ID   EU523992; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   EU523992;
XX
DT   03-MAY-2008 (Rel. 95, Created)
DT   06-MAR-2012 (Rel. 112, Last updated, Version 6)
XX
DE   Cottus aleuticus voucher BIOUG<CAN>:BCF-647-4 cytochrome oxidase subunit I
DE   (COI) gene, partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus aleuticus (coastrange sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-652
RX   PUBMED; 22423312.
RA   Hubert N., Hanner R., Holm E., Mandrak N.E., Taylor E., Burridge M.,
RA   Watkinson D., Dumont P., Curry A., Bentzen P., Zhang J., April J.,
RA   Bernatchez L.;
RT   "Identifying Canadian Freshwater Fishes through DNA Barcodes";
RL   PLoS One 3(6):e2490-e2490(2008).
XX
RN   [2]
RP   1-652
RA   Hubert N., Zhang J., April J., Bernatchez L., Hanner R., Holm E.,
RA   Mandrak N.E., Taylor E., Burridge M., Watkinson D., Curry A., Bentzen P.;
RT   ;
RL   Submitted (25-FEB-2008) to the INSDC.
RL   Biodiversity Institute of Ontario, University of Guelph, 579 Gordon Street,
RL   Guelph, Ontario N1G 2W1, Canada
XX
DR   MD5; e772429cbb6094058f6c363051319e51.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus aleuticus"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA"
FT                   /specimen_voucher="BIOUG<CAN>:BCF-647-4"
FT                   /PCR_primers="fwd_name: C_VF1LFt1, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaaccacaaagacattgg, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaaccacaargayatygg, fwd_seq:
FT                   tgtaaaacgacggccagtattcaaccaatcataaagatattgg, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaacca<i>aa<i>ga<i>at<i>gg,
FT                   rev_name: C_VR1LRt1, rev_seq:
FT                   caggaaacagctatgactagacttctgggtggccraaraayca, rev_seq:
FT                   caggaaacagctatgactagacttctgggtggccaaagaatca, rev_seq:
FT                   caggaaacagctatgactaaacttctggatgtccaaaaaatca, rev_seq:
FT                   caggaaacagctatgactagacttctgggtg<i>cc<i>aa<i>aa<i>ca"
FT                   /PCR_primers="fwd_name: C_FishF1t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_name:
FT                   C_FishR1t1, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:214914"
FT                   /bio_material="UOG:BIO:BCF-647-4"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:B2LI72"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B2LI72"
FT                   /protein_id="ACC92034.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 150 A; 201 C; 116 G; 185 T; 0 other;
     cctatatcta gtatttggtg cttgagccgg aatagtaggc acagccttaa gcctcctaat        60
     tcgagcagaa ctaagccaac ccggcgccct tttaggagac gaccagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taatcggggg       180
     tttcgggaac tgactcattc ccctaatgat cggcgcccct gatatggcct ttcctcgaat       240
     aaacaatatg agcttttgac tccttccccc atctttctta ctcctcctag cctcttcggg       300
     ggtcgaagca ggggccggaa ccggatgaac agtctaccct cccctcgccg gaaacctcgc       360
     ccacgccggg gcctctgttg acctaacgat cttctccctt cacctagcag gtatttcctc       420
     tattcttgga gcaatcaact ttatcacaac tatcattaat atgaaacccc ctgctatttc       480
     tcaataccag accccgctat tcgtgtgatc tgttcttatt actgctgtcc tactgcttct       540
     ttctctcccc gtacttgccg ccggcatcac aatgctccta acagaccgaa accttaacac       600
     caccttcttt gaccctgccg gagggggaga cccaatcctt taccaacacc tc               652
//