ID BAE42545; SV 1; linear; mRNA; HTC; MUS; 2607 BP. XX PA AK171589.1 XX DT 09-SEP-2005 (Rel. 85, Created) DT 07-OCT-2010 (Rel. 106, Last updated, Version 10) XX DE Mus musculus (house mouse) hypothetical protein XX KW CAP trapper; HTC; HTC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RA Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K., Hori F., RA Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S., Kawai J., Kojima M., RA Konno H., Murata M., Nakamura M., Ninomiya N., Nishiyori H., Nomura K., RA Ohno M., Sakazume N., Sano H., Sasaki D., Shibata K., Shiraki T., RA Tagami M., Tagami Y., Waki K., Watahiki A., Muramatsu M., Hayashizaki Y.; RT ; RL Submitted (14-APR-2004) to the INSDC. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) RA ; RT "The Transcriptional Landscape of the Mammalian Genome"; RL Science, e1252229 309(5740):1559-1563(2005). XX RN [3] RX DOI; 10.1126/science.1112009. RX PUBMED; 16141073. RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science, e1252229 309(5740):1564-1566(2005). XX RN [4] RX PUBMED; 12466851. RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420(6915):563-573(2002). XX RN [5] RX PUBMED; 11217851. RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium RA ; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9. RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100. RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600. RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR MD5; af2d150e3fcb4470f39b8dfd316d152f. XX FH Key Location/Qualifiers FH FT source 1..2607 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="F730314H24" FT /cell_type="B6-derived CD11 +ve dendritic cells" FT /db_xref="taxon:10090" FT CDS AK171589.1:45..2651 FT /codon_start=1 FT /transl_table=1 FT /note="CD22 antigen (MGD|MGI:88322 GB|L02844, evidence: FT BLASTN, 99%, match=3330)" FT /note="putative" FT /db_xref="GOA:Q3TAX0" FT /db_xref="InterPro:IPR003598" FT /db_xref="InterPro:IPR003599" FT /db_xref="InterPro:IPR007110" FT /db_xref="InterPro:IPR013162" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR036179" FT /db_xref="MGI:MGI:88322" FT /db_xref="UniProtKB/TrEMBL:Q3TAX0" FT /protein_id="BAE42545.1" FT /translation="MRVHYLWLLLILGHVASARYSSANDWTVDHPQTLFAWEGACIRIP FT CKYKTPLPKARLDNILLFQNYEFDKATKKFTGTVLYNATKTEKDPESELYLSKQGRVTF FT LGNRIDNCTLKIHPIRANDSGNLGLRMTAGTERWMEPIHLNVSEKPFQPYIQMPSEIRE FT SQSVTLTCGLNFSCFGYDILLKWFLEDSEITSITSSVTSITSSVTSSIKNVYTESKLTF FT QPKWTDHGKSVKCQVQHSSKVLSERTVRLDVKYTPKLEIKVNPTEVEKNNSVTMTCRVN FT SSNPKLRTVAVSWFKDGRPLEDQELEQEQQMSKLILHSVTKDMRGKYRCQASNDIGPGE FT SEEVELTVHYAPEPSRVHIYPSPAEEGQSVELICESLASPSATNYTWYHNRKPIPGDTQ FT EKLRIPKVSPWHAGNYSCLAENRLGHGKIDQEAKLDVHYAPKAVTTVIQSFTPILEGDS FT VTLVCRYNSSNPDVTSYRWNPQGSGSVLKPGVLRIQKVTWDSMPVSCAACNHKCSWALP FT VILNVHYAPRDVKVLKVSPASEIRAGQRVLLQCDFAESNPAEVRFFWKKNGSLVQEGRY FT LSFGSVSPEDSGNYNCMVNNSIGETLSQAWNLQVLYAPRRLRVSISPGDHVMEGKKATL FT SCESDANPPISQYTWFDSSGQDLHSSGQKLRLEPLEVQHTGSYRCKGTNGIGTGESPPS FT TLTVYYSPETIGKRVALGLGFCLTICILAIWGMKIQKKWKQNRSQQGLQENSSGQSFFV FT RNKKARRTPLSEGPQSQGCYNPAMDDTVSYAILRFPESDTHNTGDAGTPATRAPPPNNS FT DSVTYSVIQKRPMGDYENVNPSCPEDESIHYSELVQFGAGKRPQAKEDVDYVTLKH" XX