ID   DQXJ01000000; SV 01; linear; genomic DNA; SET; ENV; 121 SQ.
XX
AC   DQXJ01000000;
XX
PR   Project:PRJNA480137;
XX
DT   16-SEP-2020 (Rel. 144, Created)
DT   16-SEP-2020 (Rel. 144, Last updated, Version 0)
XX
DE   TPA: Candidatus Altiarchaeales archaeon isolate HyVt-130, whole genome
DE   shotgun sequencing project.
XX
KW   ENV; MAG; TPA; WGS; TPA:assembly; Third Party Data;
KW   Metagenome Assembled Genome.
XX
OS   Candidatus Altiarchaeales archaeon
OC   Archaea; Candidatus Altarchaeota; Candidatus Altiarchaeia;
OC   Candidatus Altarchaeales.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-121
RX   PUBMED; 31911466.
RA   Zhou Z., Liu Y., Xu W., Pan J., Luo Z.H., Li M.;
RT   "Genome- and Community-Level Interaction Insights into Carbon Utilization
RT   and Element Cycling Functions of Hydrothermarchaeota in Hydrothermal
RT   Sediment";
RL   mSystems 5(1):e00795-19(2020).
XX
RN   [2]
RP   1-121
RA   Zhou Z.;
RT   ;
RL   Submitted (21-SEP-2018) to the INSDC.
RL   School of Biological Sciences, The University of Hong Kong, Kadoorie
RL   Biological Sciences Building, Hong Kong, Hong Kong
XX
DR   BioSample; SAMN09638296.
XX
CC   The Candidatus Altiarchaeales archaeon whole genome shotgun (WGS)
CC   project has the project accession DQXJ00000000.  This version of
CC   the project (01) has the accession number DQXJ01000000, and
CC   consists of sequences DQXJ01000001-DQXJ01000121.
CC   Annotation was added by the NCBI Prokaryotic Genome Annotation
CC   Pipeline (released 2013). Information about the Pipeline can be
CC   found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
CC   
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method        :: MEGAHIT v. 1.1.2
CC   Genome Representation  :: Full
CC   Expected Final Version :: Yes
CC   Genome Coverage        :: 59.53x
CC   Sequencing Technology  :: Illumina HiSeq 2500
CC   ##Genome-Assembly-Data-END##
CC   
CC   ##Genome-Annotation-Data-START##
CC   Annotation Provider               :: NCBI
CC   Annotation Date                   :: 02/25/2019 12:40:38
CC   Annotation Pipeline               :: NCBI Prokaryotic Genome
CC   Annotation Pipeline
CC   Annotation Method                 :: Best-placed reference protein
CC   set; GeneMarkS-2+
CC   Annotation Software revision      :: 4.7
CC   Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
CC   repeat_region
CC   Genes (total)                     :: 1,060
CC   CDSs (total)                      :: 1,034
CC   Genes (coding)                    :: 1,027
CC   CDSs (with protein)               :: 1,027
CC   Genes (RNA)                       :: 26
CC   rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
CC   complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
CC   tRNAs                             :: 21
CC   ncRNAs                            :: 2
CC   Pseudo Genes (total)              :: 7
CC   CDSs (without protein)            :: 7
CC   Pseudo Genes (ambiguous residues) :: 0 of 7
CC   Pseudo Genes (frameshifted)       :: 0 of 7
CC   Pseudo Genes (incomplete)         :: 6 of 7
CC   Pseudo Genes (internal stop)      :: 1 of 7
CC   CRISPR Arrays                     :: 1
CC   ##Genome-Annotation-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..121
FT                   /organism="Candidatus Altiarchaeales archaeon"
FT                   /environmental_sample
FT                   /isolate="HyVt-130"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico: Guaymas Basin, Gulf of California"
FT                   /lat_lon="27.0078 N 111.4071 W"
FT                   /isolation_source="marine hydrothermal sediment"
FT                   /collection_date="2009-12-02"
FT                   /note="Metagenome-assembled genome binned from sequencing
FT                   reads available in SRR5214304; metagenomic"
FT                   /db_xref="taxon:2250256"
FT                   /metagenome_source="marine metagenome"
XX
WGS  DQXJ01000001-DQXJ01000121
XX
//