDSGCKYRLFVTLLDAHQNVIDKFSAVPDP FT IEQWNNDIYLQVTHVFSGIRRGIRFVSFEHWGQDTQFWAGHYGARVTNSSVIIRVCQS" XX SQ Sequence 843 BP; 153 A; 257 C; 264 G; 169 T; 0 other; atgggtgcct ggatatccag gacccgggtc ccgacgccgg agcccgaccc ccaggaggtc 60 ctggacctga gccgtctgcc cccggagctg ctcctgctgg tactgagcca cgtgcccccg 120 cgcacgctgc tgatgcactg ccgccgagtg tgccgcgcct ggcgcgccct ggtagatggc 180 caggccctat ggttgctgct gctggcccgt gaccacagcg cagcgggccg cgccctgctg 240 acactagccc gccgctgtct gccccctgcc cacgaagaca cgccctgccc gctgggccaa 300 ttctgcgcac tgagaccgct aggacgcaac ctcatcagca acccctgtgg ccaagaaggc 360 ctgcgcaaat ggatggtgcg gcacggtggg gatggatggg tggtggagaa gaacaggaaa 420 cctgtacctg gggccccttc acagacctgc ttcgtgactt ccttcagctg gtgtcgcaag 480 aagcaggtcg tggacctggt ggagaagggt ctgtggccag agctgctgga cagtggtggt 540 gtggagattg ctgtctctga ctggtgggga gctcgacatg acagtggctg taagtaccgt 600 ctctttgtca cgcttcttga tgcccaccag aacgtcatag ataagttctc cgctgtgcca 660 gatcccattg aacagtggaa caatgatatc tacctgcagg tcacccacgt gttctccggc 720 atcaggaggg gcatacgttt tgtctctttt gaacactggg gccaggacac acagttctgg 780 gctggccact atggggccag agtgacgaac tccagtgtga tcatacgagt ctgtcagtcc 840 tag 843 //