ID   HM060617; SV 1; linear; genomic DNA; STD; INV; 1168 BP.
XX
AC   HM060617;
XX
DT   05-APR-2011 (Rel. 108, Created)
DT   05-APR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Aphanipathidae sp. MRB-2010 cytochrome c oxidase subunit 3 (cox3) gene,
DE   partial cds; cox3-cox1 intergenic spacer, complete sequence; and cytochrome
DE   c oxidase subunit 1 (cox1) gene, partial cds; mitochondrial.
XX
KW   .
XX
OS   Aphanipathidae sp. MRB-2010
OC   Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Antipatharia;
OC   Aphanipathidae; unclassified Aphanipathidae.
OG   Mitochondrion
XX
RN   [1]
RP   1-1168
RA   Wagner D., Brugler M.R., Opresko D.M., France S.C., Montgomery A.D.,
RA   Toonen R.J.;
RT   "Using morphometrics, in situ observations and genetic characters to
RT   distinguish amongst commercially valuable Hawaiian black coral species; a
RT   redescription of Antipathes grandis Verrill, 1928 (Antipatharia:
RT   Antipathidae)";
RL   Unpublished.
XX
RN   [2]
RP   1-1168
RA   Brugler M.R., France S.C.;
RT   ;
RL   Submitted (05-APR-2010) to the INSDC.
RL   Biology, University of Louisiana at Lafayette, P.O. Box 42451, Lafayette,
RL   LA 70504, USA
XX
DR   MD5; 3bd2ff1cab5bdc7a81096a19bc62ce6d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1168
FT                   /organism="Aphanipathidae sp. MRB-2010"
FT                   /organelle="mitochondrion"
FT                   /isolate="P4205-7"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:795033"
FT   gene            <1..124
FT                   /gene="cox3"
FT   CDS             <1..124
FT                   /codon_start=2
FT                   /transl_table=4
FT                   /gene="cox3"
FT                   /product="cytochrome c oxidase subunit 3"
FT                   /db_xref="GOA:F2VZ08"
FT                   /db_xref="InterPro:IPR000298"
FT                   /db_xref="InterPro:IPR013833"
FT                   /db_xref="InterPro:IPR024791"
FT                   /db_xref="InterPro:IPR035973"
FT                   /db_xref="UniProtKB/TrEMBL:F2VZ08"
FT                   /protein_id="ADI46565.1"
FT                   /translation="LISHQFTRHHHIGFEAASWYWHFVDVVWLFLYICIYWWGS"
FT   misc_feature    125..383
FT                   /note="cox3-cox1 intergenic spacer"
FT   gene            384..>1168
FT                   /gene="cox1"
FT   CDS             384..>1168
FT                   /codon_start=1
FT                   /transl_table=4
FT                   /gene="cox1"
FT                   /product="cytochrome c oxidase subunit 1"
FT                   /db_xref="GOA:F2VZ09"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:F2VZ09"
FT                   /protein_id="ADI46566.1"
FT                   /translation="MISEFLTRWVFSTNHKDIGTLYLVFGIGSGMIGTALSMLIRLELS
FT                   APGTMLGDDHLYNVIVTAHALIMIFFLVMPVMIGGFGNWLVPLYIGAPDMAFPRLNNIS
FT                   FWLLPPALILLLGSSFVEQGVGAGWTIYPPLSSIQAHSGGAVDMAIFSLHLAGASSILG
FT                   AMNFITTILNMRAPGVTMDRLPLFVWSILITAFLLLLSLPVLAGAITMLLTDRNFNTTF
FT                   FDPAGGGDPILFQHLFWFFGHPEVYILILPGFGMVSQIVP"
XX
SQ   Sequence 1168 BP; 317 A; 194 C; 240 G; 417 T; 0 other;
     attgatttct catcaattca ctcgtcatca ccatattggg tttgaagctg caagttggta        60
     ttggcatttt gtggatgtag tttggttatt tttatatatt tgtatatatt gatgggggtc       120
     ttagtgacga atatataaag gagaaatctg tgaggctttt ctccctaata tatttatttg       180
     ataaaagcaa gttaagaaaa ttaaattctt tatatgaagt ggtattctat tgtataaatt       240
     caatttgtga gggttgtagc tattaggaag ttagacaacc gctcgcaaat gtcttactta       300
     gagggcccct gattacaact agaagtttag tttatataca cggtgtaggg ctaaaagttt       360
     tacacccgat cccgggctat tggatgataa gtgaattttt aactcgttga gttttttcca       420
     caaaccataa agatatcggc acattatatc tagtatttgg aatagggtcc ggtatgatag       480
     gtacagcttt aagtatgttg ataagattag aattatctgc tcctggcact atgttaggag       540
     atgaccacct ttataatgtt atagtaacag cacatgctct tattatgatt tttttcctag       600
     tcatgccagt tatgatagga ggatttggga attggctagt gccactatat attggagcac       660
     ctgatatggc ttttccacga cttaataata taagtttttg gttactaccc cctgctttaa       720
     tactattatt agggtcctca tttgtagaac aaggagttgg ggccggatga acaatatatc       780
     ctcctttatc cagcattcaa gcacattctg ggggagccgt cgatatggct atttttagtc       840
     tccatctagc gggtgcttct tccatattgg gggcaatgaa ctttataact accatattaa       900
     atatgagggc cccaggagta acaatggata gattgccact ttttgtgtgg tctatactaa       960
     taactgcttt tctactacta ctatctctac cggtgttagc tggggctata actatgcttt      1020
     tgacagatag aaattttaat accacttttt ttgatcccgc gggaggggga gacccgattt      1080
     tatttcaaca tttattttgg ttctttggcc acccagaggt ttacattttg attttaccag      1140
     gctttggaat ggtctctcaa atagtacc                                         1168
//