ID   FJ528515; SV 1; linear; genomic DNA; STD; INV; 533 BP.
XX
AC   FJ528515;
XX
DT   18-JAN-2009 (Rel. 99, Created)
DT   18-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Alpheus cf. armillatus F specimen 34 cytochrome oxidase subunit 1 gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Alpheus cf. armillatus F
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Alpheoidea; Alpheidae; Alpheus.
OG   Mitochondrion
XX
RN   [1]
RP   1-533
RX   DOI; 10.1016/j.ympev.2008.10.026.
RX   PUBMED; 19041948.
RA   Mathews L.M., Anker A.;
RT   "Molecular phylogeny reveals extensive ancient and ongoing radiations in a
RT   snapping shrimp species complex (Crustacea, Alpheidae, Alpheus
RT   armillatus)";
RL   Mol. Phylogenet. Evol. 50(2):268-281(2009).
XX
RN   [2]
RP   1-533
RA   Mathews L.M., Anker A.;
RT   ;
RL   Submitted (06-DEC-2008) to the INSDC.
RL   Biology, Worcester Polytechnic Institute, 100 Institute Road, Worcester, MA
RL   01609, USA
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DR   MD5; b6df6c3f946410dbd369ec15489b9596.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..533
FT                   /organism="Alpheus cf. armillatus F"
FT                   /organelle="mitochondrion"
FT                   /isolate="specimen 34"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:588309"
FT   CDS             <1..>533
FT                   /codon_start=3
FT                   /transl_table=5
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:B8YFI7"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B8YFI7"
FT                   /protein_id="ACL67985.1"
FT                   /translation="HPEVYILILPAFGMISHIINQESGKKEAFGTLGMIYAMAAIGILG
FT                   FVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLGTLHGSQFTYSPSLLWALG
FT                   FVFLFTMGGLTGVVLANSSIDIILHDTYYVVAHFHYVLSMGAVFGIFAGIAHWFPLFTG
FT                   LSLNPQWLKMHFFT"
XX
SQ   Sequence 533 BP; 157 A; 115 C; 86 G; 175 T; 0 other;
     ttcacccaga agtatacatt ttaattctac cagcttttgg tataatctct catattatta        60
     accaagaatc gggtaaaaaa gaagcatttg gaacattagg tataatttat gcaatagcag       120
     caattggaat tttaggattt gtagtatgag ctcaccatat attcacagtt ggtatagacg       180
     ttgacacacg ggcctatttc acttcagcaa ctataatcat tgctgtgcca actggaatta       240
     aaatcttcag atgattagga accctccatg gaagacaatt cacctacaga ccatcacttc       300
     tatgggcctt aggattcgta tttcttttca ctataggggg cttaactggc gtagtacttg       360
     ccaactcttc tatcgacatt attcttcacg acacttatta tgtagtagca cattttcatt       420
     acgtcctatc tataggagcg gtatttggaa tctttgccgg aatcgcacac tgatttccac       480
     tttttacagg cctatctcta aacccccaat gacttaaaat acacttcttc act              533
//