SQ Sequence 2607 BP; 691 A; 721 C; 669 G; 526 T; 0 other; atgcgcgtcc attacctgtg gctcctcttg atcctaggac acgtggcttc ggctcggtac 60 agctcagcaa atgattggac cgttgaccat ccccaaaccc tctttgcctg ggagggagcc 120 tgcatcagga ttccttgcaa gtacaaaact ccactaccca aggcacgtct ggacaacatc 180 ctcctttttc agaactatga gtttgacaag gccaccaaga aattcacagg aactgtcctg 240 tacaacgcca caaagactga gaaggaccca gagtctgagc tgtacctttc taagcaaggg 300 agagtaacat ttctggggaa cagaatagac aattgtaccc tgaaaatcca cccgatacgt 360 gccaatgaca gtgggaatct ggggttgagg atgaccgcag ggactgaacg atggatggag 420 cccattcacc tcaatgtctc ggagaaaccg ttccaacctt acatccagat gccatcagaa 480 atccgggaat cccaaagtgt cactctgacc tgtggactga atttctcctg ctttgggtat 540 gacatcctct tgaagtggtt cctagaagat tctgagatca cctccatcac ctcttctgtc 600 acctccatca cctcttctgt cacctcctcc attaagaatg tctatacaga gagcaagctc 660 accttccaac caaagtggac ggaccacgga aagagtgtga agtgccaagt ccagcactcc 720 tccaaagtgc tctcagagcg cactgtgcgt ctggatgtta agtatacccc gaagctggag 780 atcaaggtca atcccacaga ggtggaaaag aacaattctg tgaccatgac atgccgggtt 840 aacagcagca acccgaaact caggaccgtg gcggtgtctt ggttcaagga tgggcgcccc 900 ctagaggatc aggaactgga acaggaacaa cagatgtcca agctaattct gcattcagtg 960 accaaggaca tgagagggaa ataccggtgc caggcttcca acgacatagg cccaggagag 1020 tcggaagaag tggaactcac ggtgcactat gctccagaac cctccagggt tcacatctac 1080 ccttcccccg ctgaagaggg acagtcagta gagctgattt gtgagtcact ggccagtcca 1140 agtgcaacaa actacacctg gtatcacaac aggaaaccta tacctggaga cacccaagag 1200 aagctccgca tccctaaagt ctccccgtgg catgctggga attactcttg cttggcagag 1260 aaccgtctgg gtcatggaaa gatagaccag gaagctaagc tggatgtcca ttatgctccc 1320 aaggcggtga ccacagtgat tcagagcttc acaccaatcc tggaaggaga cagtgtgacc 1380 ctggtctgta ggtacaactc cagcaatcca gacgtcacct cctacagatg gaaccctcaa 1440 ggttctggga gtgtgctcaa acccggagtg ctgaggattc agaaagtgac atgggattcc 1500 atgcctgtca gctgtgctgc ctgcaaccac aagtgttcgt gggccctccc tgtcatcctg 1560 aatgtccact acgcccccag agacgtgaag gtactgaagg taagccccgc atcagagatc 1620 cgcgctgggc agcgtgtcct cctccaatgc gacttcgcag agagcaaccc ggcagaggtc 1680 cgcttcttct ggaagaagaa tgggagtctc gtgcaggaag ggaggtacct gagcttcggc 1740 tccgtctccc cagaagattc tggaaattat aactgcatgg tcaacaactc catcggagag 1800 accttgtcac aggcctggaa cctccaagtg ctgtatgctc ctcggaggct gcgtgtgtcc 1860 atcagccctg gggaccatgt gatggagggg aagaaggcca ccttgtcctg tgagagtgat 1920 gccaatccgc ccatctcaca gtacacctgg tttgactcca gtggccaaga cctccactcc 1980 tcaggccaga aactgagact ggaacccctg gaggtccaac acacgggttc ctaccgctgc 2040 aaagggacca atgggatagg cacaggagag tcaccaccca gcaccctcac tgtctactac 2100 agtccagaga ccatcggcaa gcgggtcgcc ttgggactag gcttctgcct gactatctgc 2160 atcctggcca tctgggggat gaaaatccag aaaaaatgga agcaaaaccg cagccagcag 2220 gggcttcagg aaaattccag tggccagagc ttttttgtga ggaacaaaaa ggctaggagg 2280 acccctctct cagaaggccc ccaatcccag ggatgctaca atccggcaat ggatgacacc 2340 gttagttatg ccatcttgcg ctttccagag agtgacacgc acaacactgg agatgcaggg 2400 accccagcaa cacgggctcc tcctccaaac aacagcgact cggtcactta ctcggtgata 2460 cagaagcggc ctatggggga ttatgagaat gtgaatccga gctgcccgga ggatgagagc 2520 atccattact cagagctggt tcagtttggg gctggtaagc ggccccaggc aaaggaagac 2580 gtagactatg tgaccctcaa gcactga 2607 //