ID HM172073; SV 1; linear; viral cRNA; STD; VRL; 1707 BP. XX AC HM172073; XX DT 11-AUG-2010 (Rel. 105, Created) DT 11-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Influenza A virus (A/chicken/Shandong/A-10/2006(H5N1)) segment 4 DE hemagglutinin (HA) gene, complete cds. XX KW . XX OS Influenza A virus (A/chicken/Shandong/A-10/2006(H5N1)) OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Alphainfluenzavirus. XX RN [1] RP 1-1707 RX DOI; 10.1128/JVI.00413-10. RX PUBMED; 20538856. RA Li Y., Shi J., Zhong G., Deng G., Tian G., Ge J., Zeng X., Song J., RA Zhao D., Liu L., Jiang Y., Guan Y., Bu Z., Chen H.; RT "Continued evolution of H5N1 influenza viruses in wild birds, domestic RT poultry, and humans in China from 2004 to 2009"; RL J. Virol. 84(17):8389-8397(2010). XX RN [2] RP 1-1707 RA Li Y., Shi J., Zhong G., Deng G., Tian G., Ge J., Zeng X., Song J., RA Zhao D., Liu L., Jiang Y., Guan Y., Bu Z., Chen H.; RT ; RL Submitted (29-APR-2010) to the INSDC. RL National Avian Influenza Reference Laboratory & Animal Influenza Laboratory RL of the Ministry of Agriculture, Harbin Veterinary Research Institute, CAAS, RL 427 Maduan Street, Harbin, Heilongjiang 150001, P.R. China XX DR MD5; 682ac68e5d5001485dcc8c07885e147c. XX CC GenBank Accession Numbers HM172274, HM172418, HM172073, HM172376, CC HM172212, HM172139, HM172244, HM172327 represent sequences from the CC 8 segments of Influenza A virus CC (A/chicken/Shandong/A-10/2006(H5N1)). XX FH Key Location/Qualifiers FH FT source 1..1707 FT /organism="Influenza A virus FT (A/chicken/Shandong/A-10/2006(H5N1))" FT /segment="4" FT /host="chicken" FT /strain="A/chicken/Shandong/A-10/2006" FT /serotype="H5N1" FT /mol_type="viral cRNA" FT /country="China:Shandong" FT /collection_date="2006" FT /db_xref="taxon:762394" FT gene 1..1707 FT /gene="HA" FT CDS 1..1707 FT /codon_start=1 FT /gene="HA" FT /product="hemagglutinin" FT /db_xref="GOA:D9ZX97" FT /db_xref="InterPro:IPR000149" FT /db_xref="InterPro:IPR001364" FT /db_xref="InterPro:IPR008980" FT /db_xref="InterPro:IPR013828" FT /db_xref="UniProtKB/TrEMBL:D9ZX97" FT /protein_id="ADG59049.1" FT /translation="MEKIVLLLAIIGLVKSDQICVGYHANNSTEQVDTIMEKNVTVTHA FT QDILEKTHNGKLCNLDGVKPLILKDCSVAGWLLGNPMCDEFLNVSEWSYIVEKASPANG FT LCYPGDLNDYEELKHLLSRINHFEKIKIIPKSSWSNHEASLGVSSACSYLGKPSFFRNV FT VWLIKKNNTYPPIKVNYTNANQEDLLVLWGIHHPNDEAEQIMIYQNPTTYISVGTSTLN FT QRLVPKIATRSKVNGQSGRLEFFWTILKPNDTINFDSNGNFIAPEYAYKIVKKGDSAIM FT KSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNAPQRG FT RRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGITNKVN FT SIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHD FT SNVKNLYEKVRLQLKDNAKELGNGCFEFYHKCDNECMESVKNGTYDYPQYSEEARLNRE FT KISGVKLESTVTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRICI" XX SQ Sequence 1707 BP; 591 A; 321 C; 388 G; 407 T; 0 other; atggagaaaa tagtgcttct tcttgcaata atcggtcttg ttaaaagtga tcagatttgc 60 gttggttacc atgcaaacaa ctcgacagag caggttgaca caataatgga aaagaacgtt 120 actgttacac atgctcaaga catactggag aagacacaca acgggaagct ctgcaaccta 180 gatggagtga agcctctaat tttgaaagat tgtagtgtag ctggatggct cctcggaaac 240 ccaatgtgtg acgaatttct caatgtgtcg gaatggtctt acatagtgga gaaggccagt 300 ccagccaatg gcctctgtta cccaggggat ctcaatgact atgaagaact gaaacaccta 360 ttgagcagaa taaaccattt tgagaaaatt aagatcatcc ccaaaagttc ttggtccaat 420 catgaagcct cattaggggt gagctcagca tgttcctatc tggggaagcc ctcctttttc 480 agaaatgtgg tatggcttat caaaaagaac aatacttacc caccaataaa ggtgaactac 540 accaatgcca accaagaaga tcttttggta ctttggggga ttcaccatcc caatgatgaa 600 gcagagcaga taatgatcta tcaaaaccca accacctata tttccgttgg aacatcaaca 660 ctaaaccaga gattggtacc aaaaatagct actagatcca aagtgaacgg gcaaagtgga 720 agactggagt tcttctggac aattttaaag ccgaatgata ctatcaattt cgatagtaat 780 ggaaatttca ttgctccaga gtatgcatac aaaattgtca agaaagggga ctcggcgatt 840 atgaaaagtg aattggaata tggtaactgc aacaccaagt gtcaaactcc aatgggggcg 900 ataaattcta gtatgccatt ccacaacata caccctctca ccatcgggga atgccccaaa 960 tatgtgaaat caaacagatt agtcctcgca actggactca gaaatgcccc tcagagaggg 1020 agaagaagaa aaaaaagagg actatttgga gccatagcag ggtttataga gggaggatgg 1080 cagggaatgg tagatggctg gtatgggtac caccatagca atgagcaggg gagtggatac 1140 gctgcagaca aagaatccac tcaaaaggca atagatggaa tcaccaataa ggtcaactcg 1200 atcattgaca aaatgaacac tcagtttgag gccgttggaa gggaatttaa taacttagaa 1260 aggagaatag aaaatttaaa caaaaagatg gaggacggat tcctagatgt ctggacttat 1320 aacgctgaac ttctggttct catggaaaat gagagaactc tagactttca tgactcaaat 1380 gtcaagaacc tttacgaaaa ggtccgacta cagcttaagg ataatgcaaa ggagctgggt 1440 aacggttgtt tcgagttcta ccacaaatgt gataatgaat gtatggaaag tgtaaaaaac 1500 ggaacgtatg actacccgca gtactcagag gaagcaagat taaacagaga gaaaataagt 1560 ggagtaaaat tggaatcaac agtaacttac caaatactgt caatttattc aacagtggcg 1620 agttccctag cactggcaat catggtggct ggtctatctt tatggatgtg ctccaatgga 1680 tcgttacaat gcagaatttg catttga 1707 //