ID   BAE38118; SV 1; linear; mRNA; HTC; MUS; 1071 BP.
XX
PA   AK165281.1
XX
DT   09-SEP-2005 (Rel. 85, Created)
DT   07-OCT-2010 (Rel. 106, Last updated, Version 10)
XX
DE   Mus musculus (house mouse) hypothetical protein
XX
KW   CAP trapper; HTC; HTC.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
XX
RN   [1]
RA   Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F.,
RA   Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M.,
RA   Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K.,
RA   Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T.,
RA   Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.;
RT   ;
RL   Submitted (14-APR-2004) to the INSDC.
RL   Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical
RL   Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22
RL   Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL
RL   :http://www.osc.riken.jp/
XX
RN   [2]
RX   PUBMED; 16141072.
RG   The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
RA   ;
RT   "The Transcriptional Landscape of the Mammalian Genome";
RL   Science, e1252229 309(5740):1559-1563(2005).
XX
RN   [3]
RX   DOI; 10.1126/science.1112009.
RX   PUBMED; 16141073.
RG   RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium
RA   ;
RT   "Antisense Transcription in the Mammalian Transcriptome";
RL   Science, e1252229 309(5740):1564-1566(2005).
XX
RN   [4]
RX   PUBMED; 12466851.
RG   The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team
RA   ;
RT   "Analysis of the mouse transcriptome based on functional annotation of
RT   60,770 full-length cDNAs";
RL   Nature 420(6915):563-573(2002).
XX
RN   [5]
RX   PUBMED; 11217851.
RG   The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
RA   ;
RT   "Functional annotation of a full-length mouse cDNA collection";
RL   Nature 409(6821):685-690(2001).
XX
RN   [6]
RX   DOI; 10.1016/S0076-6879(99)03004-9.
RX   PUBMED; 10349636.
RA   Carninci P., Hayashizaki Y.;
RT   "High-efficiency full-length cDNA cloning";
RL   Meth. Enzymol. 303:19-44(1999).
XX
RN   [7]
RX   DOI; 10.1101/gr.145100.
RX   PUBMED; 11042159.
RA   Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA   Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT   "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT   full-length cDNA libraries for rapid discovery of new genes";
RL   Genome Res. 10(10):1617-1630(2000).
XX
RN   [8]
RX   DOI; 10.1101/gr.152600.
RX   PUBMED; 11076861.
RA   Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA   Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA   Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA   Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA   Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA   Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA   Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT   "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT   pipeline with 384 multicapillary sequencer";
RL   Genome Res. 10(11):1757-1771(2000).
XX
DR   MD5; 33307fc77bc619b691fedcb7b4c68750.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1071
FT                   /organism="Mus musculus"
FT                   /strain="C57BL/6J"
FT                   /mol_type="mRNA"
FT                   /dev_stage="6 days neonate"
FT                   /clone_lib="RIKEN full-length enriched mouse cDNA library"
FT                   /clone="F430009B21"
FT                   /tissue_type="spleen"
FT                   /db_xref="taxon:10090"
FT   CDS             AK165281.1:252..1322
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /note="FK506 binding protein 8 (MGD|MGI:1341070
FT                   GB|BC027808, evidence: BLASTN, 99%, match=1632)"
FT                   /note="putative"
FT                   /db_xref="GOA:O35465"
FT                   /db_xref="InterPro:IPR001179"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="InterPro:IPR013026"
FT                   /db_xref="InterPro:IPR019734"
FT                   /db_xref="MGI:MGI:1341070"
FT                   /db_xref="UniProtKB/Swiss-Prot:O35465"
FT                   /protein_id="BAE38118.1"
FT                   /translation="MGQPTVEEAEQPGALAREFLAATEPEPAPAPAPEEWLDILGNGLL
FT                   RMKTLVPGPKGSSRPLKGQVVTVHLQMSLENGTRVQEEPELAFTLGDCDVIQALDLSVP
FT                   LMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAEDGPDLEMLSGQERVA
FT                   LANRKRECGNAHYQRADFVLAANSYDLAIKAITSNTKVDMTCEEEEELLQLKVKCLNNL
FT                   AASQLKLDHYRAALRSCSQVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEP
FT                   SNKTIHAELSKLVKKRAAQRSTETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATA
FT                   VALGGVALSVVIAARN"
XX
SQ   Sequence 1071 BP; 235 A; 323 C; 336 G; 177 T; 0 other;
     atgggacagc ctacagtgga ggaggctgag cagcctggag ccctggctcg ggagttcctg        60
     gcagccacag agcctgagcc agccccagcc ccagccccgg aagagtggct ggacattctg       120
     gggaacggat tgctgcggat gaagacactg gtcccaggcc cgaaaggctc tagccgccca       180
     ctcaagggcc aggtggtgac cgttcacctg cagatgtccc tggagaatgg cacccgtgta       240
     caggaagagc ctgaactggc cttcacgctg ggagactgcg atgttatcca ggccctggac       300
     ctcagtgtcc cgctcatgga tgtgggcgag acagccatgg ttaccgctga ctccaagtac       360
     tgctacggcc cccagggcag caggagccca tacatccccc cccacgcagc cctgtgcctg       420
     gaagtcaccc tgaagacggc agaggatgga cccgacctgg agatgctgag tgggcaggag       480
     cgcgtggccc tggccaaccg caagcgggag tgtggcaatg cccactacca gcgtgccgac       540
     tttgtgctgg ccgccaattc ctatgacctg gccatcaagg ctatcacctc caacaccaaa       600
     gtggacatga cttgtgagga ggaagaggag ctgctacagc tgaaggtcaa gtgtctgaac       660
     aaccttgcgg cctcacagct gaagctggac cactaccgag cagctctgcg ctcctgtagc       720
     caggtgctgg agcaccagcc ggacaacatc aaggcactgt tccgcaaggg caaggtgctg       780
     gctcagcaag gtgaatatag tgaggccatc ccaatcctga gggctgccct gaagctggaa       840
     ccttccaaca agacgatcca cgcagagctc tcaaagctgg taaagaagcg tgctgcacag       900
     cggagcacag agaccgccct gtaccgaaag atgctaggca accccagccg gctgcctgcc       960
     aagtgtccgg gaaagggggc ctggtccatc ccgtggaaat ggctgtttgg ggcgactgcc      1020
     gtggccctgg ggggcgtggc tctctctgtg gtcattgctg ccaggaactg a               1071
//