ID   JN025102; SV 1; linear; genomic DNA; STD; VRT; 581 BP.
XX
AC   JN025102;
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PR   Project:PRJNA37833;
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DT   19-JUL-2011 (Rel. 109, Created)
DT   06-NOV-2011 (Rel. 110, Last updated, Version 3)
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DE   Cottus gulosus voucher NAFF 935 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
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KW   BARCODE.
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OS   Cottus gulosus (riffle sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
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RN   [1]
RP   1-581
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
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RN   [2]
RP   1-581
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
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DR   MD5; 129fc762edc5e02d3e79b2c804c5719d.
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CC   ##International Barcode of Life (iBOL)Data-START##
CC   Barcode Index Number :: BOLD:AAD1276
CC   Order Assignment     :: Scorpaeniformes
CC   iBOL Working Group   :: iBOL:WG1.1
CC   iBOL Release Status  :: Phase 2
CC   ##International Barcode of Life (iBOL)Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..581
FT                   /organism="Cottus gulosus"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Oregon, Lane, Siuslaw River"
FT                   /lat_lon="43.85 N 123.36 W"
FT                   /specimen_voucher="NAFF 935"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304276"
FT   gene            <1..>581
FT                   /gene="COI"
FT   CDS             <1..>581
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWP2"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWP2"
FT                   /protein_id="AEK01726.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLFLPVLAAGITMLLT"
XX
SQ   Sequence 581 BP; 132 A; 170 C; 104 G; 174 T; 1 other;
     ctatatctag tatttggtgc ntgagccgga atagtaggca cagccttaag cctcctaatt        60
     cgagcagaac taagccaacc cggcgccctt ttgggggacg accagattta taatgtaatt       120
     gttacggccc atgctttcgt aataattttc tttatagtaa taccaattat aatcgggggt       180
     ttcgggaact gactcatccc cttaatgatc ggcgcccctg atatggcctt tcctcgaata       240
     aacaatatga gcttttgact tcttccccca tcttttttac tcctcctagc ctcttcgggg       300
     gtcgaagcag gagccggaac cggatgaaca gtttacccac ccctcgccgg gaacctcgcc       360
     cacgcaggag cctctgttga cctaacgatc ttctcccttc acctagcagg tatctcttct       420
     attcttggag caatcaactt tatcacaact atcattaata tgaaaccccc tgctatttct       480
     caataccaga cccctctatt cgtatgatct gttcttatta ctgctgtcct actgcttctt       540
     ttcctccccg tacttgccgc cggcatcaca atgctcctaa c                           581
//