ID HAE3645169; SV 1; linear; genomic DNA; CON; BCT; 3546 BP.
XX
PA DAARRO010000004.1
XX
PR Project:PRJNA514245;
XX
DT 12-FEB-2020 (Created)
DT 12-FEB-2020 (Last updated)
XX
DE Salmonella enterica subsp. enterica serovar Hadar exodeoxyribonuclease V
DE subunit beta
XX
KW WGS; TPA; TPA:assembly; Third Party Data.
XX
OS Salmonella enterica subsp. enterica serovar Hadar
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
XX
RN [1]
RC Publication Status: Online-Only
RX PUBMED; 30286803.
RA Souvorov A., Agarwala R., Lipman D.J.;
RT "SKESA: strategic k-mer extension for scrupulous assemblies";
RL Genome Biol. 19(1):.
XX
RN [2]
RG NCBI Pathogen Detection Project
RA ;
RT ;
RL Submitted (27-JUL-2018) to the INSDC.
RL National Center for Biotechnology Information, National Library of
RL Medicine, National Institutes of Health, Bldg 45, Center Drive, Bethesda,
RL MD, USA
XX
DR MD5; d39561757081533a59dc901863e8b9b3.
DR BioSample; SAMN06030042.
XX
FH Key Location/Qualifiers
FH
FT source 1..3546
FT /organism="Salmonella enterica subsp. enterica serovar
FT Hadar"
FT /host="Homo sapiens"
FT /isolate="10-4540"
FT /mol_type="genomic DNA"
FT /country="Canada"
FT /collected_by="NML"
FT /serovar="Hadar"
FT /db_xref="taxon:149385"
FT /submitter_seqid="SAMN06030042-rid5757913.denovo.004"
FT CDS complement(DAARRO010000004.1:142616..146161)
FT /codon_start=1
FT /transl_table=11
FT /gene="recB"
FT /locus_tag="G3991_000718"
FT /product="exodeoxyribonuclease V subunit beta"
FT /note="Derived by automated computational analysis using
FT gene prediction method: Protein Homology."
FT /inference="COORDINATES: similar to AA
FT sequence:RefSeq:NP_457387.1"
FT /protein_id="HAE3645169.1"
FT /translation="MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLG
FT GSAAFPRPLTVEELLVVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEI
FT SDKKQAAQWLLLAERQMDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQA
FT CADFWRRHCYPLPRDIAQVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRH
FT EQILARINQVKQQWCEAVSELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQ
FT LPEALGKFSQRFLAERTKAGGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVA
FT QEKRRRGELGFDDMLSRLDTALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRR
FT IWRHQPDTALLLIGDPKQAIYAFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVN
FT KLFSQMNDAFMFRDIPFSPVKFAPRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSY
FT MAQVCATQIRDWLRAGQTGDALLTNGDSSRPVRASDISVLVRSRREAALIRDALTLLAI
FT PSVYLSNRDSVFETLEAQEMLWVLQAVMAPERENTLRSALATSMMGLTALDIETLNNDE
FT NAWDAVVEEFDGYRQIWHKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELL
FT QEAGSQLESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIVTIHKSKGLEYPLVW
FT LPFITHFRVQDQAFYHDRHSYEAVLDLSHAEESIALAEAERLAEDLRLLYVALTRAVWH
FT CSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPMDAAGLRACIEALCDEDIVCRTPG
FT NTDNDRWQIAAASHAELSARTLQRLLYDSWRVTSYSGLQQRGHSVAQDLIPRLDIDAAG
FT VGEAAEAPAMTPHHFPRGASPGTFLHSLFEELDFTQPIDPQWVQEKLELSGFETRWEPV
FT LTRWLDTVLHVPLNETGVSLSVLTEREKQVEMEFYLPIAQPLTAGELDALIRRYDPLSA
FT GCPALDFMQVRGMLKGFIDLVFRYEGRYYLLDYKSNWLGEDSAAYTQTAMAAAMQAHRY
FT DLQYQLYTLALHRYLRHRMANYDYERHFGGVIYLFLRGVDSERPQQGIFTTRPAAALIN
FT QLDDMFAGEMSEEAQ"
XX
SQ Sequence 3546 BP; 781 A; 916 C; 1055 G; 794 T; 0 other;
atgaatgatg tcgccgagac tcttgatcct ctgcgcttgc ccctgacagg cgagcgtttg 60
attgaagcat cagcgggcac aggcaaaacg tttactatcg cggcgctgta tctgcggtta 120
ttgctcggtt taggcggcag tgccgcattt ccccgtccgt tgaccgttga agaactgctg 180
gtggtaacct ttacggaggc cgccactgaa gagctgcgtg ggcgaatccg cagtaatatc 240
catgagttgc gcatcgcctg tctgcgggaa agcacggata atccgcttta tgcccgcttg 300
ctggaagaaa ttagcgacaa aaagcaggcc gcgcagtggt tattactggc ggaacgacaa 360
atggacgagg ccgcggtctt taccatccac ggtttttgcc agcgtatgct cagcctgaac 420
