ID   GQ174383; SV 1; linear; genomic DNA; STD; VRT; 898 BP.
XX
AC   GQ174383;
XX
DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Lepidocephalichthys sp. JCH-2010 isolate FLMNH 2008-0519 recombination
DE   activation protein 1 (RAG1) gene, partial cds.
XX
KW   .
XX
OS   Lepidocephalichthys zeppelini
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cobitidae; Cobitinae; Lepidocephalichthys.
XX
RN   [1]
RP   1-898
RA   Havird J.C., Page L.M., Tangjitjaroen W.;
RT   "A new species of Lepidocephalichthys with a highly distinctive lamina
RT   circularis and comments on sexual dimorphism and relationships in southern
RT   lineages of Cobitidae";
RL   Unpublished.
XX
RN   [2]
RP   1-898
RA   Havird J.C., Page L.M., Tangjitjaroen W.;
RT   ;
RL   Submitted (19-MAY-2009) to the INSDC.
RL   Florida Museum of Natural History, University of Florida, Dickinson Hall,
RL   Gainesville, FL 32611, USA
XX
DR   MD5; 68850fe0ccb83e3c585ec84793feffba.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..898
FT                   /organism="Lepidocephalichthys zeppelini"
FT                   /isolate="FLMNH 2008-0519"
FT                   /mol_type="genomic DNA"
FT                   /country="Thailand:Ubon Ratchathani"
FT                   /specimen_voucher="UF 171981"
FT                   /note="type: paratype"
FT                   /db_xref="taxon:743468"
FT   gene            <1..>898
FT                   /gene="RAG1"
FT   mRNA            <1..>898
FT                   /gene="RAG1"
FT                   /product="recombination activation protein 1"
FT   CDS             <1..>898
FT                   /codon_start=1
FT                   /gene="RAG1"
FT                   /product="recombination activation protein 1"
FT                   /db_xref="GOA:F6J0Q2"
FT                   /db_xref="InterPro:IPR024627"
FT                   /db_xref="UniProtKB/TrEMBL:F6J0Q2"
FT                   /protein_id="ADD82295.1"
FT                   /translation="IFQPLHTLRSAEKELLPGYHQFEWQPALKNVSSSWDVXILDGLSG
FT                   WMSSVDDVPAETIXRRFXYDVALVSAXKXLXXDXMDGLRIRGLDDSTCTSGFTVVVKES
FT                   CDGMGDVSEKHGTGPAVPEKAVRFSFTIMSISILADGEEDAVTIFQEQKPNSELSCRPL
FT                   CLMFVDESDHETLTAILGPVVAERKAMLESRLILSVGGLLRSFRFYFRGTGYDEKMVRE
FT                   MEGLEASGSMYVCTLCDSTRAEASQNMVLHSITRXHSENLERYEIWRTNPFSETAEELR
FT                   DRVKGVSAKPFMETQPTL"
XX
SQ   Sequence 898 BP; 211 A; 197 C; 240 G; 235 T; 15 other;
     atattccagc ctctgcacac cctacgsagt gcagagaaag agcttcttcc tggctaccat        60
     cagtttgaat ggcaaccggc tctgaagaat gtttccagct cctgggatgt grgcatcctt       120
     gatggcctct ctggctggat gtcstctgtg gacgatgtcc ctgctgagac catckccagg       180
     aggttccsct atgatgtggc attrgtttct gcrtwkaaar amctggakga mgacwtcatg       240
     gatgggttaa gaataagagg cttggatgac agcacatgta cctctggttt tactgtggtg       300
     gtaaaggaat cgtgtgatgg tatgggagat gttagcgaga agcatggaac tggcccggca       360
     gtgcctgaaa aggcagtgag gttttccttc accatcatgt ctatctccat cctagctgac       420
     ggtgaggagg acgcagtcac tatcttccaa gaacagaagc caaactctga gctgtcctgt       480
     agacctttgt gtctgatgtt cgtggatgaa tcagatcatg aaaccctcac ggccatcttg       540
     ggacctgtgg tggcagagag gaaagccatg ttggaaagtc gacttatctt gtctgtgggt       600
     ggtttgctgc gctcttttag gttctatttt agaggtacag gctatgatga gaagatggta       660
     cgtgaaatgg aaggtctaga agcttcaggt tccatgtatg tatgcactct ttgtgattcc       720
     actcgtgccg aggcctctca aaacatggtg ctgcattcca tcacacgcag ncacagtgaa       780
     aacttggagc gttatgaaat ttggaggaca aatccgttct cggaaaccgc agaggaactt       840
     cgtgaccgag tcaaaggtgt ctctgcaaag cctttcatgg agacccagcc caccctgt         898
//