ID   FJ528516; SV 1; linear; genomic DNA; STD; INV; 533 BP.
XX
AC   FJ528516;
XX
DT   18-JAN-2009 (Rel. 99, Created)
DT   18-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Alpheus cf. armillatus H2 specimen 35 cytochrome oxidase subunit 1 gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Alpheus cf. armillatus H2
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Alpheoidea; Alpheidae; Alpheus.
OG   Mitochondrion
XX
RN   [1]
RP   1-533
RX   DOI; 10.1016/j.ympev.2008.10.026.
RX   PUBMED; 19041948.
RA   Mathews L.M., Anker A.;
RT   "Molecular phylogeny reveals extensive ancient and ongoing radiations in a
RT   snapping shrimp species complex (Crustacea, Alpheidae, Alpheus
RT   armillatus)";
RL   Mol. Phylogenet. Evol. 50(2):268-281(2009).
XX
RN   [2]
RP   1-533
RA   Mathews L.M., Anker A.;
RT   ;
RL   Submitted (06-DEC-2008) to the INSDC.
RL   Biology, Worcester Polytechnic Institute, 100 Institute Road, Worcester, MA
RL   01609, USA
XX
DR   MD5; 1560c993e638e8178e08c0f00c5aa98b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..533
FT                   /organism="Alpheus cf. armillatus H2"
FT                   /organelle="mitochondrion"
FT                   /isolate="specimen 35"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:588311"
FT   CDS             <1..>533
FT                   /codon_start=3
FT                   /transl_table=5
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:B8YFJ2"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B8YFJ2"
FT                   /protein_id="ACL67986.1"
FT                   /translation="HPEVYILILPAFGMISHIINQESGKKEAFGTLGMIYAMAAIGILG
FT                   FVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLGTLHGSQFTYSPSLLWALG
FT                   FVFLFTMGGLTGVVLANSSIDIILHDTYYVVAHFHYVLSMGAVFGIFAGIAHWYPLFTG
FT                   LSLNPQWLKMHFFT"
XX
SQ   Sequence 533 BP; 152 A; 128 C; 90 G; 163 T; 0 other;
     tccacccaga agtatacatt ttaattttac cagcttttgg cataatctct catatcatta        60
     accaagaatc agggaaaaag gaagcatttg gaacactggg tataatttat gcaatagcag       120
     caattggaat tttaggattc gtagtgtgag ctcaccacat attcacagtt gggatagacg       180
     ttgacacacg agcttatttc acttcagcaa ctataatcat tgctgtgcca actggaatta       240
     aaatcttcag atgactggga accctccatg gaagacaatt cacctacaga ccctcactac       300
     tctgagcctt aggattcgtc tttcttttca ctataggagg cctgactggt gtagtactcg       360
     ccaactcttc tatcgatatt attctccacg acacttatta tgtagtggct cacttccact       420
     acgtcctatc tataggagca gtattcggaa tctttgctgg tatcgcccac tgataccctc       480
     tctttacagg actatcacta aacccccaat ggcttaaaat acactttttc act              533
//