gctttcgaat ccggtatgtt gtttgagcaa cagcttattg aagacgaatc tttgttgcgt 480
tatcaggcct gcgccgattt ctggcggcgt cattgctatc cgctgccgcg cgacatcgcg 540
caggtggtgt ttgacgtgtg gaagggaccg aaggcgctct taaaggatat cgatcgttat 600
ctgcagggcg aagcgccggt cattaaagcg ccgccatcgc aggaggagac gctggcatcg 660
cgtcatgaac agatcctggc gcgtatcaac caggtgaagc agcagtggtg tgaggcggtt 720
agcgagctgg acgcgctaat cgaatcatcc ggcatcgatc gcagaaaatt caaccgcggc 780
aatcaggcga aatggatcga aaagatcacc gcgtgggcgc aagaagagac taaaaattat 840
caattacccg aggcgttggg aaaattttca cagcgttttt tagctgagcg caccaaagct 900
ggcggcgtga cgccccagca cccattgttt gtcgccattg ataacctgtt gggcgaaccg 960
ctatcgatta aagatctggt tcttacccga gcgctctcag agatccgtga aacggtggct 1020
caggaaaaac gccggcgcgg tgagctgggg tttgacgata tgctcagccg tttagatacc 1080
gcgctgcgta gtgaaagcgg cgaggcgctg gctgcggcga ttcgtacccg ttttccggtg 1140
gcgatgatcg atgaatttca ggataccgac ccacaacagt accgtatttt tcgccgtatc 1200
tggcgacatc aacccgatac ggcgctattg ctgattggcg atcctaaaca ggcgatttat 1260
gcgtttcgtg gcgcggatat ctttacctac atgaaggccc gcagcgaagt gagcgcgcac 1320
tatacgcttg acactaactg gcgctccgcg ccggggatgg tgaatagcgt taacaagctg 1380
ttcagtcaga tgaatgacgc ctttatgttc cgcgatattc ccttcagtcc ggtaaagttt 1440
gcgcccagaa accagtcgct gcaatttaaa gtgaatgacg cgcctcaacc ggcgatgacc 1500
ctgtggctaa tggaggggga aagctgcggt tcgggcgatt atcaaagtta tatggcgcag 1560
gtgtgcgcca cgcaaattcg cgactggctg cgcgccgggc aaacgggcga cgcgctgctg 1620
acgaacggcg attcgtcgcg gcccgttcgc gcctcggata tcagcgtgtt ggtgcgcagc 1680
aggcgggaag ccgcgctgat acgggatgcg ctgaccttac tggcgatccc ctccgtctat 1740
ctttctaacc gcgacagcgt attcgaaacg ctcgaagcgc aggaaatgct gtgggtgttg 1800
caggcggtga tggcgcccga acgtgaaaat acgttgcgta gcgctctggc gacatcaatg 1860
atgggcctta ccgcgctgga tatcgaaacg cttaacaatg atgaaaatgc gtgggatgcg 1920
gttgttgaag agtttgatgg ctaccgacag atttggcata aacgcggcgt gatgcctatg 1980
ctgcgcgcgc taatgtcggc gcgcaatatt gctgaaaacc tgctggcgac ggcgggaggc 2040
gaacgtcggc tgacggatat tctgcatatt agcgaactgt tacaggaagc cggttcgcag 2100
ctggaaagcg aacatgcgct ggtgcgttgg ctggcgcaac atatccttga acccgatagc 2160
aatgcttcca gccagcaact acgtctggaa agcgataagc atctggtgca aatcgtcacc 2220
attcataaat cgaaaggtct ggaatacccg ctggtctggt taccttttat cacccatttc 2280
cgcgtgcagg accaggcttt ttatcacgac aggcactcct acgaggcggt gctggacctt 2340
agtcacgccg aagagagcat agcactggcg gaagccgaac gcctggcgga agacctgcgc 2400
ctactttatg tcgcgctgac ccgtgcagtg tggcattgca gcctcggcgt cgcgccgctg 2460
gtgcggcgtc gcagtgataa aaaaggcgag acggatgtgc accaaagcgc gcttgggcga 2520
ctcctgcaaa aaggcgaacc gatggatgcc gcaggccttc gcgcctgtat tgaggcgcta 2580
tgcgacgagg atatcgtgtg tcgaacgcca ggcaatacgg ataacgaccg ctggcaaatt 2640
gccgctgcat cgcacgcgga actcagcgcc agaacgctgc aacgcctgct ttatgatagc 2700
tggcgcgtca ccagttattc cggtttgcag cagcggggac atagcgtggc gcaagatctt 2760
attcctcgtc tcgacattga cgccgcaggc gttggcgaag cggcggaagc gccggcaatg 2820
acgccgcatc actttcctcg cggggcatct ccgggaacat ttttgcacag cctgtttgaa 2880
gagcttgatt ttactcaacc gatagacccc caatgggtac aggaaaaact ggagctgagt 2940
ggttttgaaa cgcgatggga gcccgtactt acccgctggc tggacaccgt gttacacgtt 3000
ccccttaacg agacgggcgt tagtctgagc gtgctgaccg agcgtgaaaa acaggtcgaa 3060
atggagtttt atctgccgat tgcccagccg cttaccgccg gagagctgga tgcgttgatt 3120
cgtcggtacg acccgctttc agcaggttgc cctgcgctgg atttcatgca ggttcgcggc 3180
atgttaaagg gttttatcga cctggtgttc cgttatgagg ggcgctatta cctgctcgac 3240
tataaatcta actggctggg cgaggatagc gccgcttata cccagacggc gatggctgcg 3300
gctatgcagg cgcatcgcta tgatttgcag taccagcttt atacgctggc attgcaccgt 3360
taccttcgtc atcgcatggc gaattacgac tatgaacgcc atttcggcgg cgtcatctat 3420
ctctttttac gcggggtgga tagcgaacgt ccgcagcagg gtatttttac cactcgtcct 3480
gcggcggcgt taattaacca actggatgat atgtttgcag gtgaaatgag tgaggaggcg 3540
caatga 3546
//